Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC118965630 |
| gene name | NA |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 63276527 ~ 63279438 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: calcyclin-binding protein isoform X1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| LOC118965630 | True | 687 | mRNA | 0.39 | 5 | 63276527 | 63279438 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110529126 | NA | coding | upstream | 17959 | 63252168 ~ 63258568 (+) |
| LOC118965541 | LOC106569076 | coding | upstream | 70281 | 63188433 ~ 63206250 (+) |
| LOC110530311 | LOC106569075 | coding | upstream | 89344 | 63059524 ~ 63187183 (+) |
| LOC110530310 | LOC106569074 | coding | upstream | 272937 | 62971559 ~ 63003590 (+) |
| LOC110530308 | LOC100380755 | coding | upstream | 394918 | 62621245 ~ 62881609 (+) |
| LOC110530313 | LOC106569079 | coding | downstream | 1568 | 63281006 ~ 63288829 (+) |
| LOC110530316 | LOC106569082 | coding | downstream | 96603 | 63375496 ~ 63430577 (+) |
| ptch2 | LOC106569083 | coding | downstream | 155921 | 63435359 ~ 63466410 (+) |
| LOC118965542 | NA | coding | downstream | 280218 | 63559656 ~ 63570616 (+) |
| atp6v0b | atp6v0b | coding | downstream | 323760 | 63603198 ~ 63612720 (+) |
| G733175 | NA | non-coding | upstream | 7077 | 63269241 ~ 63269450 (+) |
| G733172 | NA | non-coding | upstream | 8979 | 63267329 ~ 63267548 (+) |
| G733170 | NA | non-coding | upstream | 11123 | 63265101 ~ 63265404 (+) |
| G733169 | NA | non-coding | upstream | 11510 | 63264524 ~ 63265017 (+) |
| G733168 | NA | non-coding | upstream | 12099 | 63263872 ~ 63264428 (+) |
| G733180 | LOC106569080 | non-coding | downstream | 11530 | 63290968 ~ 63293802 (+) |
| G733203 | NA | non-coding | downstream | 51393 | 63330831 ~ 63331041 (+) |
| G733204 | NA | non-coding | downstream | 51945 | 63331383 ~ 63331697 (+) |
| G733206 | NA | non-coding | downstream | 55747 | 63335185 ~ 63335398 (+) |
| G733210 | NA | non-coding | downstream | 61953 | 63341391 ~ 63341636 (+) |
| G732350 | NA | other | upstream | 393579 | 62797701 ~ 62882948 (+) |
| G732052 | NA | other | upstream | 872336 | 62402949 ~ 62404191 (+) |
| G730694 | LOC106569104 | other | upstream | 1404967 | 61867561 ~ 61874667 (+) |
| G730690 | NA | other | upstream | 1415408 | 61860485 ~ 61861119 (+) |
| G733571 | LOC106569085 | other | downstream | 268149 | 63547587 ~ 63548743 (+) |
| LOC110530334 | LOC106569251 | other | downstream | 1266842 | 64546280 ~ 64551340 (+) |
| G734690 | LOC106569249 | other | downstream | 1339602 | 64619040 ~ 64620007 (+) |
| LOC110530343 | LOC106569291 | other | downstream | 1417875 | 64697289 ~ 64698526 (+) |
