asph (LOC106568874)


Basic Information

Item Value
gene id asph
gene name LOC106568874
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57108203 ~ 57130512 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613089.2
GCTGAGGGCGCATTCACTAAACAGTGGACGGGGTTGCTATGGGCTTCGGGTTATGAGGGCAGAGATTTGATTTCTATTGGGCCACCTTTAGTGCAAGAAATTGAGAGTGAAGCTCGTTAATTTTGAATTTGCACATTTCTACTTGAATTCAAGCAACTTCGAATAGCCATGGCCCCGAAGAAAAACGCACGAGGACACAAAATGAAAGAAGCCAAAGCCCAGCTGTCCAGTAAAAATGGCAAGAAGCCTGAGGTAGCAGGAGGAAGCTCCTTCTTCACCTGGTTCATGGTTCTTGCCCTCCTGGGCGTCTGGACCTCTGTGGCCGCCGTCTACTTCGACCTGGTCGACTACCAAGGCGTCATCGGTCAACTTTCGTCCTATGATGCTGATGGAGATGGTGACTTCGATGTGGAGGATGCTAAAGTACTGCTAGATGAACCTCGACCCGATCGGAAAAGAGCGAGACACAGAGCCAGCTTAATCGAACCAGAATCTCCAAAAACAAAGGTCAAGAAAAAAGAGGCGGCTACTGAGACCAAAGATGAAAATCCAGGACATGTTTCCAAGAGAAAAGCCAAAAAAGAAAACCCTCTTACCAAAGACGTGGGCTGGAAGCTGAGGGAGGCCCTGAACCAGCAGCTGGCCATCATCCATGAGCGATTGGAGGCCAAAAAGATTGCCAAGATGGCGCTGGCCGAGGTGAGGAACATCCTGgccagggagaaggagaaggtcCTAGGGGTGACGAGGGACGAGGTGGCAAAGAAGGCTAAGGTGGCAACGGCAGCTAGGATGGAGGACAAGCCAGAGAAGGGGGAGTTTAAGAAGGCCTTGGGCAAGAttaggagagacaaagagaaggagggagaaaataagaaagagggagaaaataaGAAACAGGAGCAGGGCAAGAAAGCTAAGAAGAATGCGACAAAGCCAGACAAGAAGTCAGTGAAAGAGGTGAAGGGTAAGAGGGTGGAGGTCCCCAAAGACGCCAAAAATAAAGAGTCCCCCAAAGCTGCTGCTAAAAAGCTCAAGATGTCTGATAAGGGGGTCCGGAAATGATGCTAAACTCTTCACACCTGCACTGATGTCGGTGATCTTTCACTCCCTCTGCTGACACAGATGTTAAAAGATTCAGGAGAAACACCACCTGTGAGAGGTCTCCAGTGACAGACCCCTGCGAATGGGAGTAGGAAACCCCATACTGTGCAGGACAGCCATTTCCGCAATGTATAGTGCATAGTGTTTTAGCCACTTCCTGCTTGTGGTAAAAATCATAATGCTGTCCTCTATAGAAGTATGAACTGGACAAGGAAAGGCGCCAAGAGGATGGCAAGGTGCTGTAAGCTTAGTTTCCGATGTGGTTTAGTTTTGTGTTAATTTACATCAGAAAATATAGCTTTATTTAAAGTCGCTAGACAAGATATTTGTAGAATTAGACAATGATTTATTTTGCATTTGGTGGAGAAGTGGATTTGAAAGGATCAGCTATGTGCTTGTTCTTTGTTAATAAAGTTGCTGGATTCTG
>XM_036985765.1
