trnag-ucc-2


Basic Information

Item Value
gene id trnag-ucc-2
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 57928375 ~ 57928446 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>trnag-ucc-2
gcgttggtggtatagtggtgagcatagctgccttccaagcagttgacccgggttcgattcccggccaacgcA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
trnag-ucc-2 True 72 mRNA 0.56 1 57928375 57928446

Neighbor

gene id symbol gene type direction distance location
trnam-cau NA coding upstream 490 57927813 ~ 57927885 (+)
trnai-aau NA coding upstream 5752 57922550 ~ 57922623 (+)
trnap-agg-8 NA coding upstream 12304 57916000 ~ 57916071 (+)
LOC118965533 NA coding upstream 73958 57850799 ~ 57854417 (+)
LOC110530227 LOC106568858 coding upstream 116948 57805385 ~ 57811427 (+)
LOC110530231 LOC106568853 coding downstream 3849 57932295 ~ 58136178 (+)
LOC110530232 LOC106568852 coding downstream 237201 58165647 ~ 58268703 (+)
LOC110530233 LOC106599529 coding downstream 406748 58335194 ~ 58649978 (+)
LOC118965657 NA coding downstream 744121 58672567 ~ 58672675 (+)
LOC110530235 LOC100136455 coding downstream 1128970 59057416 ~ 59084854 (+)
G726063 LOC106568854 non-coding upstream 25706 57901514 ~ 57902669 (+)
G725988 NA non-coding upstream 34018 57893810 ~ 57894357 (+)
G725985 NA non-coding upstream 50623 57876825 ~ 57877752 (+)
G726053 NA non-coding upstream 52099 57874589 ~ 57876276 (+)
G726051 NA non-coding upstream 60968 57866178 ~ 57867407 (+)
G726165 NA non-coding downstream 140269 58068715 ~ 58069350 (+)
G726183 NA non-coding downstream 169584 58098030 ~ 58098854 (+)
G726186 NA non-coding downstream 172395 58100841 ~ 58101688 (+)
G726210 NA non-coding downstream 229386 58157832 ~ 58158712 (+)
G727091 NA non-coding downstream 300084 58228530 ~ 58231957 (+)
G725907 LOC106581475 other upstream 372893 57554723 ~ 57555482 (+)
G725878 NA other upstream 412981 57513606 ~ 57515394 (+)
LOC110530213 LOC106568871 other upstream 450646 57421244 ~ 57478855 (+)
G725573 NA other upstream 944090 56983570 ~ 56984285 (+)
G727161 NA other downstream 428593 58357039 ~ 58358245 (+)
G727348 NA other downstream 718413 58646859 ~ 58674005 (+)
G728057 LOC100136012 other downstream 1052485 58980931 ~ 58981271 (+)
LOC110530248 crem other downstream 1832029 59748668 ~ 59768093 (+)
G730206 NA other downstream 3112122 61040568 ~ 61042129 (+)

Expression


Co-expression Network