Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965682 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 54002434 ~ 54002567 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XR_005053060.1 | True | 134 | mRNA | 0.45 | 1 | 54002434 | 54002567 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530121 | LOC106568956 | coding | downstream | 7130 | 53965997 ~ 53995304 (-) |
| insl3 | NA | coding | downstream | 84817 | 53914820 ~ 53917617 (-) |
| LOC110530934 | LOC106568959 | coding | downstream | 121649 | 53818706 ~ 53880785 (-) |
| ocel1 | LOC106568960 | coding | downstream | 190242 | 53806663 ~ 53812192 (-) |
| plvapa | LOC106568963 | coding | downstream | 273763 | 53722172 ~ 53728671 (-) |
| cnn2 | cnn2 | coding | upstream | 5867 | 54008434 ~ 54014434 (-) |
| crsp7 | LOC106568954 | coding | upstream | 22169 | 54024736 ~ 54039572 (-) |
| LOC110530125 | LOC106568953 | coding | upstream | 55555 | 54058122 ~ 54105410 (-) |
| LOC110530126 | LOC106569003 | coding | upstream | 124501 | 54127068 ~ 54131739 (-) |
| LOC110530134 | LOC106568945 | coding | upstream | 371666 | 54374233 ~ 54377574 (-) |
| G722699 | NA | non-coding | downstream | 37027 | 53965176 ~ 53965407 (-) |
| G722696 | NA | non-coding | downstream | 48005 | 53954197 ~ 53954429 (-) |
| G722694 | NA | non-coding | downstream | 50034 | 53952195 ~ 53952400 (-) |
| G722686 | NA | non-coding | downstream | 57488 | 53944594 ~ 53944946 (-) |
| G722659 | NA | non-coding | downstream | 96972 | 53905148 ~ 53905462 (-) |
| G722728 | NA | non-coding | upstream | 30724 | 54033291 ~ 54034722 (-) |
| G722805 | LOC106568951 | non-coding | upstream | 177875 | 54180442 ~ 54185532 (-) |
| G722812 | NA | non-coding | upstream | 185502 | 54188069 ~ 54189214 (-) |
| G722814 | NA | non-coding | upstream | 186825 | 54189392 ~ 54243058 (-) |
| G722773 | LOC106568951 | non-coding | upstream | 202121 | 54204688 ~ 54207815 (-) |
| G722670 | NA | other | downstream | 74475 | 53926228 ~ 53927959 (-) |
| G722602 | NA | other | downstream | 146369 | 53803443 ~ 53856065 (-) |
| G722459 | NA | other | downstream | 502704 | 53495804 ~ 53499730 (-) |
| LOC110529122 | LOC106568971 | other | downstream | 538670 | 53462034 ~ 53478913 (-) |
| G721275 | NA | other | downstream | 1240983 | 52761039 ~ 52761451 (-) |
| G722761 | NA | other | upstream | 121812 | 54124379 ~ 54139341 (-) |
| G722854 | NA | other | upstream | 248547 | 54251114 ~ 54251546 (-) |
| G722864 | LOC106581475 | other | upstream | 279118 | 54281685 ~ 54281978 (-) |
| G723955 | NA | other | upstream | 1374714 | 55377281 ~ 55377776 (-) |
| G723966 | NA | other | upstream | 1394057 | 55396624 ~ 55396885 (-) |
