XLOC_025842 (CU571382.1)


Basic Information

Item Value
gene id XLOC_025842
gene name CU571382.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58669574 ~ 58673206 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050714
atgttaattttaataacagTGTgTGTCAGATGGTGTCAGGTGCTCACTCAGAAACCCTCCATAATGACTGAAGACAAGGGCAGATCTGTGACTCTGGACTGTAATATTGAGAAAGATGAGAATTATGTCAGCTGGCATAAACAGACTCCAAACGCAGCTCCTCAGTTTGTGTTGAGATATTATCATTCTCTCAGCTCACCTGATAGATATGGGGATGGTTTTACCTCCAGCCGCTTCACATCTAAAGCTCAGTCTAAAATTGACTATAGTCTGATCATCAGTAATGTGGATGTGAGTGATTCTGCAGTGTATTACTGTCAGACATGGGACAGCTCTGTTAGTGAGGGCGTATCACAGTGA

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000069839

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050714 True 360 lncRNA 0.42 2 58669574 58673206

Neighbor

gene id symbol gene type direction distance location
XLOC_025841 CU571382.1 coding upstream 81 58667974 ~ 58669493 (+)
XLOC_025840 CU571382.4 coding upstream 4250 58663942 ~ 58665324 (+)
XLOC_025838 FP016018.4 coding upstream 10231 58655375 ~ 58659343 (+)
XLOC_025839 FP016018.1 coding upstream 12580 58656312 ~ 58656994 (+)
XLOC_025836 NA coding upstream 45193 58588204 ~ 58624381 (+)
XLOC_025843 NA coding downstream 9351 58682557 ~ 58682886 (+)
XLOC_025844 CU571382.5 coding downstream 20970 58694176 ~ 58695037 (+)
XLOC_025845 CU570691.1 coding downstream 29114 58702320 ~ 58710755 (+)
XLOC_025846 NA coding downstream 37848 58711054 ~ 58712370 (+)
XLOC_025847 NA coding downstream 39494 58712700 ~ 58715206 (+)
XLOC_025429 BX649540.1 misc upstream 28420538 30248739 ~ 30249036 (+)
XLOC_025835 NA non-coding upstream 53635 58580589 ~ 58615939 (+)
XLOC_025834 NA non-coding upstream 73924 58554430 ~ 58595650 (+)
XLOC_025832 AL772300.1 non-coding upstream 199055 58469935 ~ 58470519 (+)

Expression


Co-expression Network