GCTGAGGGCGCATTCACTAAACAGTGGACGGGGTTGCTATGGGCTTCGGGTTATGAGGGCAGAGATTTGATTTCTATTGGGCCACCTTTAGTGCAAGAAATTGAGAGTGAAGCTCGTTAATTTTGAATTTGCACATTTCTACTTGAATTCAAGCAACTTCGAATAGCCATGGCCCCGAAGAAAAACGCACGAGGACACAAAATGAAAGCCTCTTCTCTCAGCCTGATGGTTTAATTGGACGAAGGCCACAGAACTGAAGCCAAAGCCCAGCTGTCCAGTAAAAATGGCAAGAAGCCTGAGGTAGCAGGAGGAAGCTCCTTCTTCACCTGGTTCATGGTTCTTGCCCTCCTGGGCGTCTGGACCTCTGTGGCCGCCGTCTACTTCGACCTGGTCGACTACCAAGGCGTCATCGGTCAACTTTCGTCCTATGATGCTGATGGAGATGGTGACTTCGATGTGGAGGATGCTAAAGTACTGCTAGATGAACCTCGACCCGATCGGAAAAGAGCGAGACACAGAGCCAGCTTAATCGAACCAGAATCTCCAAAAACAAAGGTCAAGAAAAAAGAGGCGGCTACTGAGACCAAAGATGAAAATCCAGGACATGTTTCCAAGAGAAAAGCCAAAAAAGAAAACCCTCTTACCAAAGACGTGGGCTGGAAGCTGAGGGAGGCCCTGAACCAGCAGCTGGCCATCATCCATGAGCGATTGGAGGCCAAAAAGATTGCCAAGATGGCGCTGGCCGAGGTGAGGAACATCCTGgccagggagaaggagaaggtcCTAGGGGTGACGAGGGACGAGGTGGCAAAGAAGGCTAAGGTGGCAACGGCAGCTAGGATGGAGGACAAGCCAGAGAAGGGGGAGTTTAAGAAGGCCTTGGGCAAGAttaggagagacaaagagaaggagggagaaaataagaaagagggagaaaataaGAAACAGGAGCAGGGCAAGAAAGCTAAGAAGAATGCGACAAAGCCAGACAAGAAGTCAGTGAAAGAGGTGAAGGGTAAGAGGGTGGAGGTCCCCAAAGACGCCAAAAATAAAGAGTCCCCCAAAGCTGCTGCTAAAAAGCTCAAGATGTCTGATAAGGGGGTCCGGAAATGATGCTAAACTCTTCACACCTGCACTGATGTCGGTGATCTTTCACTCCCTCTGCTGACACAGATGTTAAAAGATTCAGGAGAAACACCACCTGTGAGAGGTCTCCAGTGACAGACCCCTGCGAATGGGAGTAGGAAACCCCATACTGTGCAGGACAGCCATTTCCGCAATGTATAGTGCATAGTGTTTTAGCCACTTCCTGCTTGTGGTAAAAATCATAATGCTGTCCTCTATAGAAGTATGAACTGGACAAGGAAAGGCGCCAAGAGGATGGCAAGGTGCTGTAAGCTTAGTTTCCGATGTGGTTTAGTTTTGTGTTAATTTACATCAGAAAATATAGCTTTATTTAAAGTCGCTAGACAAGATATTTGTAGAATTAGACAATGATTTATTTTGCATTTGGTGGAGAAGTGGATTTGAAAGGATCAGCTATGTGCTTGTTCTTTGTTAATAAAGTTGCTGGATTCTG
>XM_021613087.2
TTCCTGCTGAGTTTGCCTGGAACAAATAGAGGAGGGTAGCTGTTGCAAAGGGGTTTGGGGGAAGGATAAGGGAGATAAGACTCACTGAAGCTTTTCCCATTCGGACGGGTCAGGGACGGTCTGCACGGATGGAAGTGCCGATAGTCAAGCCCACCCCGGTGTTGGAACCCGCGGTGGTTGTCGAACACACAGAAGAAGCCAAAGCCCAGCTGTCCAGTAAAAATGGCAAGAAGCCTGAGGTAGCAGGAGGAAGCTCCTTCTTCACCTGGTTCATGGTTCTTGCCCTCCTGGGCGTCTGGACCTCTGTGGCCGCCGTCTACTTCGACCTGGTCGACTACCAAGGCGTCATCGGTCAACTTTCGTCCTATGATGCTGATGGAGATGGTGACTTCGATGTGGAGGATGCTAAAGTACTGCTAGATGAACCTCGACCCGATCGGAAAAGAGCGAGACACAGAGCCAGCTTAATCGAACCAGAATCTCCAAAAACAAAGGTCAAGAAAAAAGAGGCGGCTACTGAGACCAAAGATGAAAATCCAGGACATGTTTCCAAGAGAAAAGCCAAAAAAGAAAACCCTCTTACCAAAGACGTGGGCTGGAAGCTGAGGGAGGCCCTGAACCAGCAGCTGGCCATCATCCATGAGCGATTGGAGGCCAAAAAGATTGCCAAGATGGCGCTGGCCGAGGTGAGGAACATCCTGgccagggagaaggagaaggtcCTAGGGGTGACGAGGGACGAGGTGGCAAAGAAGGCTAAGGTGGCAACGGCAGCTAGGATGGAGGACAAGCCAGAGAAGGGGGAGTTTAAGAAGGCCTTGGGCAAGAttaggagagacaaagagaaggagggagaaaataagaaagagggagaaaataaGAAACAGGAGCAGGGCAAGAAAGCTAAGAAGAATGCGACAAAGCCAGACAAGAAGTCAGTGAAAGAGGTGAAGGGTAAGAGGGTGGAGGTCCCCAAAGACGCCAAAAATAAAGAGTCCCCCAAAGCTGCTGCTAAAAAGCTCAAGATGTCTGATAAGGGGGTCCGGAAATGATGCTAAACTCTTCACACCTGCACTGATGTCGGTGATCTTTCACTCCCTCTGCTGACACAGATGTTAAAAGATTCAGGAGAAACACCACCTGTGAGAGGTCTCCAGTGACAGACCCCTGCGAATGGGAGTAGGAAACCCCATACTGTGCAGGACAGCCATTTCCGCAATGTATAGTGCATAGTGTTTTAGCCACTTCCTGCTTGTGGTAAAAATCATAATGCTGTCCTCTATAGAAGTATGAACTGGACAAGGAAAGGCGCCAAGAGGATGGCAAGGTGCTGTAAGCTTAGTTTCCGATGTGGTTTAGTTTTGTGTTAATTTACATCAGAAAATATAGCTTTATTTAAAGTCGCTAGACAAGATATTTGTAGAATTAGACAATGATTTATTTTGCATTTGGTGGAGAAGTGGATTTGAAAGGATCAGCTATGTGCTTGTTCTTTGTTAATAAAGTTGCTGGATTCTG
>XM_021613091.2
GTTTGCCTGGAACAAATAGAGGAGGGTAGCTGTTGCAAAGGGGTTTGGGGGAAGGATAAGGGAGATAAGACTCACTGAAGCTTTTCCCATTCGGACGGGTCAGGGACGGTCTGCACGGATGGAAGTGCCGATAGTCAAGCCCACCCCGGTGTTGGAACCCGCGGTGGTTGTCGAACACACAGAAGAAGCCAAAGCCCAGCTGTCCAGTAAAAATGGCAAGAAGCCTGAGGTAGCAGGAGGAAGCTCCTTCTTCACCTGGTTCATGGTTCTTGCCCTCCTGGGCGTCTGGACCTCTGTGGCCGCCGTCTACTTCGACCTGGTCGACTACCAAGGCGTCATCGGTCAACTTTCGTCCTATGATGCTGATGGAGATGGTGACTTCGATGTGGAGGATGCTAAAGTACTGCTAGATGAAAATCCAGGACATGTTTCCAAGAGAAAAGCCAAAAAAGAAAACCCTCTTACCAAAGACGTGGGCTGGAAGCTGAGGGAGGCCCTGAACCAGCAGCTGGCCATCATCCATGAGCGATTGGAGGCCAAAAAGATTGCCAAGATGGCGCTGGCCGAGGTGAGGAACATCCTGgccagggagaaggagaaggtcCTAGGGGTGACGAGGGACGAGGTGGCAAAGAAGGCTAAGGTGGCAACGGCAGCTAGGATGGAGGACAAGCCAGAGAAGGGGGAGTTTAAGAAGGCCTTGGGCAAGAttaggagagacaaagagaaggagggagaaaataagaaagagggagaaaataaGAAACAGGAGCAGGGCAAGAAAGCTAAGAAGAATGCGACAAAGCCAGACAAGAAGTCAGTGAAAGAGGTGAAGGGTAAGAGGGTGGAGGTCCCCAAAGACGCCAAAAATAAAGAGTCCCCCAAAGCTGCTGCTAAAAAGCTCAAGATGTCTGATAAGGGGGTCCGGAAATGATGCTAAACTCTTCACACCTGCACTGATGTCGGTGATCTTTCACTCCCTCTGCTGACACAGATGTTAAAAGATTCAGGAGAAACACCACCTGTGAGAGGTCTCCAGTGACAGACCCCTGCGAATGGGAGTAGGAAACCCCATACTGTGCAGGACAGCCATTTCCGCAATGTATAGTGCATAGTGTTTTAGCCACTTCCTGCTTGTGGTAAAAATCATAATGCTGTCCTCTATAGAAGTATGAACTGGACAAGGAAAGGCGCCAAGAGGATGGCAAGGTGCTGTAAGCTTAGTTTCCGATGTGGTTTAGTTTTGTGTTAATTTACATCAGAAAATATAGCTTTATTTAAAGTCGCTAGACAAGATATTTGTAGAATTAGACAATGATTTATTTTGCATTTGGTGGAGAAGTGGATTTGAAAGGATCAGCTATGTGCTTGTTCTTTGTTAATAAAGTTGCTGGATTCTG
>XM_036985764.1
CTGGAACAAATAGAGGAGGGTAGCTGTTGCAAAGGGGTTTGGGGGAAGGATAAGGGAGATAAGACTCACTGAAGCTTTTCCCATTCGGACGGGTCAGGGACGGTCTGCACGGATGGAAGTGCCGATAGTCAAGCCCACCCCGGTGTTGGAACCCGCGGTGGTTGTCGAACACACAGAAGAAGCCAAAGCCCAGCTGTCCAGTAAAAATGGCAAGAAGCCTGAGGTAGCAGGAGGAAGCTCCTTCTTCACCTGGTTCATGGTTCTTGCCCTCCTGGGCGTCTGGACCTCTGTGGCCGCCGTCTACTTCGACCTGGTCGACTACCAAGGCGTCATCGGTCAACTTTCGTCCTATGATGCTGATGGAGATGGTGACTTCGATGTGGAGGATGCTAAAGTACTGCTAGCCAGCTTAATCGAACCAGAATCTCCAAAAACAAAGGTCAAGAAAAAAGAGGCGGCTACTGAGACCAAAGATGAAAATCCAGGACATGTTTCCAAGAGAAAAGCCAAAAAAGAAAACCCTCTTACCAAAGACGTGGGCTGGAAGCTGAGGGAGGCCCTGAACCAGCAGCTGGCCATCATCCATGAGCGATTGGAGGCCAAAAAGATTGCCAAGATGGCGCTGGCCGAGGTGAGGAACATCCTGgccagggagaaggagaaggtcCTAGGGGTGACGAGGGACGAGGTGGCAAAGAAGGCTAAGGTGGCAACGGCAGCTAGGATGGAGGACAAGCCAGAGAAGGGGGAGTTTAAGAAGGCCTTGGGCAAGAttaggagagacaaagagaaggagggagaaaataagaaagagggagaaaataaGAAACAGGAGCAGGGCAAGAAAGCTAAGAAGAATGCGACAAAGCCAGACAAGAAGTCAGTGAAAGAGGTGAAGGGTAAGAGGGTGGAGGTCCCCAAAGACGCCAAAAATAAAGAGTCCCCCAAAGCTGCTGCTAAAAAGCTCAAGATGTCTGATAAGGGGGTCCGGAAATGATGCTAAACTCTTCACACCTGCACTGATGTCGGTGATCTTTCACTCCCTCTGCTGACACAGATGTTAAAAGATTCAGGAGAAACACCACCTGTGAGAGGTCTCCAGTGACAGACCCCTGCGAATGGGAGTAGGAAACCCCATACTGTGCAGGACAGCCATTTCCGCAATGTATAGTGCATAGTGTTTTAGCCACTTCCTGCTTGTGGTAAAAATCATAATGCTGTCCTCTATAGAAGTATGAACTGGACAAGGAAAGGCGCCAAGAGGATGGCAAGGTGCTGTAAGCTTAGTTTCCGATGTGGTTTAGTTTTGTGTTAATTTACATCAGAAAATATAGCTTTATTTAAAGTCGCTAGACAAGATATTTGTAGAATTAGACAATGATTTATTTTGCATTTGGTGGAGAAGTGGATTTGAAAGGATCAGCTATGTGCTTGTTCTTTGTTAATAAAGTTGCTGGATTCTG

