mcm6l (LOC106569286)


Basic Information

Item Value
gene id mcm6l
gene name LOC106569286
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66035055 ~ 66040719 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613373.2
GGCACACCTGTGTGCATTGTTTCTACAACAGCTTGCAGGGGAGGTTGGCAAACGAAGCACCCTCTTCCATCAATAGAACTGTCATAATTTTTCAGGATGGAGTCTGCAGCCGAGACCAGCACTGCAGGAGTTTCAGTAAAAGATGACCTTTCAGAAAAATGTCAGAAGTTATTTCTTGAGTTCTTGGAGGAGTTTCAGGACACAAACGGGGAGATTTTGTATCAACCAGATGCTGAGGAGCTCATTCGAccagagagaaacacactgacTGTAAACTTCACCAACATTGAGCACTTCAATCAGCAACTAGCTACCACTATTCAGGAGGAGTATTACAGGGTATACCCATTCCTATGCAGAGCAGTGCGTTACTTTGCAAGAGATCATGGTAACATGCCAGTAGCCAAAGAGTTCTATGTGGCCTTCTCTGACTTTCCATCAAGACAAAAGATCCGAGAGCTCTCCACGGCCCGGATTGGGTCCCTACTGCGTATCAGTGGCCAGGTGGTGAGGACACACCCAGTGCACCCTGAGCTGGTCAGTGGTACCTTCCTGTGTCTGGAATGCCAGTCCGTTATGAAAGATGTTGAGCAGCAGTTTAAATACACCCTGCCCAACATTTGTAAGAACCCAGTCTGTGCCAATCGACGTCACTTCATGCTGGACCCCAACAAGTCCCGTTTTGTGGACTTTCAGAAGGTGCGTATCCAGGAGACCCAGGCGGAGCTGCCTCGTGGCTCCATCCCCCGCAGTGTGGAGGTGATCCTGAGGGCAGAGGCTGTGGAGATGGCTCAGGCAGGGGACCGTTGTGACTTCACCGGCACACTGATCGTCGTACCAGATGTTGCTGCCCTGGCTGTGTCAGGCACCAGGGCAGAGACCAGCAGCAGAGTGACTGGGGGGAGGCAGGGCTTTGATGCAGATGGGATCCAGGGACTGAAGGCTCTAGGTGTCAGGGATCTGTCCTACAGACTGGCCTTCCTAGCCTGCTACGTGGCCCCCACTAACCCTCAGTTTGGTGGTAAAGATCTACGACAGGAAGACCAGACTGCAGAGAGTGTGAAGAACCAGATGACTGTTCAGGAGTGGGAGAAAGTGTTTGAGATGAGTCAGGACAAGAACCTCTACCACAACCTCTGCACCAGCCTCTTCCCCACTATCCATGGGAATAATGAGATCAAGCGTGGAATCCTATTGATGCTCTTTGGCGGTGTTGGCAAGACGACCATGGAGGGCACATCTCTGAGGGGGGATATTAATGTTTGCATCGTTGGGGACCCCAGTACCTCCAAGAGCCAGTTCCTAAAACACGTGGAGGACTTTGCGCCCAGGGCAGTCTACACCAGTGGGAAAGCCAGCAGCGCGGCCGGGTTGACGGCAGCTGTAGTGAAAGATGAGGAGTCCCATGAGTTTGTCATCGAGGCTGGGGCCCTCATGTTGGCAGATAACGGAGTCTGTTGCATTGATGAGTTTGACAAGATGGACCTGAAAGACCAGGTAGCTATTCACGAGGCCATGGAACAGCAGACCATCTCCATCACTAAGGCTGGTGTGAAGGCCACTCTGAATGCTCGCACCTCCATCCTGGCGGCTGCTAACCCCATCGACGGGAGATACAACCGCTCTAAGTCTCTGAAACAGAACGTCAACATGTCAGCACCCATCATGTCCAGATTTGACCTCTTCTTCATTCTGATTGATGAGTGCAATGAGGTGACAGATTATGCCATAGCCAGGCGTATCGTAGACCTGCACTTTAGAAACATGGAGTCTGTGGAGCGAGTCTACGCCACTGAtgagatacagagatacatactgtTTGCTCGGCAGTTTAAACCAAAGATCACAGCAGAGGCAAAAGAGTTTGTGGTGGACCAGTACAAGCGCCTGCGTCAGCGGGACAGCAGCGGCAGCACCAAGTCAGCCTGGCGTATCACCGTCAGGCAGCTAGAGAGCATGCTCCGACTATCTGAGGGCATGGCCAGGCTCTACTGCTCAGATGAGGTGCATCCCAAACACGTTAAGGAGGCCTTCCGGCTATTGAATAAGTCTGTCATCCGCGTCGACTCCCCAGATATCAACTTCGACCAGGAACAAGACAATGGGGAAATGAATGATCATAGTGACATGATTGGCACTAATCGCAATCATGCAGAGGAGGCTATGGACACAGAGCATGGGGCAGGCAGACCTGAGAAGACCAGCACTGCCAAGCCTGCCCTCAAGATGACCTTTGCTGAGTACAAAAGGGTCTCCAACCTCATTGTTTTTCACATGCAGAAGATGGAAGATATTGATGAGTCCTCACTGAAGATGAGCGAGCTGATTAACTGGTACCTGAAAGAAATGGAGAGTGAGATAGAGTCAGAAGCTGAGCTGGTTGCCAAGAAGAATCTTATAGAGAAAGTGCTTCACAGACTAATCCATTATGACCACATTATCATAGAGTTAACGAAGACTGGGCTGAAGAAAGTTGGTGATGAGGGAGAGGAACCTGTCATCGAAGAGGACCCCTTCTTAGTGGTCAACCCCAATTACATCCTGGAAGATTAGGTAGGGTCCACCTCAGCCATAGATATTGTGGAAGTAATTGAACTCGGGCTTATCTGTAAGGAATTTGTGATTGCAGCTACAGTAGCCTACTGTCAACTTGTTTTGCTGGCATGTTGCTATTGACTATCAATGTACTGTCTCTaaaaaaaacactgaacactTGTCATACTGATCATGTCTATGCAtttcaataaatatatattttttgcagtg
