exoc3 (LOC106569216)


Basic Information

Item Value
gene id exoc3
gene name LOC106569216
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66066012 ~ 66072799 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036985999.1
TGCCAAAAAATTGCACACAGAGGATCCTTTCGAGGGCGCTGCAGTCAGCTGGGCGGCGCTCGGGAACTGTCAACCAGGAAAAGCAGTTGATAGTGTTGGAATTAATATCATATTAATCGAACGACTTCTTACTTATTCAAACCGATTATTGGAGTTGACACAACTTGCCGTCGTTGTCATGGAGGAGACGAACAGGGAGGCGGTTGCTACGGCCGTGCAGAGAGTGGCAGGGATGCTGCAGCGCTCAGACCAGTTGGACAAAGTGGAGCAGTATCGCCGGCGAGAGGCCCGCAAGAAAGCTTCAGTAGAAGCCCGACTGAAGGCTGCCATCCAGTCCCAGTTGGATGGGGTCCGCACAGGTCTCAGTCAGCTCCACAATGCCCTTGGGGATGTAAAGGACATCCAGAACTCCCTGGCAGACGTTAGTAAGGACTGGAGGCAGAGTATCAACACTATTGAAAACCTCAAAGATGTAAAAGATGCCGTGGTCCAACACAGTCAGCTTGCCTCAGCCGTCGAGAACTTAAAGAATATCTTCTCAGTGCCTGAGATAGTCGCAGACACCCAGGTTCTGATTGAGCAGGCCGAGCTGCTAGAGGCCCACCGTAAACTCATGGATCTGGAGTGTTCGCGGGACGACCTCATGTACGAGCAGTACCGAATGGACAGCAAAAACACTCACGACATGAACCTGATCCGCAACTACTTTGGCGAGGTGCAGGGCCTATCTGACGATCTGGCCAAGCAGCTGTGGATGGTGCTGCAGCGCGCCATGGGCACGGTGCGCCGCGACCCCACCATGCTGGTCTCAGTGGTGCGCATCATTGAGCGTGAGGAGAAGATCGACCGGCGCATGCTGGACCGCAAGAAGCAGACCGGCTTTATCCCCCCGGGCCGGCCCAAGAGCTGGAAAGAGAAGATGTTTGAAGTGCTGGAAGGCACAGTCACCACACGCATCGAGGGCAGCCAGTCGGTGACACGTGAGGCAGACAAGATGTGGATGGTGAGGCTGCTAGAGATCACCAGGAAGTACGTACTGGACGACCTGATTGTGGTGAAGAACCTGATGGTGCAGTGCTTCCCACCACACTACAACACCTTTGACAGATTCTTTAAGCTCTACCACAACGCCGTGTCCATGCGGGTGCAGGAGCTGGCTGCAGAAGACCTGGAGGCCAATGAAATTGTGTCCCTCCTCACCTGGGTCCTCAACACATACAAAAGTGAGGAGATGATGGGTCACCCAGAGCTGCTGACAGAGTATGACATCAACCTGATGGATCCTCTGCTGCCTCAGGAGGTGGTGGATGAGCTGCTCAGCAAATACCTGCAGACCTTCACTTCCAACATCACTGGCTGGCTGCGCAAGGCTCTGGAGACAGACAAGAAGGACTGGTTTAAAGAGACAGAACCAGAGGCGGATCAGGACGGGTACTACCAGACCACCCTCCCTGCCATCGTCTTCCAGATGTTTGAGCAGAATCTCCAGGTGGCAGCCCAGATCAATGAGACGTTTAAAGAGCAGGTCCTGAAGCTCTGTTTAAAACAGATGAATTCATTTCTCGTCAGgTACAGGGAAGAGGCGATTGCCTACAAGGAGGACCACTTGAGAGACCGGCAGCTCCCTCAGTGCTACGTCCAATACATGATCGCCATTATAAACAACTGTCATACATTCAAGGAGTCTATTAACAGTCTAAAGAAGAAATACTTTAAATCTACGGAGCCCACCCAGAATGACGCTGCCATAGAGAAGACCCTGAACGACGTGGCCAAAGACGGCTGCCAGTTTCTATTGGATGAAGTCTTCCTAGATTTGGAGCATCATCTCAATGAGTTGCTGACCAGGAAGTGGTTGACGGGGACCCATGCAGTGGACACGATCTGTGTGACAGTCGAAGATTACTTCAACGATTTCGCCAAGATCAAGAAGCCTTTCAATACGGAGATGACCAGCGAGGCCCATCGCAGGGTGGTGGTGGAGTATATCAAGGCTGTGATGCAGAAACGGATCACGTTCAAGAACgcagatgagaggagggagggagcagacagGATGATTAAGGAGGCTGAGCAGTTCAAGTTCCTCTTCAGGAAACTCACTGCTGGTGAGGAGACTGACCGGCTGTGTGATGCCATCGCTGCTATAGCCGAGGTGTTCAAACTCACAGACCCCACCCTGCTCTACCTGGAGGTCTCCACGCTGGTGTCCAAATACCCTGACATCAGGGAGGAGCACATCGTGGCCTTACTGGCGATGAGAGGGGATGCCAGCCGAGATATGAAGCAGATGATCATGGAGACACTGAACCAGAATAAGCCTACCTACGCAGGGATCACCCAGCCCATCTTCAAGGACATCACCGTCCCCACCGTGACCATGACCTCCATGTCCTCCTCTATGGCCGCCACTGCCAACAAACTGCTGAAATAAATAACCAGTCTGGAGAGATAcacctgggtcgtattcattCATGCACAACGTAGCAagatgttttgcaacagaaaactaAAACAAGCATTCCTTGTTGGACAAGTTTggatagtccctccctgtttgttgttttttgtttggtGCCTAGAGATTACGACCCTGGCTCACAAGGCACGAAGAAAAGAGACTGCAGAAAATCACAGAATACAGATTTGTCACTTTTTGCACTTGTGAATCCGATTCCACTGACATCCAATGAAAGGCTTGGACTGTAGTCCTTAAGGATCTGTAAGGATATGATACTTGATGAAACAACCGTTGAACACTAACAAGCGATTTTGTTACTGAAATGGGACTCACCACCCACCCCTCCATGTACAATGAACAGAAATTGTTCCAGTAAGAAACTTTGTCAGTGCGTGATGCTGAATGTCTGTTAGAACATCTATTAAATAAATCCTTTCCCCTGTCA

