fam131a (LOC106568863)


Basic Information

Item Value
gene id fam131a
gene name LOC106568863
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57632382 ~ 57641650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985782.1
CCAACAATTTGGACAGAGCGCATATAGGTAGGCTGTAGCAGCCCATATCGCGGGGCGACAACCTGAGGCTTGTAGTGTGAAAGACGGGCGTGTTGTGCAAGGCTACAAGATAAATCATTTAAAAACCGTGGGAAATAACAACACGGGGCACCACGTTAGCATCTGTTAATGGGATTTGAGACAAGCTCATTGTGATCATGTGCGACGCTCGACGGTGCCGCAACCTCTATTCGGTTTACAGGTAAAATTTCAGGAAGCTGAAATGATCCCCAAGTCAAGAAAATCTTCAGACACGAGAAAGGCAGTCAGCATCCAGGAGATTGCTGCTCTGGCCAGATCCTCTTTAAATGgcatATCCCAGGCGATGAAGGACCATGTGACCAAGCCCACGTCCCTGCAGGGTGGCAGGGTTGCCCACCTCATAGAGTGGAAGGGTTGGCCCAAACCCACAGACTCCCCCACggaccccctccacacacacttcAACTCCTACTGCCACCTCACTGAGGGGGAACAGGAGGCGCGCTTCGCTGCAGGAGTGGCAGAGCAGTTTGCTATCGCTGAGGCAAAGCTGAAAGCCTGGGCTTCtgtggatgatgatgatgaggaggaagcTGGCAAAGAGTTTCTCCAGaacaacagaaacacactcaCACGCTCTACCCGCTCAGGTGTTCTGACTCTTTGCTCCTCCCTCAGACACCGCAACGTCCAATCACGAGCCCCGAGTGTCATTCCAGGCTGAGATTGGCAGCATTAAAGTTCCACCCTCTATCAGCTCAACCATTCCCGTTGGCTCTAGCAGCAACAGCCTGCACTGTGATAGGCCCACATCTAAGAATGACCCAGCTCCACAGCAAAATGACCGGCCTATTCTAGAGAGTGACCGGGCTAGCCCATTCCCCAGAGAGGGGGAACTAGTGGATGGTGAGGATCAGCCTGTACCACAGCTAGAGACCGGTGGGGGTGTCTGTATCGTCCACAAACCTGACTGGAGGCCAAGGATCAGAAGCAGTAGGTTTGACTCCTGCTATTCAACCTCTCACTCTGAGTCTCTTGGAGAGGAGGAAGCGGAAGAGGAAGACGAAGAAGGGAGTGTGTTTCAGGAAGGTAGAGAGTGGCACTCCTGCCAGAGCCAGAGAAGCTTC
>XM_021613115.2
CCAACAATTTGGACAGAGCGCATATAGGTAGGCTGTAGCAGCCCATATCGCGGGGCGACAACCTGAGGCTTGTAGTGTGAAAGACGGGCGTGTTGTGCAAGGCTACAAGATAAATCATTTAAAAACCGTGGGAAATAACAACACGGGGCACCACGTTAGCATCTGTTAATGGGATTTGAGACAAGCTCATTGTGATCATGTGCGACGCTCGACGGTGCCGCAACCTCTATTCGGTTTACAGGTAAAATTTCAGGAAGCTGAAATGATCCCCAAGTCAAGAAAATCTTCAGACACGAGAAAGGCAGTCAGCATCCAGGAGATTGCTGCTCTGGCCAGATCCTCTTTAAATGgcatATCCCAGGCGATGAAGGACCATGTGACCAAGCCCACGTCCCTGCAGGGTGGCAGGGTTGCCCACCTCATAGAGTGGAAGGGTTGGCCCAAACCCACAGACTCCCCCACggaccccctccacacacacttcAACTCCTACTGCCACCTCACTGAGGGGGAACAGGAGGCGCGCTTCGCTGCAGGAGTGGCAGAGCAGTTTGCTATCGCTGAGGCAAAGCTGAAAGCCTGGGCTTCtgtggatgatgatgatgaggaggaagcTGGCAAAGAGTTTCTCCAGaacaacagaaacacactcaCACGCTCTACCCGCTCAGACACCGCAACGTCCAATCACGAGCCCCGAGTGTCATTCCAGGCTGAGATTGGCAGCATTAAAGTTCCACCCTCTATCAGCTCAACCATTCCCGTTGGCTCTAGCAGCAACAGCCTGCACTGTGATAGGCCCACATCTAAGAATGACCCAGCTCCACAGCAAAATGACCGGCCTATTCTAGAGAGTGACCGGGCTAGCCCATTCCCCAGAGAGGGGGAACTAGTGGATGGTGAGGATCAGCCTGTACCACAGCTAGAGACCGGTGGGGGTGTCTGTATCGTCCACAAACCTGACTGGAGGCCAAGGATCAGAAGCAGTAGGTTTGACTCCTGCTATTCAACCTCTCACTCTGAGTCTCTTGGAGAGGAGGAAGCGGAAGAGGAAGACGAAGAAGGGAGTGTGTTTCAGGAAGGTAGAGAGTGGCACTCCTGCCAGAGCCAGAGAAGCTTCTTCTCCGACAGAGGCTCGTCGGGAGTGGCGTCATTCGATGAGGAAGAgtaggaggtagagaaagaggttggaggaggaggaggagaaaagagggagcATTAGATGTTGTGGATGTTGTGTTTTTCATCTTGTAGGTGTTCCCCTTGGATAGTCTGTCGACTCTTAGATATGTAACTTAGTGATGGCTAGCCTTTATTCATCTTCCatccttcctttccttccttcctcctgtttctctttctttcctccaattcttccttccttccttttctCGGCTTGTCTCTCCCTGCTTCCTCTGCACCCTgtttcttttctctttctcttctttttcACTTCCTTGCCACTTCTTTGCTGATGTTACGCTGTATTTGAGAGTTGAAACTCGATTCCCGAATACTGTGTTCAAACGGAGAGGTTTTATGTTGTTATTTCACTGGTTTTCTATGGATTGTTATTGTCGTGTTTTCCCAGGACCATGATGTGAAGTCAAGTAATGGGGTTTGTCCTGGAtgaataaaacatgatttaaaaaaagaa

