XLOC_025843


Basic Information

Item Value
gene id XLOC_025843
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58682557 ~ 58682886 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052828
AATCATTCAGCGCTGCTTCCTGATGATGCGCTGCTGATGCCTGATGATGTCACCGAGCGTCTCTTCAGTCTCTTATAGCTGCTCTCTGATCAGTCTCCTCTTCAGTCTgttcacatcacacacacactcacaacatGCTGACGCTCTTCATCCTCCTCATCATCACTCTATCATGTGTCAGTGGAGTGACTGTAGTGACTCAGAGTCCAGTAATCACAGTCAGTAAAGGACAA

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052828 True 233 lncRNA 0.48 2 58682557 58682886

Neighbor

gene id symbol gene type direction distance location
XLOC_025837 NA coding upstream 2488 58654524 ~ 58680069 (+)
XLOC_025842 CU571382.1 coding upstream 9351 58669574 ~ 58673206 (+)
XLOC_025841 CU571382.1 coding upstream 13064 58667974 ~ 58669493 (+)
XLOC_025840 CU571382.4 coding upstream 17233 58663942 ~ 58665324 (+)
XLOC_025838 FP016018.4 coding upstream 23214 58655375 ~ 58659343 (+)
XLOC_025844 CU571382.5 coding downstream 11290 58694176 ~ 58695037 (+)
XLOC_025845 CU570691.1 coding downstream 19434 58702320 ~ 58710755 (+)
XLOC_025846 NA coding downstream 28168 58711054 ~ 58712370 (+)
XLOC_025847 NA coding downstream 29814 58712700 ~ 58715206 (+)
XLOC_025848 NA coding downstream 123329 58806215 ~ 58811833 (+)
XLOC_025429 BX649540.1 misc upstream 28433521 30248739 ~ 30249036 (+)
XLOC_025836 NA non-coding upstream 58176 58588204 ~ 58624381 (+)
XLOC_025835 NA non-coding upstream 66618 58580589 ~ 58615939 (+)

Expression


Co-expression Network