LOC110529130 (LOC106569225)


Basic Information

Item Value
gene id LOC110529130
gene name LOC106569225
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 65730055 ~ 65735374 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021611269.2
CTCAAGCTGTCACACCGTTGTTGGCTGTTGCCATTTGGAAAATGAGAAATACAGAAGGCAAATGAAGAGCTGATGAGAACAAGAGGATCCTTTGAGGATGACAAGGTCTTTAATGTCCTAATACTTCAGAGAACAAGCTTTATTGATGGATTAAAGGGGACATTCGGAGACATCCTCCTCAAGTGGCTTTTGAACCAGAACAAATGTTAGATCATGTTCCAGTTAGGGGTCATACTGACTTCTGCTTCCTCAACAAGACCTAGCTAAGTATTTACACTTTGAATGAGAGAGAATTGGTCAGATGAGATTGGGATTTTGGTCCCTTGTtcttgttgttgtggtggatTTTAACCCGTGAGTTAAATGGTGCTGATCATAGAGGActcaggtggaggtggagggacgTTGTTAAAAGTTCAGCAGAATGGGATCTCTGGAGGTCAGGCGGGGGCTGTCAGGGGTCCCATAAATGAGGAGTTGGAGACAGTCGCAGACGACAAAAATGAGGATCCTAATGTGGGAGACAATGAGGACAACAACTATTACGATGACGACGACGATGATGTCTATCAGGAATTTGAAGAGTTTGACTTTGACACATTGCCAGATCGGCCAGAGGATAGCAGGAGTATCGCCTCTGATGACTCTTTTTATCCACCTGATGAGTCTCTCAAATACAGGACTCCCAGCCCAGTCACCCCTGAACCGCTGTCTTTCTTCATGGCCTGCTCCAATAACAATTCCATCATAGTGAAGATTATGATAAGGCAAGGGGTGACAGAGGAGgaagtgagagaaacagataagAACAACAGAAATGGGCTGATAGTAGCCTGTTACATGGGCTGGGTGGATGTGGTCATAGCGCTCTCTCAGTGTCCCCACATCGATGTCAACTGGCAAGACAACGAGGGGAATACAGCCCTCATGACAGCTGCTCAAGCTGGTCACATTATGATATCCAGCTACTTGATCAACTACTTCTCCAACCTGGACCTAGAGCGTAGGAACTGCCATGGATTCACAGCTATGATGAAGGCAGCCATGCAAGGGAGGGCAGATGTTGTTCGTTTGCTCATGTTGTCAGGAGCGGACGTGGAGGCGAGGGACTACGGGCGCAAGATGACCTCCAGGGAGTGGGCTTTGTTCACATGCCGCTACGAGACGGCCTACCTGATGATGCGTCTGATGGCCCAGCCGTGCGCCGAGCAGTTCTGTGAATCCTACAAGCTGGAGTGGCCCATGCTGCAGGAGCTGGTGGCCCAACGCCAGGAACCCAAGAACTGCTGGCAGAAGGTGGCAGACAAAGCCTGCTGTAGGTTCTCCCTCCGCATGAAGACGGACCCTGTGGACGACGGTGTGATGGACCACATGGTGCGCATCACCACCGCCCTGTCCAGCCCATTGATCGCCACCGCCTGCCACACCGTGGCCCTGAGAAGCCCGCCCTGCATTGGGAAGCGGCGCTATGCTGTACCGGAGATCCTCAGGAAGCAGCGAGTGGACGAGCTGAAGCGCCTGGGGCCCGACCGGATCAACAACTACAAGAAGCTGTTCAATAACTCCCGGGTGCAGTTGGTTCCTAAGAAGACAGACCGGAGGGCCAGCCTGCAGACCCAAATGTTGCAGGAGGTTGCGGTGGCCGGTACGTCTGCCCTGAGGCGTGCCAGCTTGCTGCCCCTGAACATGATGAGGAGGAGCAGCGTCAGGCCGGGCATTGTGATCCCCAAGGTGAGGCTGTGCAAGGCCCCCTCGGGGCCCGCCTCCgagaagagaaggaagagcaAGGACCCTGCGCTCCTCCAGCTCCCCAAGTGGAGGTACAAACAGgctaaggaggagaggaggaggcaagaggaggaggagaagcagagaCGTTTTCCCACAGTGAGGAGGCGGTGAAAGAATTGAGCTATGAGGAGAGGTCAAAAAAATGTCAGGAGCCTTGGGAGGTGAGCCAACCTTTTATTACAATTGGTACTGAGCTGAAGAGTTGAAGTGATCACCTGCATTCGAGATTTTAAGGATTTTGCTACTAGATTATACTGTAGCCATGGAGCACCATGTCTTCCTGTCCTACATTTGGGTATTCTGTGTTGGGATGGGAACAATTGGCTTGAACTGTGCACTCACTGTGAGGAATTAATACTTGAACTTTGATCCAGATTTATTTTTGTATGCATTCTTCAGATTATGACTATGTTTGATATTTCCATTGTAAAAGGATAACTCACTCTAACACAATATTACCTCTGCACATTGTTTATTGTGTCAACGTTTCAGTCAGACATCCCAAAAAAATACTGACACCTACTGCATATTTAGGTTTATCTGAATGTTAAGGATATTCTCAAGGCAGACAGTACACTAATCAGTTGGATGTTTCCTCAACTGTTAATAAAGGATACATGTTAGTACACTCCCCTATgtgtactccagcattttggaac

