XLOC_025850



Basic Information


Item Value
gene id XLOC_025850
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information


Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 58835461 ~ 58857483 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence


>TCONS_00052834
ATCAACACTTATGAAAGAATCTGAAGTGCTGAAAGCTGCTTTCATTACAGAAATGTCCACTTCCCTAAAATATTGAGTCAAATTAGATTCACTCAGTGAAGCATGAAAACACCTGCAGAGGAGATGAAGACACCAGAAAGTCTCTAAACAGCAAAGACACAAAGGAACCATGAAATAATGTATATAAcctataaatattacaaactatGAAGTTTACAAACTTTTAAAGCCACTATAATGAGGAATAAATGAGAATAATGTAGAATAATAAACTCAGAAGTACGACTAAGTGAACcatatttaaagttaattttatgatACAAAGTGAACAAAACAAACTAAGCAACTTTGCTtggcaaaaacatcaacaatGAGGAAGAAACAATCTCACTAAACACAGAAGCACATGACTAGATAACATGAGGGAAAGGGAATCACATGAGTGGGTAAAACtgtaataactacacactatgaatcatttaataagcattagcaaatagtgaattcataatttgttaagcattaatgctacattaataacattagttaagcagtttataactgcag

Function


GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA


RNA id representative length rna type GC content exon number start site end site
TCONS_00052834 True 567 lncRNA 0.31 2 58835461 58857483

Neighbor


gene id symbol gene type direction distance location
XLOC_025849 igl1c3 coding upstream 284 58833306 ~ 58835177 (+)
XLOC_025848 NA coding upstream 23628 58806215 ~ 58811833 (+)
XLOC_025847 NA coding upstream 120255 58712700 ~ 58715206 (+)
XLOC_025846 NA coding upstream 123091 58711054 ~ 58712370 (+)
XLOC_025845 CU570691.1 coding upstream 124706 58702320 ~ 58710755 (+)
XLOC_025851 CABZ01044154.1 coding downstream 104421 58961904 ~ 58967097 (+)
XLOC_025852 CABZ01044156.1 coding downstream 126980 58984463 ~ 58989816 (+)
XLOC_025853 NA coding downstream 167451 59024934 ~ 59027837 (+)
XLOC_025854 rasd4 coding downstream 194020 59051503 ~ 59052994 (+)
XLOC_025855 MGAT5B coding downstream 259653 59117136 ~ 59167824 (+)
XLOC_025429 BX649540.1 misc upstream 28586425 30248739 ~ 30249036 (+)
XLOC_025844 CU571382.5 non-coding upstream 140424 58694176 ~ 58695037 (+)
XLOC_025856 NA non-coding downstream 354677 59212160 ~ 59224196 (+)
XLOC_025865 NA non-coding downstream 1180067 60037550 ~ 60043897 (+)
XLOC_025868 NA non-coding downstream 1208905 60066388 ~ 60067768 (+)

Expression



Co-expression Network