XLOC_025845 (CU570691.1)


Basic Information

Item Value
gene id XLOC_025845
gene name CU570691.1
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58702320 ~ 58710755 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050717
tcaGCTGTAGCAGAAAGAGAGCAGCGTCTCCAGTGTCCAGCTGTGTGTCCATGAAGAGCAACGGATCTATGAATGATCCACCAGCATTCAGTAATAAAGCAGTGACCTTTGACCCTGTGTGAATCAGTCGTGTGTCCCTTCAGACTTACACATCCTCCAGTCAGAGTCACTTCAGTCTTCATGAAGATCTTCAGAGAGTGAAAGAGCAGCACAGATTCATCATGAAGATCAAGTACGAGAGCGTATTTGAGGGAGTGAAACTCCAGCAGAatcaaaccctcctgaacagcaTTTACACACAGCTGTACATCATAgagggagagagtgaaggagtgaatgaagaacatgaggtgcTGCAGATGGAGAAGAGATACAAGACTCTCCAAGACACTCCAATcaactgcaatgacatctttaacccttcagctgaagcaggagatgaGGAGAAGAGCAGAGAGGAGAAAGAgcagatcaagactgttctcactaaaggcatcgctggaattggaaaaaccgtctctgtgcagaagttcattctggactgggccgagagaaaagccaatcaggatgtagatttcatctttgtgcttccatttcgagagctgaacttgattaaagatcatcagtacagtcttcacacacttctgctggactttcatcctgaacttcaGCATCTGGACTCACAGATTTATGAGGAGTGTAAAGtcgtgttcatctttgatggtctggatgaaagcagaatcacactgatgttttcagACTGTCAGAAAGTTTCTGATGTGACTGAAGCTTCATCAGTGAGTGTGTTGATGTCAAACCTCatgaaaggagatctgcttccctccgctctcatctggatcaccagcagaccagcagcagccaatcagatcccCTCAAAACACATCAGCCTCGTGACGGAGATTCAGGGCTTCAATgaccctcagaaggaggaatatttcaggaagagaatcagagATGAagatcaagccagcagaatcatctcccacatcagaagagcaagaagcctccacatcatgtgccacatacccgtcttctgctggatctcagccACTGTGCTTCAAACCATCCTGAAAGAAGATccgagtgcagaaatccctcaaactctgactgagatgtacatccacttcctcctcattcagacacacatgaggaagcagaagtatgaagagagagatccagagaaactcctgcagtccaacagagacGTGATTGTGAAACTTGCTGAACTGGCTTTCAatcagctgatgaagggcaatgtgatgttctacgaggaggacctgattgagagcgggaTAGACGTCGCTGACgcctcagtgtattctgggatctgcactgagatcttcagAGAGGAATCTGTGATTTCTCAGAGGAAGGTTTAAAGCTTTGTTCATCTGAGCTTTCAGGAGTGTTTTGCAGCACTGTATGTGTTTTACTGCTATTTACACAACAACACTGAGGTGATGAAGATGTTCCTGACAGGGAAACACAGAACTCAGAGTGAGAAAATTCCTCTGGATGTGCTTCTGAAAGGAGCGATGAATAAAGCCCTGGAGAGTAAAACTGGACACCTGGATCTGTTCCTGCGATTTCTTCATGGCGTCTctctggagtccaatcagagactcttacAGGATctgctgaaacacacagagaacgaCCCAGAGATCATCAAGAAAATAATCCACAACCTCAAACGAGGACAGAAAAACAACGTCAGTCCAGAAAGATGGATGAATCTCTCACACTGCTTGATTGAGATGAAGGATAATTCTCTTGTGGAAGAAGTGcaaacattattaaaatctaaatcaaaGATTAAAAGTCTTTCTCTTGCTCAGTGCTCAACTTTATCAAACATGATCCTGATGTCAGAGGAGGTGCTGGATGAGTTTGATCTTAAAAAGTACAACATCAAATCTAAAGAGGGCAGAAGAAGGCTGTTACCCGCTGTGAGGAACTGTAGAAAAGCTCTACTGTCAGGCTGTAATCTCACTGATCAGTGCTGTGAAGTTGTGTCTTCAGTTCTGCAATCCTCAAACTCCcccctgagagagctggacctgagtaacaatgacctgcaggattcaggagtgaagctgatCTGTGCTGGACTGAAGAGCTCAAACTGTCAACTCAACACACTGAGATTATccggctgtatggtgacagaggaaggttGTGCGgctctggcttcagctctgagcTCAAACCcgtcacacctgagagagctggatctgagctacaatcacccAGGAGAAGCAGGACTCAAACTGCTCTCTGACAAACTCCAACACCTCCACAAACTCAGtgtggatcatggaggagagctCAGGATTAAATCAGGACCAGAGAAatacgCCTGTGAACTcacactggatccaaacacagcaaacacagacCTCactctgtctgaggagaacagaaagGCGACGTGTGTGGAGGAGAGTCAGTcttatcctgatcatccagacagatttgatgttcTTTTTCAGGTTGTGAGTAAAGAGAGTCTgactggacgctgttactgggagactCAATGGAGCGGAGATGAAGCTGTAATATCAGTGTGTTATAAAGGAATCCAGAGGAAAGGACTGAGTTATGACTGTAGGTTTGGATGTAATGATCAGTCCTGGAGTCTTGATTGCTCTTATCACTCATTCTCTGTCCGTCACAATAATGAACGCACACACATCTCAGCTCGTCCAGACTCCAGCAGGACAGTAGGAGTGTTTGTGGACGAGTCGAGCGGCTCTCTGTCCTTCTACAGCGTCTctgacacacacaaactcacacacttacacacattcaACACCACATTCACCGACACACTCCACGCTGGATTTACAGTTTATAATTATTCAGGCTCTTCAGTGTCTCTGTCAcatt

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000088908

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050717 True 2913 unprocessed_pseudogene 0.46 6 58702320 58710755

Neighbor

gene id symbol gene type direction distance location
XLOC_025844 CU571382.5 coding upstream 7283 58694176 ~ 58695037 (+)
XLOC_025843 NA coding upstream 19434 58682557 ~ 58682886 (+)
XLOC_025842 CU571382.1 coding upstream 29114 58669574 ~ 58673206 (+)
XLOC_025841 CU571382.1 coding upstream 32827 58667974 ~ 58669493 (+)
XLOC_025840 CU571382.4 coding upstream 36996 58663942 ~ 58665324 (+)
XLOC_025846 NA coding downstream 299 58711054 ~ 58712370 (+)
XLOC_025847 NA coding downstream 1945 58712700 ~ 58715206 (+)
XLOC_025848 NA coding downstream 95460 58806215 ~ 58811833 (+)
XLOC_025849 igl1c3 coding downstream 122551 58833306 ~ 58835177 (+)
XLOC_025850 NA coding downstream 124706 58835461 ~ 58857483 (+)
XLOC_025429 BX649540.1 misc upstream 28453284 30248739 ~ 30249036 (+)
XLOC_025837 NA non-coding upstream 22251 58654524 ~ 58680069 (+)
XLOC_025851 CABZ01044154.1 non-coding downstream 251149 58961904 ~ 58967097 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location