>XM_036985998.1
GGCACACCTGTGTGCATTGTTTCTACAACAGCTTGCAGGGGAGGTTGGCAAACGAAGCACCCTCTTCCATCAATAGAACTGTCATAATTTTTCAGGATGGAGTCTGCAGCCGAGACCAGCACTGCAGGAGTTTCAGTAAAAGATGACCTTTCAGAAAAATGTCAGAAGTTATTTCTTGAGTTCTTGGAGGAGTTTCAGGACACAAACGGGGAGATTTTGTATCAACCAGATGCTGAGGAGCTCATTCGAccagagagaaacacactgacTGTAAACTTCACCAACATTGAGCACTTCAATCAGCAACTAGCTACCACTATTCAGGAGGAGTATTACAGGGTATACCCATTCCTATGCAGAGCAGTGCGTTACTTTGCAAGAGATCATGGTAACATGCCAGTAGCCAAAGAGTTCTATGTGGCCTTCTCTGACTTTCCATCAAGACAAAAGATCCGAGAGCTCTCCACGGCCCGGATTGGGTCCCTACTGCGTATCAGTGGCCAGGTGGTGAGGACACACCCAGTGCACCCTGAGCTGGTCAGTGGTACCTTCCTGTGTCTGGAATGCCAGTCCGTTATGAAAGATGTTGAGCAGCAGTTTAAATACACCCTGCCCAACATTTGTAAGAACCCAGTCTGTGCCAATCGACGTCACTTCATGCTGGACCCCAACAAGTCCCGTTTTGTGGACTTTCAGAAGGTGCGTATCCAGGAGACCCAGGCGGAGCTGCCTCGTGGCTCCATCCCCCGCAGTGTGGAGGTGATCCTGAGGGCAGAGGCTGTGGAGATGGCTCAGGCAGGGGACCGTTGTGACTTCACCGGCACACTGATCGTCGTACCAGATGTTGCTGCCCTGGCTGTGTCAGGCACCAGGGCAGAGACCAGCAGCAGAGTGACTGGGGGGAGGCAGGGCTTTGATGCAGATGGGATCCAGGGACTGAAGGCTCTAGGTGTCAGGGATCTGTCCTACAGACTGGCCTTCCTAGCCTGCTACGTGGCCCCCACTAACCCTCAGTTTGGTGGTAAAGATCTACGACAGGAAGACCAGACTGCAGAGAGTGTGAAGAACCAGATGACTGTTCAGGAGTGGGAGAAAGTGTTTGAGATGAGTCAGGACAAGAACCTCTACCACAACCTCTGCACCAGCCTCTTCCCCACTATCCATGGGAATAATGAGATCAAGCGTGGAATCCTATTGATGCTCTTTGGCGGTGTTGGCAAGACGACCATGGAGGGCACATCTCTGAGGGGGGATATTAATGTTTGCATCGTTGGGGACCCCAGTACCTCCAAGAGCCAGTTCCTAAAACACGTGGAGGACTTTGCGCCCAGGGCAGTCTACACCAGTGGGAAAGCCAGCAGCGCGGCCGGGTTGACGGCAGCTGTAGTGAAAGATGAGGAGTCCCATGAGTTTGTCATCGAGGCTGGGGCCCTCATGTTGGCAGATAACGGAGTCTGTTGCATTGATGAGTTTGACAAGATGGACCTGAAAGACCAGGTAGCTATTCACGAGGCCATGGAACAGCAGACCATCTCCATCACTAAGGCTGGTGTGAAGGCCACTCTGAATGCTCGCACCTCCATCCTGGCGGCTGCTAACCCCATCGACGGGAGATACAACCGCTCTAAGTCTCTGAAACAGAACGTCAACATGTCAGCACCCATCATGTCCAGATTTGACCTCTTCTTCATTCTGATTGATGAGTGCAATGAGGTGACAGATTATGCCATAGCCAGGCGTATCGTAGACCTGCACTTTAGAAACATGGAGTCTGTGGAGCGAGTCTACGCCACTGAtgagatacagagatacatactgtTTGCTCGGCAGTTTAAACCAAAGATCACAGCAGAGGCAAAAGAGTTTGTGGTGGACCAGTACAAGCGCCTGCGTCAGCGGGACAGCAGCGGCAGCACCAAGTCAGCCTGGCGTATCACCGTCAGGCAGCTAGAGAGCATGCTCCGACTATCTGAGGGCATGGCCAGGCTCTACTGCTCAGATGAGTTGACTTATTTAAAGGTGCATCCCAAACACGTTAAGGAGGCCTTCCGGCTATTGAATAAGTCTGTCATCCGCGTCGACTCCCCAGATATCAACTTCGACCAGGAACAAGACAATGGGGAAATGAATGATCATAGTGACATGATTGGCACTAATCGCAATCATGCAGAGGAGGCTATGGACACAGAGCATGGGGCAGGCAGACCTGAGAAGACCAGCACTGCCAAGCCTGCCCTCAAGATGACCTTTGCTGAGTACAAAAGGGTCTCCAACCTCATTGTTTTTCACATGCAGAAGATGGAAGATATTGATGAGTCCTCACTGAAGATGAGCGAGCTGATTAACTGGTACCTGAAAGAAATGGAGAGTGAGATAGAGTCAGAAGCTGAGCTGGTTGCCAAGAAGAATCTTATAGAGAAAGTGCTTCACAGACTAATCCATTATGACCACATTATCATAGAGTTAACGAAGACTGGGCTGAAGAAAGTTGGTGATGAGGGAGAGGAACCTGTCATCGAAGAGGACCCCTTCTTAGTGGTCAACCCCAATTACATCCTGGAAGATTAGGTAGGGTCCACCTCAGCCATAGATATTGTGGAAGTAATTGAACTCGGGCTTATCTGTAAGGAATTTGTGATTGCAGCTACAGTAGCCTACTGTCAACTTGTTTTGCTGGCATGTTGCTATTGACTATCAATGTACTGTCTCTaaaaaaaacactgaacactTGTCATACTGATCATGTCTATGCAtttcaataaatatatattttttgcagtg

