Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110530163 |
| gene name | LOC106568918 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 55335612 ~ 55337598 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| uncharacterized protein LOC110530163 isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021613016.2 | False | 798 | mRNA | 0.42 | 4 | 55335612 | 55337587 |
| XM_021613014.2 | True | 968 | mRNA | 0.45 | 5 | 55335612 | 55337598 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530161 | LOC106568919 | coding | downstream | 22008 | 55304680 ~ 55313604 (-) |
| LOC110530159 | LOC106569020 | coding | downstream | 112284 | 55217971 ~ 55223328 (-) |
| LOC118965529 | NA | coding | downstream | 120879 | 55211750 ~ 55214733 (-) |
| LOC110530157 | LOC106568924 | coding | downstream | 124509 | 55203683 ~ 55211103 (-) |
| LOC110530155 | LOC106568925 | coding | downstream | 154832 | 55154678 ~ 55180780 (-) |
| si:ch211-106h4.4 | LOC106568915 | coding | upstream | 86068 | 55423666 ~ 55456052 (-) |
| LOC110530166 | arpc5 | coding | upstream | 123598 | 55461196 ~ 55468070 (-) |
| odr4 | odr4 | coding | upstream | 196018 | 55533616 ~ 55544134 (-) |
| LOC118965626 | NA | coding | upstream | 218280 | 55555878 ~ 55564099 (-) |
| LOC110530170 | LOC106568909 | coding | upstream | 230245 | 55567843 ~ 55614934 (-) |
| G723891 | NA | non-coding | downstream | 61709 | 55257662 ~ 55273903 (-) |
| G723844 | NA | non-coding | downstream | 148732 | 55186561 ~ 55186880 (-) |
| G723843 | LOC106569022 | non-coding | downstream | 149485 | 55185627 ~ 55186127 (-) |
| G723814 | NA | non-coding | downstream | 194778 | 55139311 ~ 55140834 (-) |
| G723956 | NA | non-coding | upstream | 40492 | 55378090 ~ 55378339 (-) |
| G723967 | NA | non-coding | upstream | 61451 | 55399049 ~ 55399513 (-) |
| G723969 | NA | non-coding | upstream | 65014 | 55402612 ~ 55403050 (-) |
| G723970 | NA | non-coding | upstream | 66946 | 55404544 ~ 55404942 (-) |
| G723971 | LOC106568916 | non-coding | upstream | 67709 | 55405307 ~ 55405879 (-) |
| G722864 | LOC106581475 | other | downstream | 1053634 | 54281685 ~ 54281978 (-) |
| G722854 | NA | other | downstream | 1084066 | 54251114 ~ 54251546 (-) |
| G722761 | NA | other | downstream | 1196271 | 54124379 ~ 54139341 (-) |
| G722670 | NA | other | downstream | 1407653 | 53926228 ~ 53927959 (-) |
| G722602 | NA | other | downstream | 1479547 | 53803443 ~ 53856065 (-) |
| G723955 | NA | other | upstream | 39683 | 55377281 ~ 55377776 (-) |
| G723966 | NA | other | upstream | 59026 | 55396624 ~ 55396885 (-) |
| G724287 | LOC106568908 | other | upstream | 297940 | 55635538 ~ 55646014 (-) |
| G724400 | NA | other | upstream | 447919 | 55785517 ~ 55791485 (-) |
| G724943 | LOC106604981 | other | upstream | 782605 | 56120203 ~ 56128288 (-) |