Function

NR:

description
uncharacterized protein LOC110530220

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985782.1 False 1148 mRNA 0.53 5 57632382 57641113
XM_021613115.2 True 1657 mRNA 0.50 5 57632382 57641650
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Neighbor

gene id symbol gene type direction distance location
eif4g1a NA coding upstream 7128 57597835 ~ 57625254 (+)
LOC118965680 NA coding upstream 8981 57623271 ~ 57623401 (+)
LOC118965660 NA coding upstream 9542 57622713 ~ 57622840 (+)
LOC110530216 LOC106568865 coding upstream 50189 57572651 ~ 57582193 (+)
LOC110530217 LOC106568867 coding upstream 60006 57558028 ~ 57572376 (+)
LOC110530222 LOC106568862 coding downstream 55364 57697014 ~ 57700551 (+)
LOC110530223 per2 coding downstream 125001 57766651 ~ 57798129 (+)
LOC110530227 LOC106568858 coding downstream 163735 57805385 ~ 57811427 (+)
LOC118965533 NA coding downstream 209149 57850799 ~ 57854417 (+)
trnap-agg-8 NA coding downstream 274350 57916000 ~ 57916071 (+)
G725912 NA non-coding upstream 47855 57584259 ~ 57584527 (+)
G725906 LOC106590568 non-coding upstream 79238 57552838 ~ 57553144 (+)
G725905 NA non-coding upstream 82364 57549790 ~ 57550018 (+)
G725949 NA non-coding downstream 36201 57677851 ~ 57678662 (+)
G725969 NA non-coding downstream 81194 57722844 ~ 57723061 (+)
G726031 NA non-coding downstream 189739 57831389 ~ 57836550 (+)
G726045 NA non-coding downstream 216576 57858226 ~ 57860539 (+)
G725907 LOC106581475 other upstream 76900 57554723 ~ 57555482 (+)
G725878 NA other upstream 116988 57513606 ~ 57515394 (+)
LOC110530213 LOC106568871 other upstream 154653 57421244 ~ 57478855 (+)
G725573 NA other upstream 648097 56983570 ~ 56984285 (+)
si:ch211-267e7.3 LOC106568906 other upstream 1914145 55710156 ~ 55724271 (+)
G727161 NA other downstream 715389 58357039 ~ 58358245 (+)
G727348 NA other downstream 1005209 58646859 ~ 58674005 (+)
G728057 LOC100136012 other downstream 1339281 58980931 ~ 58981271 (+)
LOC110530248 crem other downstream 2118825 59748668 ~ 59768093 (+)

Expression

fam131a(LOC106568863) Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 25.
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fam131a(LOC106568863) Expression in each Bioproject

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fam131a(LOC106568863) Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 600.
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Co-expression Network