XLOC_025841 (CU571382.1)


Basic Information

Item Value
gene id XLOC_025841
gene name CU571382.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58667974 ~ 58669493 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050713
ATACTGTCAGCAGAATAACACTGACAAGTGTTGATTAAACTCTAGAGACTGGGCTGTGAACTCTGACATAAAGCATACAACACATTAGATGAAGCAGTTGGTGTTTGCTGATGGAGTGATTGTGTGAAGTGTGGAGCTCCTCCCTCTGTCAGAGTTTCTCTTCTCTATATGAGCGTCTCCTTCTCTCTGATCGTCTTCATGTCTCTAAACTCAAACTGCTCCTCACAGGCCAGATCATGCTGATCATCTTCTACTGCTCTCTCCTCACTCTTCTGTCATgTGTCAGATGTGCGAAAGTGCTCACTCAGAAACCCTCCATAATGACTGAAGACAAGGGCAGATCTGCGACTCTGGACTGTAATATTGAAAGAGATGATGGTTTTTATTATGTGAACTGGTATAAACAGACTCCAAACGCAGCTCTTCAGTTTGTGTTGGGATATTATCATTCTCGCAGCTCACCTGATCTCTATGGAGATGATTTTACCTCCAGCCGCTTCACATCTAAAGCTCAGTCAAGTATTGACTATAGTCTGATCATCAGTAATGTGGATGTGAGTGATTCTGCATTGTATTACTGTGGGACATGGGACAAATCTGCTAGTGAGGGCGTATCACAATGATTCACATCATGACAAAAACCTCCTCACTGCATTCACTTCTGCTTTTAGACAACAGAGGATACTGTAAGAGCTCGACTTCACATTAACAGTGAATGAAACAGATAATTTcatgtctttattattttttattattatttattattattaatgtctaTTACTTTGCCTTTATTTGTGTGCTGTTTGGATCTGAACAGTTTCTGACTCAGTCTATATAGCAGTATCTGCACATTAAAGCGACTCGCTCTTTATTGCAAAGACAGACAATCAAAGTGAATACAAACACTTAATAATGATTACAGGACAAACATTGCTCACTCTCTGTGTGTCCTACACAATACAGGTGTAACATCCTTTAAGGCTCTTATATCTGATCATGACTAGTGCAGTATATCAGTGACTCTCTAATGCTGTGTTGAACTGGATCTCACTGgtgagtcttaaaatgtcttaaatttcaaaaactcaattttaggccttaaaaagtcttaaattgactgaaatattgtgttgtaggacTAAAACcaatttaaacaggtcttaattttgtaATGTAAAGCTATTTAATTGGGCCGACACACATCCAATCACTAATAATCCATCACAATaagagtttatttattaactgtttttACTAATATGGtgtaattatcttccttacaataacatttgttttaaatgttttaactgGGTCATTAGAAAAAAAgtccttagtgtttagccttgtctaagtctaaaatttcattcataatgattttaaaaaggtcttaaaagtcttaaatgtgatgtgatgaaacctgtagaaactctG

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000069839

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050713 True 1431 lncRNA 0.37 2 58667974 58669493

Neighbor

gene id symbol gene type direction distance location
XLOC_025840 CU571382.4 coding upstream 2650 58663942 ~ 58665324 (+)
XLOC_025838 FP016018.4 coding upstream 8631 58655375 ~ 58659343 (+)
XLOC_025839 FP016018.1 coding upstream 10980 58656312 ~ 58656994 (+)
XLOC_025836 NA coding upstream 43593 58588204 ~ 58624381 (+)
XLOC_025835 NA coding upstream 52035 58580589 ~ 58615939 (+)
XLOC_025842 CU571382.1 coding downstream 81 58669574 ~ 58673206 (+)
XLOC_025843 NA coding downstream 13064 58682557 ~ 58682886 (+)
XLOC_025844 CU571382.5 coding downstream 24683 58694176 ~ 58695037 (+)
XLOC_025845 CU570691.1 coding downstream 32827 58702320 ~ 58710755 (+)
XLOC_025846 NA coding downstream 41561 58711054 ~ 58712370 (+)
XLOC_025429 BX649540.1 misc upstream 28418938 30248739 ~ 30249036 (+)
XLOC_025834 NA non-coding upstream 72324 58554430 ~ 58595650 (+)
XLOC_025832 AL772300.1 non-coding upstream 197455 58469935 ~ 58470519 (+)
XLOC_025830 NA non-coding upstream 238850 58425000 ~ 58429124 (+)

Expression


Co-expression Network