LOC110530121 (LOC106568956)


Basic Information

Item Value
gene id LOC110530121
gene name LOC106568956
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 53965997 ~ 53995304 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985678.1
TACTTCATTAGTGTTGCTGATGAGACGCTATTCACTTTATTACACATTCTGGGCCATGGACGCAACCTTTAGCACTAGTAATATTTGTTTTttaatagctagctaataaagccAAGGATAGTTGGGGAAATAAGTAGTAGCCGGATTGGTTGCAGAGTCTGGTCGAGGCTGGTTGGCCGGTGAATGCACAGAGTGAAGAAAGTGAAGCGTGGGAACAAAACAGAAGGTTACTGGAAAAGttGTTTAGAAGTTAATATGACGGCGGTGGACGGGCTAACAGAGAGCACAGAGGTGGTGGAGATGGAGGACGTCCCGTCTCAGTTCTACGTGGAAAAGCACTCGTGGGATGGCCTGCGTGACATCATCCACAGCAGCAGGAAGTACTCGGGAATGATCGCCAACAAAGCGCCCCATGACTTCCAGTTTGTGCAGAAAAACGATGAGTCAGGCCCCCACTCCCATCGCCTGTACTACCTCGGGATGTCTTACGGAAGTAGAGAGAACTCACTGCTCTACTCCGAAATCCCCAAGAAGATCCGGAAAGAGGCCCTCTTGGTGTTGTCGTGGAAACAGATGCTGGATCACTTCCAGGCCACCCCGCACCAGGGGGCCTATTCCCGGGAGGAGGAGCTGCTTCGGGAGCGTAAGCGTCTGGGAGCGTTTGGGATCACCTCCTACGACTACCACTCCCAGACCGGCCTGTTCCTCTTCCAGGCCAGCAACAGCCTCTTCTATTGTCAGGACGGGGGAAACAACGGCTTCATTCAGTCTGCCCCAATGAAGCCGGTGGAGATTAAGACACAGTGCTCAGGGACCCGCATGGACCCCAAGATCTCCCCAGGAGAGCCCAACTTCATTGCATTTATCAACAACAATGACCTGTGGCTGGCTAACATCAagtctggggaggagaggagactcaCCTTCTGTCACAAAGGTCTGGATAATGTGAAGGAGGACCCCAAGTCTGCGGGCGTGGCCACGTTTGTGATCCAGGAGGAGTTTGATCGCTTCACTGGCTACTGGTGGAGTCCATCTGCCGTAGATGACTCAGATGGGGGGAAAACCCTGCATCTGCTGTATGAAGAGGTGGATGAGACGGAGGTAGAGATCATTCATGTTCCCTCTCCAGCCCTGGAGGAGCGGAAGGCCGATGCCTACAGATACCCCCGCACAGGCAGTAAAAATCCACAAACCACCCTCAAACTGGCAGAGATAAAGACTAACAACCAAGGCAAAatCATGAGCATCCAAGACAAGGAGCTGGTTCTCCCCTTCACCACCCTGTTCCCCGGGGCGGAGTACATCGCCCGGGCAGGATGGACGAGTGACGGCAAATATGGTTGGGCCGTGCTGCTGGACCGCAGTCAGAAGAGGCTCCAGCTGGTCCTGCTTCCCCCGGCCCTCTTCATCCCCATCACAGACGACCCGGCCCAGAGACAGGAGAGCCTGGAGGCCGTGCCCGAGGACGTCCACCCTTACATTGTCTACGAGGAGACCACCGACATCTGGATCAATGTTCATGATATTTTCTATCCGTTCGTTCAAACGTCCGAGGACGACTTCTCCTTCATATGGGTGAATGAATCCAAAACGAGCTTCAGCCATCTGTACAAAATCACGTCAACTTTGCGACCAGGCTGCTACCAATGGTCAGGAAACTACACACATACAGAGGGAGACTTTAAATGTGCAATCAAGGAGGAGGTGACTCTGACCAGTGGAGAGTGGGAGGTGTTGGCCAGGCATGGCTCCAAGATCTGGGTGAATGAGGCCTCTAAGCTGGTGTACTTCCAGGGCACTAGAGACACTCCCCTGGAGCACCACCTCTATGTGGTCAGCTATCAGTCCCCTGGCGACGTGGTCAGACTCACCAAGCCTGGCTTCTCCCACAGCTGCTCCATAAGTAAGAACTTTGACATGTTTGTCAGCCACTACAGTAACGTAAGCACTCCCCCCTGTGTCCACGTCTACAAGCTGACCGCCTCAGAGGGAGACCCTCTCCACATGGTGCCTGAGTTCTGGGCCAGCATGATGGAAGCCCCAGGTTGCCCAGGAGACTACAAATCTCCGGAGATCTTTGACTTCCCAGGAAAGTCGGGCTTCCAGCTCTACGGAATGGTGTACAAGCCTCACAACCTCCAGCCTGGCAAGAAGCATCCCACAGTCCTCTTTGTCTATGGTGGCCCGCAGGTCCAATTGGTGAATAACTCATTCAAGGGGATGAAATACCTGCGCCTCAACACCCTGGCCTCCCTGGGATACGCCGTGGTGGTCATCGACGGGAGGGGCTCCTGTCAGAGGGGCCTGGAGTTTGAAGGGGCTCTGAAAAACAAAATGGGCCAGGTGGAGATCGAGGACCAGGTGGAGGGGCTGCAGTACGTGTCGGAGAGGTTCAACTTTGTGGACCTGAGCCGCGTGGCCATCCACGGCTGGTCCTACGGCGGCTTCCTCTCCCTCATGGGCCTCATCCAGAGGCCCAACGTCTTCAAGGTGGCCATAGCGGGTGCCCCGGTGACCGTGTGGATGGCGTACGACACGGGCTACACGGAGCGCTACATGGATACTCCTGAGAACAACCCGCAGGGCTACGAGGAGGGCTCTGTGGCTCTGCACGTGGACAAACTGCCCAGCGAGCCAAACCGCTTGCTGATTCTACACGGATTCCTCGACGAGAATGTGCACTTTTTCCACACCAACTTCCTGGTGTCACAAATAATCCGCGCTGGGAAGCCATATCAGCTACAGGTCTACCCCAACGAGCGACACAGTATTCGCTGCCCAGAGTCAGGAGAACACTATGAGATCATGCTGCTGCACTTTCTACAACAATACCTCTGAAAACggggtgaacccccccccccccccccgataacCCCTCAACCTTGGCATAGAGACCTCGCACTCTGCAGCCACACCCATCCACCCCACATTTACCGTGAACTGGAGATCTCACTCCATTAtgcctccacctctctccctctctctttctctgttgctagctctctccttctctctttctctgttgcctgctctctctctctctcccattctccctttctctcgcccCTACATTAGGGTGGGGGATATGGTTAGGTTACCTAAGGTGATCCAAGGCAGTGTTATCAAGTTTCACTGTGGAATGAAAGGAGGACAACATTATCTGGAGGCTGAGCCGCAATCACTCTCCCTTGTTTTCCTCTTCACTGGAGCCATGATTGTTTTGCCAAATGTTTTTCTTTTTCCTACATTTTATTCACTCGAGTCAGTAGTAGGAGTGGGGTTCCTCAAACAGGAAATCTAGACAGGAatctagacaggcagacagaaagaaTATAGCTATAATACTTACTGTGAGTTTAAGCCTTGGAGGTGGTGTGTAATGGCTAGAGGAAGAGACCCTGCCTCTACTTGCATTCATTAACTATTTTAAGTGTGTATTGTTCAAATAAAATATTTGTATGGATTCTTATTATTTTATAATGAGCGTCAAACGAAGTCCCTCATTGATATAAAGTCATTTTTGCGCCCTTTCTCTAATCCCGCCTCGCATTACATTGCTCAAGGTGTCGGCTTGCCCTCTGAAGATACAATATTTGCCAAAGTACTTCTGACTTCTGATCATGctgttattttcttttttttactgcaATAACGATGCAAGTGTGAGCAGCCGAGTCTTAAACAGCTTTTTACCACCCGAATCAAATTTATACATGACGATGAATAAATGTATAATGAAATCTC
>XM_036985679.1
TACTTCATTAGTGTTGCTGATGAGACGCTATTCACTTTATTACACATTCTGGGCCATGGACGCAACCTTTAGCACTAGTAATATTTGTTTTttaatagctagctaataaagccAAGGATAGTTGGGGAAATAAGTAGTAGCCGGATTGGTTGCAGAGTCTGGTCGAGGCTGGTTGGCCGGTGAATGCACAGAGTGAAGAAAGTGAAGCGTGGGAACAAAACAGAAGGTTACTGGAAAAGttGTTTAGAAGTTAATATGACGGCGGTGGACGGGCTAACAGAGAGCACAGAGGTGGTGGAGATGGAGGACGTCCCGTCTCAGTTCTACGTGGAAAAGCACTCGTGGGATGGCCTGCGTGACATCATCCACAGCAGCAGGAAGTACTCGGGAATGATCGCCAACAAAGCGCCCCATGACTTCCAGTTTGTGCAGAAAAACGATGAGTCAGGCCCCCACTCCCATCGCCTGTACTACCTCGGGATGTCTTACGGAAGTAGAGAGAACTCACTGCTCTACTCCGAAATCCCCAAGAAGATCCGGAAAGAGGCCCTCTTGGTGTTGTCGTGGAAACAGATGCTGGATCACTTCCAGGCCACCCCGCACCAGGGGGCCTATTCCCGGGAGGAGGAGCTGCTTCGGGAGCGTAAGCGTCTGGGAGCGTTTGGGATCACCTCCTACGACTACCACTCCCAGACCGGCCTGTTCCTCTTCCAGGCCAGCAACAGCCTCTTCTATTGTCAGGACGGGGGAAACAACGGCTTCATTTCTGCCCCAATGAAGCCGGTGGAGATTAAGACACAGTGCTCAGGGACCCGCATGGACCCCAAGATCTCCCCAGGAGAGCCCAACTTCATTGCATTTATCAACAACAATGACCTGTGGCTGGCTAACATCAagtctggggaggagaggagactcaCCTTCTGTCACAAAGGTCTGGATAATGTGAAGGAGGACCCCAAGTCTGCGGGCGTGGCCACGTTTGTGATCCAGGAGGAGTTTGATCGCTTCACTGGCTACTGGTGGAGTCCATCTGCCGTAGATGACTCAGATGGGGGGAAAACCCTGCATCTGCTGTATGAAGAGGTGGATGAGACGGAGGTAGAGATCATTCATGTTCCCTCTCCAGCCCTGGAGGAGCGGAAGGCCGATGCCTACAGATACCCCCGCACAGGCAGTAAAAATCCACAAACCACCCTCAAACTGGCAGAGATAAAGACTAACAACCAAGGCAAAatCATGAGCATCCAAGACAAGGAGCTGGTTCTCCCCTTCACCACCCTGTTCCCCGGGGCGGAGTACATCGCCCGGGCAGGATGGACGAGTGACGGCAAATATGGTTGGGCCGTGCTGCTGGACCGCAGTCAGAAGAGGCTCCAGCTGGTCCTGCTTCCCCCGGCCCTCTTCATCCCCATCACAGACGACCCGGCCCAGAGACAGGAGAGCCTGGAGGCCGTGCCCGAGGACGTCCACCCTTACATTGTCTACGAGGAGACCACCGACATCTGGATCAATGTTCATGATATTTTCTATCCGTTCGTTCAAACGTCCGAGGACGACTTCTCCTTCATATGGGTGAATGAATCCAAAACGAGCTTCAGCCATCTGTACAAAATCACGTCAACTTTGCGACCAGGCTGCTACCAATGGTCAGGAAACTACACACATACAGAGGGAGACTTTAAATGTGCAATCAAGGAGGAGGTGACTCTGACCAGTGGAGAGTGGGAGGTGTTGGCCAGGCATGGCTCCAAGATCTGGGTGAATGAGGCCTCTAAGCTGGTGTACTTCCAGGGCACTAGAGACACTCCCCTGGAGCACCACCTCTATGTGGTCAGCTATCAGTCCCCTGGCGACGTGGTCAGACTCACCAAGCCTGGCTTCTCCCACAGCTGCTCCATAAGTAAGAACTTTGACATGTTTGTCAGCCACTACAGTAACGTAAGCACTCCCCCCTGTGTCCACGTCTACAAGCTGACCGCCTCAGAGGGAGACCCTCTCCACATGGTGCCTGAGTTCTGGGCCAGCATGATGGAAGCCCCAGGTTGCCCAGGAGACTACAAATCTCCGGAGATCTTTGACTTCCCAGGAAAGTCGGGCTTCCAGCTCTACGGAATGGTGTACAAGCCTCACAACCTCCAGCCTGGCAAGAAGCATCCCACAGTCCTCTTTGTCTATGGTGGCCCGCAGGTCCAATTGGTGAATAACTCATTCAAGGGGATGAAATACCTGCGCCTCAACACCCTGGCCTCCCTGGGATACGCCGTGGTGGTCATCGACGGGAGGGGCTCCTGTCAGAGGGGCCTGGAGTTTGAAGGGGCTCTGAAAAACAAAATGGGCCAGGTGGAGATCGAGGACCAGGTGGAGGGGCTGCAGTACGTGTCGGAGAGGTTCAACTTTGTGGACCTGAGCCGCGTGGCCATCCACGGCTGGTCCTACGGCGGCTTCCTCTCCCTCATGGGCCTCATCCAGAGGCCCAACGTCTTCAAGGTGGCCATAGCGGGTGCCCCGGTGACCGTGTGGATGGCGTACGACACGGGCTACACGGAGCGCTACATGGATACTCCTGAGAACAACCCGCAGGGCTACGAGGAGGGCTCTGTGGCTCTGCACGTGGACAAACTGCCCAGCGAGCCAAACCGCTTGCTGATTCTACACGGATTCCTCGACGAGAATGTGCACTTTTTCCACACCAACTTCCTGGTGTCACAAATAATCCGCGCTGGGAAGCCATATCAGCTACAGGTCTACCCCAACGAGCGACACAGTATTCGCTGCCCAGAGTCAGGAGAACACTATGAGATCATGCTGCTGCACTTTCTACAACAATACCTCTGAAAACggggtgaacccccccccccccccccgataacCCCTCAACCTTGGCATAGAGACCTCGCACTCTGCAGCCACACCCATCCACCCCACATTTACCGTGAACTGGAGATCTCACTCCATTAtgcctccacctctctccctctctctttctctgttgctagctctctccttctctctttctctgttgcctgctctctctctctctcccattctccctttctctcgcccCTACATTAGGGTGGGGGATATGGTTAGGTTACCTAAGGTGATCCAAGGCAGTGTTATCAAGTTTCACTGTGGAATGAAAGGAGGACAACATTATCTGGAGGCTGAGCCGCAATCACTCTCCCTTGTTTTCCTCTTCACTGGAGCCATGATTGTTTTGCCAAATGTTTTTCTTTTTCCTACATTTTATTCACTCGAGTCAGTAGTAGGAGTGGGGTTCCTCAAACAGGAAATCTAGACAGGAatctagacaggcagacagaaagaaTATAGCTATAATACTTACTGTGAGTTTAAGCCTTGGAGGTGGTGTGTAATGGCTAGAGGAAGAGACCCTGCCTCTACTTGCATTCATTAACTATTTTAAGTGTGTATTGTTCAAATAAAATATTTGTATGGATTCTTATTATTTTATAATGAGCGTCAAACGAAGTCCCTCATTGATATAAAGTCATTTTTGCGCCCTTTCTCTAATCCCGCCTCGCATTACATTGCTCAAGGTGTCGGCTTGCCCTCTGAAGATACAATATTTGCCAAAGTACTTCTGACTTCTGATCATGctgttattttcttttttttactgcaATAACGATGCAAGTGTGAGCAGCCGAGTCTTAAACAGCTTTTTACCACCCGAATCAAATTTATACATGACGATGAATAAATGTATAATGAAATCTC
>XM_036985680.1
TACTTCATTAGTGTTGCTGATGAGACGCTATTCACTTTATTACACATTCTGGGCCATGGACGCAACCTTTAGCACTAGTAATATTTGTTTTttaatagctagctaataaagccAAGGATAGTTGGGGAAATAAGTAGTAGCCGGATTGGTTGCAGAGTCTGGTCGAGGCTGGTTGGCCGGTGAATGCACAGAGTGAAGAAAGTGAAGCGTGGGAACAAAACAGAAGGTTACTGGAAAAGttGTTTAGAAGTTAATATGACGGCGGTGGACGGGCTAACAGAGAGCACAGAGGTGGTGGAGATGGAGGACGTCCCGTCTCAGTTCTACGTGGAAAAGCACTCGTGGGATGGCCTGCGTGACATCATCCACAGCAGCAGGAAGTACTCGGGAATGATCGCCAACAAAGCGCCCCATGACTTCCAGTTTGTGCAGAAAAACGATGAGTCAGGCCCCCACTCCCATCGCCTGTACTACCTCGGGATGTCTTACGGAAGTAGAGAGAACTCACTGCTCTACTCCGAAATCCCCAAGAAGATCCGGAAAGAGGCCCTCTTGGTGTTGTCGTGGAAACAGATGCTGGATCACTTCCAGGCCACCCCGCACCAGGGGGCCTATTCCCGGGAGGAGGAGCTGCTTCGGGAGCGTAAGCGTCTGGGAGCGTTTGGGATCACCTCCTACGACTACCACTCCCAGACCGGCCTGTTCCTCTTCCAGGCCAGCAACAGCCTCTTCTATTGTCAGGACGGGGGAAACAACGGCTTCATTTCTGCCCCAATGAAGCCGGTGGAGATTAAGACACAGTGCTCAGGGACCCGCATGGACCCCAAGATCTCCCCAGGAGAGCCCAACTTCATTGCATTTATCAACAACAATGACCTGTGGCTGGCTAACATCAagtctggggaggagaggagactcaCCTTCTGTCACAAAGGTCTGGATAATGTGAAGGAGGACCCCAAGTCTGCGGGCGTGGCCACGTTTGTGATCCAGGAGGAGTTTGATCGCTTCACTGGCTACTGGTGGAGTCCATCTGCCGTAGATGACTCAGATGGGGGGAAAACCCTGCATCTGCTGTATGAAGAGGTGGATGAGACGGAGGTAGAGATCATTCATGTTCCCTCTCCAGCCCTGGAGGAGCGGAAGGCCGATGCCTACAGATACCCCCGCACAGGCAGTAAAAATCCACAAACCACCCTCAAACTGGCAGAGATAAAGACTAACAACCAAGGCAAAatCATGAGCATCCAAGACAAGGAGCTGGTTCTCCCCTTCACCACCCTGTTCCCCGGGGCGGAGTACATCGCCCGGGCAGGATGGACGAGTGACGGCAAATAG

