trnap-agg-8


Basic Information

Item Value
gene id trnap-agg-8
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57916000 ~ 57916071 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnap-agg-8
ggctcgttggtctaggggtatgattctcgcttagggtgcgagaggtcccgggttcaaatcccggacgagccc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnap-agg-8 True 72 mRNA 0.58 1 57916000 57916071

Neighbor

gene id symbol gene type direction distance location
LOC118965533 NA coding upstream 61583 57850799 ~ 57854417 (+)
LOC110530227 LOC106568858 coding upstream 104573 57805385 ~ 57811427 (+)
LOC110530223 per2 coding upstream 117871 57766651 ~ 57798129 (+)
LOC110530222 LOC106568862 coding upstream 215449 57697014 ~ 57700551 (+)
fam131a LOC106568863 coding upstream 274350 57632382 ~ 57641650 (+)
trnai-aau NA coding downstream 6479 57922550 ~ 57922623 (+)
trnam-cau NA coding downstream 11742 57927813 ~ 57927885 (+)
trnag-ucc-2 NA coding downstream 12304 57928375 ~ 57928446 (+)
LOC110530231 LOC106568853 coding downstream 16224 57932295 ~ 58136178 (+)
LOC110530232 LOC106568852 coding downstream 249576 58165647 ~ 58268703 (+)
G726063 LOC106568854 non-coding upstream 13331 57901514 ~ 57902669 (+)
G725988 NA non-coding upstream 21643 57893810 ~ 57894357 (+)
G725985 NA non-coding upstream 38248 57876825 ~ 57877752 (+)
G726053 NA non-coding upstream 39724 57874589 ~ 57876276 (+)
G726051 NA non-coding upstream 48593 57866178 ~ 57867407 (+)
G726165 NA non-coding downstream 152644 58068715 ~ 58069350 (+)
G726183 NA non-coding downstream 181959 58098030 ~ 58098854 (+)
G726186 NA non-coding downstream 184770 58100841 ~ 58101688 (+)
G726210 NA non-coding downstream 241761 58157832 ~ 58158712 (+)
G727091 NA non-coding downstream 312459 58228530 ~ 58231957 (+)
G725907 LOC106581475 other upstream 360518 57554723 ~ 57555482 (+)
G725878 NA other upstream 400606 57513606 ~ 57515394 (+)
LOC110530213 LOC106568871 other upstream 438271 57421244 ~ 57478855 (+)
G725573 NA other upstream 931715 56983570 ~ 56984285 (+)
G727161 NA other downstream 440968 58357039 ~ 58358245 (+)
G727348 NA other downstream 730788 58646859 ~ 58674005 (+)
G728057 LOC100136012 other downstream 1064860 58980931 ~ 58981271 (+)
LOC110530248 crem other downstream 1844404 59748668 ~ 59768093 (+)
G730206 NA other downstream 3124497 61040568 ~ 61042129 (+)

Expression


Co-expression Network