XLOC_025844 (CU571382.5)



Basic Information


Item Value
gene id XLOC_025844
gene name CU571382.5
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58694176 ~ 58695037 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00050716
GAAAAAGGCTCCTGTTGACCCTCAGAGAGCAGCATCTCCAGTGTTCAGCTGTGTGTCCATGAAGAGCAACAGATCCATGCATCAGCCTCCCCAATTCAGTGATGGATCTGCTGTGAGATCTGCGTCTGTTGATCTATGGATGAAGCAAACAGAACAGCAGCTCTTGCCTCATGAAAGTGAACTGCAGATGAATGAGACGAGACCTCAGCTCTGGCCTAATGGATGTGAACAACAGTTGAAGGACACAAGACCTCAGCCCTGGCCTACTGGAAATGAACAACAGTTGAAGGACACAAGACCTCAGCTCTGGCCTAATGGATGTGAACAACAGTTGAAGGACACAATACCTCAGCTCTGGCCTAATGGAAGTGAACAACAGTTGAAGGACACGAGACCTCAGCTCTGGCCTAATGGAAGTGAACTACAGTTGAAGGACACGAGACCTCAGCTCTGGCCTAATGGATGTGAACAACAGTTGAAGGACACGAGACCTCAGCTCTGGCCTAATGGATGTGAACAACAGTTGAAGGACACGAGACCTCAGC

Function


GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000113546

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00050716 True 545 lncRNA 0.49 2 58694176 58695037

Neighbor


gene id symbol gene type direction distance location
XLOC_025843 NA coding upstream 11290 58682557 ~ 58682886 (+)
XLOC_025837 NA coding upstream 14107 58654524 ~ 58680069 (+)
XLOC_025842 CU571382.1 coding upstream 20970 58669574 ~ 58673206 (+)
XLOC_025841 CU571382.1 coding upstream 24683 58667974 ~ 58669493 (+)
XLOC_025840 CU571382.4 coding upstream 28852 58663942 ~ 58665324 (+)
XLOC_025845 CU570691.1 coding downstream 7283 58702320 ~ 58710755 (+)
XLOC_025846 NA coding downstream 16017 58711054 ~ 58712370 (+)
XLOC_025847 NA coding downstream 17663 58712700 ~ 58715206 (+)
XLOC_025848 NA coding downstream 111178 58806215 ~ 58811833 (+)
XLOC_025849 igl1c3 coding downstream 138269 58833306 ~ 58835177 (+)
XLOC_025429 BX649540.1 misc upstream 28445140 30248739 ~ 30249036 (+)
XLOC_025836 NA non-coding upstream 69795 58588204 ~ 58624381 (+)
XLOC_025850 NA non-coding downstream 140424 58835461 ~ 58857483 (+)

Expression



Co-expression Network