Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110530123 |
| gene name | rps15 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 54001129 ~ 54003188 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| rps15 | Predicted to be a structural constituent of ribosome. Acts upstream of or within chordate embryonic development. Predicted to be located in ribosome. Predicted to be part of cytosolic small ribosomal subunit. Orthologous to human RPS15 (ribosomal protein S15). |
| description |
|---|
| unnamed protein product |
| id | name | namespace |
|---|---|---|
| GO:0006412 | translation | biological_process |
| GO:0015935 | small ribosomal subunit | cellular_component |
| GO:0003723 | RNA binding | molecular_function |
| GO:0003735 | structural constituent of ribosome | molecular_function |
| id | description |
|---|---|
| K02958 | RP-S15e, RPS15; small subunit ribosomal protein S15e |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021612952.2 | True | 578 | mRNA | 0.53 | 4 | 54001129 | 54003188 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530121 | LOC106568956 | coding | downstream | 5825 | 53965997 ~ 53995304 (-) |
| insl3 | NA | coding | downstream | 83512 | 53914820 ~ 53917617 (-) |
| LOC110530934 | LOC106568959 | coding | downstream | 120344 | 53818706 ~ 53880785 (-) |
| ocel1 | LOC106568960 | coding | downstream | 188937 | 53806663 ~ 53812192 (-) |
| plvapa | LOC106568963 | coding | downstream | 272458 | 53722172 ~ 53728671 (-) |
| cnn2 | cnn2 | coding | upstream | 5246 | 54008434 ~ 54014434 (-) |
| crsp7 | LOC106568954 | coding | upstream | 21548 | 54024736 ~ 54039572 (-) |
| LOC110530125 | LOC106568953 | coding | upstream | 54934 | 54058122 ~ 54105410 (-) |
| LOC110530126 | LOC106569003 | coding | upstream | 123880 | 54127068 ~ 54131739 (-) |
| LOC110530134 | LOC106568945 | coding | upstream | 371045 | 54374233 ~ 54377574 (-) |
| G722699 | NA | non-coding | downstream | 35722 | 53965176 ~ 53965407 (-) |
| G722696 | NA | non-coding | downstream | 46700 | 53954197 ~ 53954429 (-) |
| G722694 | NA | non-coding | downstream | 48729 | 53952195 ~ 53952400 (-) |
| G722686 | NA | non-coding | downstream | 56183 | 53944594 ~ 53944946 (-) |
| G722659 | NA | non-coding | downstream | 95667 | 53905148 ~ 53905462 (-) |
| G722728 | NA | non-coding | upstream | 30103 | 54033291 ~ 54034722 (-) |
| G722805 | LOC106568951 | non-coding | upstream | 177254 | 54180442 ~ 54185532 (-) |
| G722812 | NA | non-coding | upstream | 184881 | 54188069 ~ 54189214 (-) |
| G722814 | NA | non-coding | upstream | 186204 | 54189392 ~ 54243058 (-) |
| G722773 | LOC106568951 | non-coding | upstream | 201500 | 54204688 ~ 54207815 (-) |
| G722670 | NA | other | downstream | 73170 | 53926228 ~ 53927959 (-) |
| G722602 | NA | other | downstream | 145064 | 53803443 ~ 53856065 (-) |
| G722459 | NA | other | downstream | 501399 | 53495804 ~ 53499730 (-) |
| LOC110529122 | LOC106568971 | other | downstream | 537365 | 53462034 ~ 53478913 (-) |
| G721275 | NA | other | downstream | 1239678 | 52761039 ~ 52761451 (-) |
| G722761 | NA | other | upstream | 121191 | 54124379 ~ 54139341 (-) |
| G722854 | NA | other | upstream | 247926 | 54251114 ~ 54251546 (-) |
| G722864 | LOC106581475 | other | upstream | 278497 | 54281685 ~ 54281978 (-) |
| G723955 | NA | other | upstream | 1374093 | 55377281 ~ 55377776 (-) |
| G723966 | NA | other | upstream | 1393436 | 55396624 ~ 55396885 (-) |