Function

NR:

description
exocyst complex component 3-like

GO:

id name namespace
GO:0006887 exocytosis biological_process
GO:0000145 exocyst cellular_component

KEGG:

id description
K06110 EXOC3, SEC6; exocyst complex component 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036985999.1 True 2906 mRNA 0.51 13 66066012 66072799

Neighbor

gene id symbol gene type direction distance location
LOC110530377 LOC106569285 coding upstream 1263 66042234 ~ 66064749 (+)
mcm6l LOC106569286 coding upstream 25293 66035055 ~ 66040719 (+)
LOC110530372 LOC106569218 coding upstream 38804 66010751 ~ 66027208 (+)
LOC110530370 LOC106569219 coding upstream 60538 65931035 ~ 66005474 (+)
LOC110530371 NA coding upstream 145836 65918298 ~ 65920176 (+)
si:ch211-106n13.3 LOC106569214 coding downstream 27561 66100360 ~ 66125932 (+)
LOC110530382 ccr3 coding downstream 53214 66126013 ~ 66128501 (+)
LOC110530963 LOC106569213 coding downstream 58303 66131102 ~ 66199626 (+)
LOC110530386 NA coding downstream 66935 66139734 ~ 66141456 (+)
blvra blvra coding downstream 137204 66210003 ~ 66218844 (+)
G736477 NA non-coding upstream 154270 65910066 ~ 65911742 (+)
G736466 NA non-coding upstream 168972 65896803 ~ 65897040 (+)
G736463 NA non-coding upstream 170389 65895189 ~ 65895623 (+)
G736562 NA non-coding downstream 526 66073325 ~ 66073533 (+)
G736572 NA non-coding downstream 24886 66097685 ~ 66097913 (+)
G736575 NA non-coding downstream 26668 66099467 ~ 66099675 (+)
G736578 NA non-coding downstream 34489 66107288 ~ 66107524 (+)
G736606 NA non-coding downstream 88439 66161238 ~ 66161448 (+)
LOC110530364 LOC106569228 other upstream 397917 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 464115 65599331 ~ 65602141 (+)
G735512 NA other upstream 662913 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 717515 65300995 ~ 65386540 (+)
G735064 NA other upstream 1235109 64830624 ~ 64830903 (+)
G737194 LOC106569203 other downstream 581863 66654662 ~ 66655753 (+)
kncn kncn other downstream 626887 66699211 ~ 66704200 (+)
G737234 gs02 other downstream 725774 66798573 ~ 66802080 (+)
G737783 NA other downstream 1097668 67170467 ~ 67215629 (+)

Expression


Co-expression Network