Function

NR:

description
triadin-like isoform X3

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613089.2 False 1531 mRNA 0.47 7 57108203 57130512
XM_036985765.1 False 1579 mRNA 0.47 8 57108203 57130512
XM_021613087.2 False 1518 mRNA 0.48 7 57118954 57130512
XM_021613091.2 False 1400 mRNA 0.49 5 57118964 57130512
XM_036985764.1 True 1463 mRNA 0.48 6 57118970 57130512

Neighbor

gene id symbol gene type direction distance location
LOC110530207 ttpa coding upstream 21588 57081546 ~ 57086615 (+)
LOC110530206 LOC106599164 coding upstream 28758 57045780 ~ 57079445 (+)
LOC110530204 LOC106569008 coding upstream 105642 56998428 ~ 57002561 (+)
lhx8a lhx8 coding upstream 440269 56663849 ~ 56667934 (+)
tyw3 tyw3 coding upstream 504038 56601898 ~ 56604165 (+)
car8 car8 coding downstream 209073 57339585 ~ 57361813 (+)
LOC110530213 LOC106568871 coding downstream 290732 57421244 ~ 57478855 (+)
LOC110530217 LOC106568867 coding downstream 427516 57558028 ~ 57572376 (+)
LOC110530216 LOC106568865 coding downstream 442139 57572651 ~ 57582193 (+)
eif4g1a NA coding downstream 467323 57597835 ~ 57625254 (+)
G725585 LOC106568875 non-coding upstream 82814 57008143 ~ 57025389 (+)
G725581 NA non-coding upstream 105283 57002684 ~ 57002920 (+)
G725577 NA non-coding upstream 117508 56990471 ~ 56990695 (+)
G725554 NA non-coding upstream 153022 56954975 ~ 56955181 (+)
G725411 NA non-coding upstream 323656 56783447 ~ 56784547 (+)
G725615 NA non-coding downstream 6320 57136832 ~ 57142701 (+)
G725809 NA non-coding downstream 277562 57408074 ~ 57408412 (+)
G725818 NA non-coding downstream 287845 57418357 ~ 57418677 (+)
G725869 LOC106568870 non-coding downstream 370021 57500533 ~ 57503590 (+)
G725872 LOC106568870 non-coding downstream 376149 57506661 ~ 57507160 (+)
G725573 NA other upstream 123918 56983570 ~ 56984285 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1389966 55710156 ~ 55724271 (+)
LOC110530939 LOC106568914 other upstream 1648083 55457870 ~ 55461071 (+)
LOC110530153 LOC106568927 other upstream 1971572 55120291 ~ 55136638 (+)
LOC118965528 LOC106568937 other upstream 2438089 54557953 ~ 54670115 (+)
G725878 NA other downstream 383094 57513606 ~ 57515394 (+)
G725907 LOC106581475 other downstream 424211 57554723 ~ 57555482 (+)
LOC118965533 NA other downstream 722500 57850799 ~ 57854417 (+)
G727161 NA other downstream 1226527 58357039 ~ 58358245 (+)

Expression

asph(LOC106568874) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 200.
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asph(LOC106568874) Expression in each Bioproject

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asph(LOC106568874) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 1500.
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Co-expression Network