Function

NR:

description
dipeptidyl peptidase 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985678.1 False 3747 mRNA 0.52 21 53965997 53995304
XM_036985679.1 False 3744 mRNA 0.52 21 53965997 53995304
XM_036985680.1 True 1338 mRNA 0.53 10 53981409 53995304
Loading

Neighbor

gene id symbol gene type direction distance location
insl3 NA coding downstream 48380 53914820 ~ 53917617 (-)
LOC110530934 LOC106568959 coding downstream 85212 53818706 ~ 53880785 (-)
ocel1 LOC106568960 coding downstream 153805 53806663 ~ 53812192 (-)
plvapa LOC106568963 coding downstream 237326 53722172 ~ 53728671 (-)
LOC110530116 tm16h coding downstream 253763 53681608 ~ 53712234 (-)
LOC110530123 rps15 coding upstream 5825 54001129 ~ 54003188 (-)
LOC118965682 NA coding upstream 7130 54002434 ~ 54002567 (-)
cnn2 cnn2 coding upstream 13130 54008434 ~ 54014434 (-)
crsp7 LOC106568954 coding upstream 29432 54024736 ~ 54039572 (-)
LOC110530125 LOC106568953 coding upstream 62818 54058122 ~ 54105410 (-)
G722699 NA non-coding downstream 590 53965176 ~ 53965407 (-)
G722696 NA non-coding downstream 11568 53954197 ~ 53954429 (-)
G722694 NA non-coding downstream 13597 53952195 ~ 53952400 (-)
G722686 NA non-coding downstream 21051 53944594 ~ 53944946 (-)
G722659 NA non-coding downstream 60535 53905148 ~ 53905462 (-)
G722728 NA non-coding upstream 37987 54033291 ~ 54034722 (-)
G722805 LOC106568951 non-coding upstream 185138 54180442 ~ 54185532 (-)
G722812 NA non-coding upstream 192765 54188069 ~ 54189214 (-)
G722814 NA non-coding upstream 194088 54189392 ~ 54243058 (-)
G722773 LOC106568951 non-coding upstream 209384 54204688 ~ 54207815 (-)
G722670 NA other downstream 38038 53926228 ~ 53927959 (-)
G722602 NA other downstream 109932 53803443 ~ 53856065 (-)
G722459 NA other downstream 466267 53495804 ~ 53499730 (-)
LOC110529122 LOC106568971 other downstream 502233 53462034 ~ 53478913 (-)
G721275 NA other downstream 1204546 52761039 ~ 52761451 (-)
G722761 NA other upstream 129075 54124379 ~ 54139341 (-)
G722854 NA other upstream 255810 54251114 ~ 54251546 (-)
G722864 LOC106581475 other upstream 286381 54281685 ~ 54281978 (-)
G723955 NA other upstream 1381977 55377281 ~ 55377776 (-)
G723966 NA other upstream 1401320 55396624 ~ 55396885 (-)

Expression

LOC110530121(LOC106568956) Expression in all Baseline Samples

Bar chart with 20 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 40.
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LOC110530121(LOC106568956) Expression in each Bioproject

Bar chart with 21 bars.
LOC110530121(LOC106568956) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
End of interactive chart.

Co-expression Network