Function

NR:

description
ankyrin repeat domain-containing protein 33B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021611269.2 True 2450 mRNA 0.50 4 65730055 65735374

Neighbor

gene id symbol gene type direction distance location
LOC110530367 LOC106569226 coding upstream 10069 65703263 ~ 65719986 (+)
LOC110530365 LOC106569227 coding upstream 49673 65676827 ~ 65680382 (+)
LOC110530364 LOC106569228 coding upstream 59686 65659289 ~ 65670369 (+)
pi15b LOC106569289 coding upstream 72158 65654439 ~ 65657897 (+)
LOC110530360 tmm70 coding upstream 127914 65599331 ~ 65602141 (+)
trnaa-ugc-27 NA coding downstream 69671 65805045 ~ 65805115 (+)
LOC110529132 LOC106569221 coding downstream 168810 65904184 ~ 65907219 (+)
LOC110530371 NA coding downstream 182924 65918298 ~ 65920176 (+)
LOC110530370 LOC106569219 coding downstream 195661 65931035 ~ 66005474 (+)
LOC110530372 LOC106569218 coding downstream 275377 66010751 ~ 66027208 (+)
G735656 NA non-coding upstream 85004 65644826 ~ 65645051 (+)
G735619 NA non-coding upstream 129810 65575105 ~ 65600245 (+)
G735573 NA non-coding upstream 237906 65491852 ~ 65492149 (+)
G735570 NA non-coding upstream 242908 65486781 ~ 65487147 (+)
G735569 LOC105024267 non-coding upstream 244748 65485020 ~ 65485307 (+)
G735705 NA non-coding downstream 12402 65747776 ~ 65775479 (+)
G736463 NA non-coding downstream 159815 65895189 ~ 65895623 (+)
G736466 NA non-coding downstream 161429 65896803 ~ 65897040 (+)
G736477 NA non-coding downstream 174692 65910066 ~ 65911742 (+)
G735512 NA other upstream 326956 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 381558 65300995 ~ 65386540 (+)
G735064 NA other upstream 899152 64830624 ~ 64830903 (+)
si:ch211-106n13.3 LOC106569214 other downstream 388834 66100360 ~ 66125932 (+)
G737194 LOC106569203 other downstream 919288 66654662 ~ 66655753 (+)
kncn kncn other downstream 964312 66699211 ~ 66704200 (+)
G737234 gs02 other downstream 1063199 66798573 ~ 66802080 (+)
G737783 NA other downstream 1435093 67170467 ~ 67215629 (+)

Expression


Co-expression Network