Function

NR:

description
unnamed protein product

GO:

id name namespace
GO:0006270 DNA replication initiation biological_process
GO:0042555 MCM complex cellular_component
GO:0005634 nucleus cellular_component
GO:0005524 ATP binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003678 DNA helicase activity molecular_function

KEGG:

id description
K02542 MCM6; DNA replication licensing factor MCM6

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613373.2 False 2766 mRNA 0.50 17 66035055 66040719
XM_036985998.1 True 2781 mRNA 0.50 17 66035055 66040719

Neighbor

gene id symbol gene type direction distance location
LOC110530372 LOC106569218 coding upstream 7847 66010751 ~ 66027208 (+)
LOC110530370 LOC106569219 coding upstream 29581 65931035 ~ 66005474 (+)
LOC110530371 NA coding upstream 114879 65918298 ~ 65920176 (+)
LOC110529132 LOC106569221 coding upstream 127836 65904184 ~ 65907219 (+)
trnaa-ugc-27 NA coding upstream 229940 65805045 ~ 65805115 (+)
LOC110530377 LOC106569285 coding downstream 1515 66042234 ~ 66064749 (+)
exoc3 LOC106569216 coding downstream 25293 66066012 ~ 66072799 (+)
si:ch211-106n13.3 LOC106569214 coding downstream 59641 66100360 ~ 66125932 (+)
LOC110530382 ccr3 coding downstream 85294 66126013 ~ 66128501 (+)
LOC110530963 LOC106569213 coding downstream 90383 66131102 ~ 66199626 (+)
G736477 NA non-coding upstream 123313 65910066 ~ 65911742 (+)
G736466 NA non-coding upstream 138015 65896803 ~ 65897040 (+)
G736463 NA non-coding upstream 139432 65895189 ~ 65895623 (+)
G735705 NA non-coding upstream 259576 65747776 ~ 65775479 (+)
G736562 NA non-coding downstream 32606 66073325 ~ 66073533 (+)
G736572 NA non-coding downstream 56966 66097685 ~ 66097913 (+)
G736575 NA non-coding downstream 58748 66099467 ~ 66099675 (+)
G736578 NA non-coding downstream 66569 66107288 ~ 66107524 (+)
LOC110530364 LOC106569228 other upstream 366960 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 433158 65599331 ~ 65602141 (+)
G735512 NA other upstream 631956 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 686558 65300995 ~ 65386540 (+)
G735064 NA other upstream 1204152 64830624 ~ 64830903 (+)
G737194 LOC106569203 other downstream 613943 66654662 ~ 66655753 (+)
kncn kncn other downstream 658967 66699211 ~ 66704200 (+)
G737234 gs02 other downstream 757854 66798573 ~ 66802080 (+)
G737783 NA other downstream 1129748 67170467 ~ 67215629 (+)

Expression


Co-expression Network