LOC110530357 (LOC106569232)


Basic Information

Item Value
gene id LOC110530357
gene name LOC106569232
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65511463 ~ 65520143 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613344.2
AGCTAACCGGATGTTACGTAAAACTACAAACAACCCAAGGCTGTTGAATTGTCTGGGGCAAAGCAGCATTTTCTTGAATAACCATAACTGGAAAACGATAATAAATCACTACTGGAAACTTATCAGGCTATAGAAGAAAACTGGGACGGCTGAAGAGCTAGGTTGGAAAAAGTTTATACAAAACCATGGTGGAATATTATCACATTTTAGGAGTCCTAAGAAATGCATCTCAAGAAGACATAAAAAAAGCGTACAGAAAATTGGCACTAAAATGGCATCCTGACAAAAACCCAGAAAATAAGGAAGAAGCAGAGAAAAAGTTCAAAGAACTTTCTGAGGCCTATGAGGTTCTGTCAGATGCCAACAAGAGGAACATGTATGATCGCTATGGTAAAGCAGGCCTAACAACAAACAGTGGAGGAGGTGTTGGACATTACCACAATGGTGATCATTTCAACGAAGGGTTCACGTTCCGCAATCCTGAAGATGTCTTCAGAGAGTTCTTTGGCGGTCGAGATCCTTTTGCGGATTTCTTTGGAGGGGATCCGTTTGGGGATGAGTTCTtcggtggagggaggaggcacCACAGGGGAGTGAGCAGGAGTCGAACGGGGGGACCCTTCTTCGGGGGATTTGGTGGCTTCCCACCGTTTGGTGCAGGCTTCACAGCGTTTGACCCAGGCTTTACCTCTTTCGGACACATGGGTCACATGGGCCATATGGGTCCTATGGGCCATATGAGTCACATGGGTcatctgggaggaggaggaggaggccatGGTGGCTTCACTgccttctcctccacctcttttGGCGgcgggggtggaggtggaggaggcggGATGGGCAACTTCCGCTCCGTATCAACCTCCACGAAATTCATCAACGGCAGGAAAATCACAACAAAAAGAATTGTGGAGAATGGACAGGAACGCGTAGAGGTGGAAGAAGACGGACAGTTAAGATCACTAACCGTCAATGGGGTAAAGCCTATTGCCACAGTTCAAGCAGTCCAACAGGAGGAGTGCAGACAAACTGTTACTGCACACTCTTCCAGTGCACATGCCTCCcggtcctctgttccccatcctCCTTGTCATCATGTAAAGACTTCCCCCCACAGGCCCActccagacagagaggagggaaggaacccAGCTTCAGTACACAGTGAAAACAAGAGGAAGAAACCCATGCCTGAGCCCACAGAGGATGCCAAAAAGAGAAAAACATGATCCAGTACACACAGATCCTTGTCCTCCTAGTCAGCTACGGAAACAATATGTTATTGATACACCTTTAACAATGAATATTGTTTTAAAGGACACTTTAATATGGGGTCCTCAAAGCGCTTTAGCAAGAATGCACAGATACTGTAAATGTATAATCCTGACTCGTTTTCTATTATATATCCTATTTTACGCCCATAGGAAAATGTGGGGTGCATCCGACTAAATGATTCAGAAAACCATGCAAAATACAATTGAAATGAGTTT

Function

NR:

description
dnaJ homolog subfamily B member 6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613344.2 True 1496 mRNA 0.46 10 65511463 65520143

Neighbor

gene id symbol gene type direction distance location
LOC110530354 LOC106569236 coding upstream 89484 65416276 ~ 65421979 (+)
si:ch211-207d6.2 kiaa1217 coding upstream 124923 65300995 ~ 65386540 (+)
LOC110529128 LOC106569290 coding upstream 248542 65261636 ~ 65262921 (+)
dlgap1a LOC106569241 coding upstream 257490 65142215 ~ 65253973 (+)
cdh18a LOC106569242 coding upstream 424641 65007887 ~ 65086822 (+)
LOC110530359 LOC106569230 coding downstream 41550 65561693 ~ 65587630 (+)
LOC110530360 tmm70 coding downstream 79188 65599331 ~ 65602141 (+)
pi15b LOC106569289 coding downstream 134296 65654439 ~ 65657897 (+)
LOC110530364 LOC106569228 coding downstream 139146 65659289 ~ 65670369 (+)
LOC110530365 LOC106569227 coding downstream 156684 65676827 ~ 65680382 (+)
G735573 NA non-coding upstream 19314 65491852 ~ 65492149 (+)
G735570 NA non-coding upstream 24316 65486781 ~ 65487147 (+)
G735569 LOC105024267 non-coding upstream 26156 65485020 ~ 65485307 (+)
G735538 NA non-coding upstream 63833 65447384 ~ 65447630 (+)
G735537 NA non-coding upstream 69180 65439098 ~ 65442283 (+)
G735619 NA non-coding downstream 54962 65575105 ~ 65600245 (+)
G735656 NA non-coding downstream 124683 65644826 ~ 65645051 (+)
G735678 NA non-coding downstream 168563 65688706 ~ 65750913 (+)
G735705 NA non-coding downstream 227633 65747776 ~ 65775479 (+)
G736463 NA non-coding downstream 375046 65895189 ~ 65895623 (+)
G735512 NA other upstream 108364 65402223 ~ 65403099 (+)
G735064 NA other upstream 680560 64830624 ~ 64830903 (+)
G735047 NA other upstream 689418 64821615 ~ 64822045 (+)
LOC110530343 LOC106569291 other upstream 813594 64697289 ~ 64698526 (+)
si:ch211-106n13.3 LOC106569214 other downstream 604065 66100360 ~ 66125932 (+)
G737194 LOC106569203 other downstream 1134519 66654662 ~ 66655753 (+)
kncn kncn other downstream 1179543 66699211 ~ 66704200 (+)

Expression


Co-expression Network