Item | Value |
---|---|
gene id | si:ch211-267e7.3 |
gene name | LOC106568906 |
gene type | misc |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 55710156 ~ 55724271 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
description |
---|
PREDICTED: ADAMTS-like protein 2 |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036985737.1 | False | 2815 | mRNA | 0.57 | 15 | 55710156 | 55721805 |
XM_036985735.1 | False | 4477 | mRNA | 0.55 | 18 | 55710162 | 55724271 |
XM_036985736.1 | False | 4474 | mRNA | 0.55 | 18 | 55710162 | 55724271 |
TU822550 | False | 1218 | TUCP | 0.54 | 9 | 55710240 | 55718237 |
TU822546 | True | 768 | lncRNA | 0.51 | 1 | 55723489 | 55724256 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530172 | LOC106568908 | coding | upstream | 27234 | 55631924 ~ 55682922 (+) |
LOC110530941 | LOC106568999 | coding | upstream | 79942 | 55625971 ~ 55630214 (+) |
LOC110530940 | NA | coding | upstream | 155362 | 55549889 ~ 55556293 (+) |
LOC118965530 | NA | coding | upstream | 159870 | 55548019 ~ 55550286 (+) |
LOC110530169 | LOC106568913 | coding | upstream | 176626 | 55529125 ~ 55533530 (+) |
frrs1a | LOC106568904 | coding | downstream | 62210 | 55786481 ~ 55800644 (+) |
LOC110530181 | LOC106568899 | coding | downstream | 191634 | 55915905 ~ 55978796 (+) |
LOC110530182 | NA | coding | downstream | 345708 | 56069979 ~ 56075431 (+) |
LOC110530943 | LOC106568897 | coding | downstream | 389683 | 56113954 ~ 56250195 (+) |
LOC118965531 | NA | coding | downstream | 569321 | 56293592 ~ 56305010 (+) |
G724154 | NA | non-coding | upstream | 41598 | 55668217 ~ 55668558 (+) |
G724152 | NA | non-coding | upstream | 43793 | 55662590 ~ 55666363 (+) |
G724140 | NA | non-coding | upstream | 84302 | 55625631 ~ 55625854 (+) |
G724133 | NA | non-coding | upstream | 92877 | 55617066 ~ 55617279 (+) |
G724096 | LOC106568909 | non-coding | upstream | 95267 | 55587567 ~ 55614889 (+) |
G724191 | NA | non-coding | downstream | 14171 | 55738442 ~ 55739151 (+) |
G724192 | LOC106568905 | non-coding | downstream | 15468 | 55739739 ~ 55740547 (+) |
G724237 | LOC106568902 | non-coding | downstream | 91115 | 55815386 ~ 55819692 (+) |
G724428 | NA | non-coding | downstream | 122130 | 55846401 ~ 55846617 (+) |
G724441 | NA | non-coding | downstream | 130167 | 55854438 ~ 55854956 (+) |
LOC110530939 | LOC106568914 | other | upstream | 250036 | 55457870 ~ 55461071 (+) |
LOC110530153 | LOC106568927 | other | upstream | 573525 | 55120291 ~ 55136638 (+) |
LOC118965528 | LOC106568937 | other | upstream | 1040042 | 54557953 ~ 54670115 (+) |
rps28 | NA | other | upstream | 1782197 | 53926018 ~ 53927959 (+) |
mrpl34 | mrpl34 | other | upstream | 2038297 | 53670348 ~ 53674103 (+) |
G725573 | NA | other | downstream | 1259299 | 56983570 ~ 56984285 (+) |
LOC110530213 | LOC106568871 | other | downstream | 1744601 | 57421244 ~ 57478855 (+) |
G725878 | NA | other | downstream | 1789335 | 57513606 ~ 57515394 (+) |
G725907 | LOC106581475 | other | downstream | 1830452 | 57554723 ~ 57555482 (+) |
LOC118965533 | NA | other | downstream | 2128741 | 57850799 ~ 57854417 (+) |
si:ch211-267e7.3 | LOC106568906 | other | upstream | 5252 | 55710156 ~ 55724271 (+) |