LOC110530301 (LOC106569066)


Basic Information

Item Value
gene id LOC110530301
gene name LOC106569066
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 62034615 ~ 62046177 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613224.2
ACACACAGGGAGGCTAAACTGCGACTATGAGATCCAAAGTATGATTTCAGTATATAACCAATTAACATAACTCAATTAGTAATACAAATAGTCTGACAAAAGCGAAGAGTATTTTAGTTCAGCACATTCAGTAGGtggtgacacatctccttcatctAGACGTGTAGAAATAGGACACGGACAACAGAAACAGTGATACAATTGGAAGAGCTCAGGCCAGAAAGTGCTGAGGGCAGTGACGCTCTGTATCCTGCGAGGAGACTGGGATACTGCCGCATCCAAATGAaccttgcctctctctctgcggTCGCTAATAGCAAAACAAAGGAGAACAAATCGTTAGTTGCAGAAAAAAACGAATATCCAGTCATATCATGACGGAGAACACTAAAACGCACGTTATATTGCTGTCATGTGGAAGTTTTAACCCCATCACTAAAGGACACATTCATATGTTTGAGAAAGCCAAAGAATACCTGCACAAAACAGGGAAGTTCATTGTGATTGGGGGCATCATCTCTCCTGTACATGACTCCTATGGCAAACCGGGTCTGGTCCCCAGCAGACATCGTCTCACCATGTGTCAACTGGCAGTCCAGTCCTCTGACTGGATCAGAGTGGATCCCTGGGAGTGCTACCAGGACACATGGCAGACTACGTGCAGTGTGTTGGAGCATCATCGTGACCTCATGAAGAGAGTCACAGGGTGTATTCTATCCAATGTGAACACACCGTCCACAACTCCAGTGATCGGCCAACCACAGAATAAGACTCAGACTGCCATCTATCAGAACCACAACACAGTGAACAACAAGCCCACTGCCATTAAGCTGTGGGGGAAGATGAGTGAGAGCTTGGGTAAAATTTGCTGTGTTCGCCCACACATGGACCGTTTCACCTTTGTAGATGAAAATGCTAACCTTGGTACTGCAATGCGATATGAGGAAATTGAGTTGCGCATCTTGCTCCTATGTGGCAGTGATCTTCTGGAGTCATTCTGCATCCCTGGCCTATGGAAAGACAGTGATATGGAGGTGATTGTGGGAGACTTTGGGATTGTTGTTGTGCCTCGGGACGGAGTTGATACAGAAAGGATAATGAACCATTCCTCTGTGCTGCGCAAGTACAAGGATAACATCACTGTCGTAAAAGATGATGCCAACCACCCTATGTCCATTGTCAGTTCAACCAAGAGCAGACTGGCCCTGCAGCATGGTGACGGCCATGTAGTGGACTACCTGAACCAGCCAGTCATCGACTACATCCTGCAGAGTCAGCTCTACATCAATGCTTCTGGATAGGAACTACTGCTTTGGCCTGCTGGCATATTGTCCCTGTCTGTCTTTCATGTGAAACGTATACTCCTCTTGAGCTACTGCTTTTCCATTTAAAGATATCCATATCCCTTCTTACTGTATCATGGTGACTCATCTGACCTGTGGATGTACAGCGAGGTGCCTgagagctgtgtgtatgtgtggaccACCTTCACAACTGACCTTGTGTTGGCTGCGCCGGCCGGgcgggatagagaggggggatggggtTTTGGGACATGTCCCAAATAGCATAACTTTCCCTattgtgcactacatttgacccgGTCAACAATAGTGCActttaatagggaatagggtgcaatttgggatgctaACTTGGTGTCATTAAGAGAGGGTGCAGAGATGGTAACCTATTGAATTTGGGCCTTTGCTGTTGATTTAAAATATGTATGTTTTTAGACTGCATGCTTAGAATGTTTCTGTTTTGGCATGAGTACTTACTCACTTTGTAGATAGATGTTGTGAAAGTGTTTGCAAAAAAACGAACATATAGTGGGTATCCACCTCTCACTTCATTTTCTGTTCACTCCAAGTCTActttatgtacagtatctgtattaATGTACCTGCGACTGCACATCAATGCCTAAATGTTTGGTTTTCAGTGGGCATTGATGCAAGATGTACATCTGTTTGCACATAAGAGAATGATTTGAACGTTCATTTATTTTTGTGTGCAACGGATTTTTACACGTTTCTTCTGCTTGCCACCGAGAAAATGACCACGCCTCCCAAAACAAATGCAATGAACCTGTTTCTTACTGTGTGCTATGTAGCTAGATTCTTTTACATATAGAGGAAAAAACAACAGCACAAACTATAGAAGTGCATTTCATGTGCCCTGGGGATGAGTTCACATATGCAAGTCTCTCACTCTCCTTGCACATAACACTGTACTGAGCTGCAGGAGCCTCTATGGAATCAACAGACCCATTGTCATAATAACATCAATCTGAAATAAATGTGTTCTAATGTTGTACTGCAAA

Function

NR:

description
nicotinamide/nicotinic acid mononucleotide adenylyltransferase 2

GO:

id name namespace
GO:0009435 NAD biosynthetic process biological_process
GO:0005794 Golgi apparatus cellular_component
GO:0004515 nicotinate-nucleotide adenylyltransferase activity molecular_function
GO:0005524 ATP binding molecular_function

KEGG:

id description
K06210 NMNAT; nicotinamide mononucleotide adenylyltransferase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613224.2 True 2326 mRNA 0.44 12 62034615 62046177

Neighbor

gene id symbol gene type direction distance location
LOC110530952 LOC106569062 coding upstream 659151 61370585 ~ 61375464 (+)
LOC118965539 NA coding upstream 689730 61343405 ~ 61348640 (+)
LOC110530280 LOC106569045 coding upstream 695003 61327148 ~ 61339612 (+)
LOC110530279 armc1 coding upstream 728937 61297688 ~ 61305678 (+)
LOC110530278 pde7a coding upstream 738446 61245242 ~ 61296169 (+)
LOC110530305 klhl20 coding downstream 242393 62288570 ~ 62299158 (+)
LOC110530308 LOC100380755 coding downstream 575068 62621245 ~ 62881609 (+)
LOC110530310 LOC106569074 coding downstream 925382 62971559 ~ 63003590 (+)
LOC110530311 LOC106569075 coding downstream 1013347 63059524 ~ 63187183 (+)
LOC118965541 LOC106569076 coding downstream 1142256 63188433 ~ 63206250 (+)
G730752 NA non-coding upstream 53925 61957389 ~ 61980690 (+)
G730747 LOC106569062 non-coding upstream 91215 61942485 ~ 61943400 (+)
G730713 NA non-coding upstream 135364 61895709 ~ 61899251 (+)
G730694 LOC106569104 non-coding upstream 159948 61867561 ~ 61874667 (+)
G730377 NA non-coding upstream 224261 61370027 ~ 61810354 (+)
G730818 NA non-coding downstream 19347 62065524 ~ 62065812 (+)
G730819 NA non-coding downstream 19654 62065831 ~ 62066057 (+)
G730821 NA non-coding downstream 21027 62067204 ~ 62067569 (+)
G730813 LOC106569067 non-coding downstream 21957 62068134 ~ 62070889 (+)
G730852 NA non-coding downstream 71398 62117575 ~ 62119475 (+)
G730690 NA other upstream 173496 61860485 ~ 61861119 (+)
G730629 NA other upstream 219005 61815071 ~ 61815610 (+)
G730590 NA other upstream 337974 61696147 ~ 61696641 (+)
G732052 NA other downstream 356772 62402949 ~ 62404191 (+)
G732350 NA other downstream 751524 62797701 ~ 62882948 (+)
LOC110530316 LOC106569082 other downstream 1329319 63375496 ~ 63430577 (+)
G733571 LOC106569085 other downstream 1501410 63547587 ~ 63548743 (+)

Expression


Co-expression Network