blvra (blvra)


Basic Information

Item Value
gene id blvra
gene name blvra
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66210003 ~ 66218844 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613381.2
CGTTCTATGTACACGTCACACGCAAGCTGTcttgaaaaaaaaatgtgttatgaAAGTTGTTACACAGTTATATCACAGCGACAAGAGCTCGACAGTAGCAGTTTATTCACATAAGCGAGTCATCTGCGTCAATTTACTGTCGTCGAGGGCAATACAGAAAGTAGACATGTTTGGTTCAGTAGTGGTGGGCATCGGGACAGCAGGCTTTGTGAGGATCAGGGACATGCTAGCCCCTCTGCCTTCCAGTGCAGCTGAGAAGCTCAGTGTCAAAGGCTTCATTTCCAGGAGGACCCTAGAGGAGCAGCAGGGAGTGAAACAGATCACTATCGAGGATGCCCTGAGGAGAGATGACATAAAGGTGGCCTTCGTCTGCACTGAAAACGCTGTGCATGAGGAAAACATCAGGACATTTCTGGAAGCTGGGAAGCATGTCTGTGTGGAATATCCTATGGCCATGACATACAAGACTGCCGTGGACCTCTGGGACCTGGCTCAGGAAAAAGGAGTGGTCCTGCATGAGGAGCACATAGAACTCTTGACAGCCGACTTTAAGCAGCTGAAGAAGGACATAGCAGGGAAAAAGCTGGAGGAAGGATCCCTTCACTTCACAgGAGGTCCTCTGAAGCCGGGCTTTGGGTTTCCAGCTTTCAGTGGCATCGCCCGGCTTACCTGGCTGGTGGATCTGTTTGGAGAGCTGTCTGTCACCACTGCCAGCATGGAGGAAGACCAGGAGAACAAGTACATGAAGATGACCACTCAACTCATGACTAAAGAGCAGAAGCCTCTCACATGGATTGAGGAGCGGGGTCCTGGCCTGCCCAGAGTGAAGAATATCAACTTCCGCTTTGACTCATGCACCATGACCCAGCTTCCCCCGGCTGCCAGGGAGCCGGTGGGTCTCTTCATGCAGGACCTGGTGCTCTTCAGTCAGAAGCTTCTGGGCCAGGTCCCCCGTGACCAGCTCCATGCCGAGCGCCACAGGGTCCTCCACTGTCTGGAGCTGGCCGACCGCATCCAGCAGCTGAGCCAGCAAGGCCAGGGATCAGCCCAGGACGCCTAGAGACACAGTGGGGTCCCAGCCTACCGGGGGGCCCCAGCAAAGTTACAGTAACTTttccaaaattcccaggttttctagaaattatgttttttttcttctcagccTACTGGTAGATGTCCAAGCGCACAAGATCCGGCCATAAATAAGCCTTCTACAGTACAGCTACTGTAACCTGCTGTACTACTGACAGACGCACTCGCAACGTCTTTGCAATGTTAAGGGATTTTATTCATAAATGAGGGAAAGGAGACGTGCAATGCCTTTCAGAAACAGATAGGTCTCTAAGGCATGTCAGCTTATTATATTAGGGTTAGGCTGTTACTCACAACAGACCTCCGATGTACTACATCTTCACATTGATGAAAGGTCCATTAATAGTTTGATGTTTGCATTGTGTTACTTATTCAAGTTAATCTACATTACATGTACTATAACATTCTGGTAGTTGAACACAGCTCATGATGCTTTAGCATTAGCTGGTGGTGCTTTTATATGTTCATTACTTATTTATCTCATGACATTTATTGACTTATGTCGTTTAGCTACGTGCACTCAGAAGTGGAAAGCAAAACAGTGTCATACTGATCCTTGCATGTTCAAATCATTCACTCTCTACAATAGGTGTTTGCCTGATACCCCAGCTAAATATTGCACGGATGAATATTTAGATAGCTCTGGGAGGTGAAAGTGTGTTATTTACACTGCAACTTCAGTTGTCAAAATGTTGTTAGACTGCAATTGGCACATCTGTTTTAAAGTATTATTTGATTCATGTTCATTCCTTGGAGAGGGAGTGTATTGTCATGTGTTGACAAATTGACAGTGTTGCTTTATTCTATTTATTCAACCATAAAGCGCCATTTTCATTTACAAAGACGTGACGCCACGGCTGAAAACACTTCCCTGGTGTTAGCACTAAATAAATCACTCTTGTGATTGTTCTTGCAACACGCTTcccttctccttttctctctttttcaaaACTACTTCTGCATGGCTGATGGTGATGAAACTTAAAAGAGGTTGCAATTCGATGGTAGAATAAGTCCTCCTGTTCTTTGTCTCCCCAGTGACTATCCCTCTGAATGGGGCCACAACAGAAACCAGTATTTCAATGGTCTCCAAATTAGTGTTGTATTTAATTCCGGGATGCTGACAGACTGAATTGGTGCCTTATTGGCCTGCTCAGTTCTCTCCATTGTTAACATCCATGTCAGTCCCATCTATTGATATCTATCGTCGCATCCCGTGTCACACAAGTACACACTACCCAGTGTGGTTTGGACACTTAACTGGGTGTCACTGTAGTGTTATTAGCAATTTATAGGGAGAGGAAATGACATTTCTTTATCAGTTGAGGAGGGAGAATTGTGCTGTTATATTGGATTATAATGCCTGAATGTTTACATGTTTTGAGTGTATTGTAACGGTATAGTTTGCTATAAGATTCATAATTTGCTGGTATCCATATTAATAAAGTGTGCCTGATTGATCATC
>XM_021613382.2
ATGTACACGTCACACGCAAGCTGTcttgaaaaaaaaatgtgttatgaAAGTTGTTACACAGTTATATCACAGCGACAAGAGCTCGACAGTAGCAGTTTATTCACATAAGCGAGTCATCTGCGTCAATTTACTGTCGTCGAGGGCAATACAGAAAACATGTTTGGTTCAGTAGTGGTGGGCATCGGGACAGCAGGCTTTGTGAGGATCAGGGACATGCTAGCCCCTCTGCCTTCCAGTGCAGCTGAGAAGCTCAGTGTCAAAGGCTTCATTTCCAGGAGGACCCTAGAGGAGCAGCAGGGAGTGAAACAGATCACTATCGAGGATGCCCTGAGGAGAGATGACATAAAGGTGGCCTTCGTCTGCACTGAAAACGCTGTGCATGAGGAAAACATCAGGACATTTCTGGAAGCTGGGAAGCATGTCTGTGTGGAATATCCTATGGCCATGACATACAAGACTGCCGTGGACCTCTGGGACCTGGCTCAGGAAAAAGGAGTGGTCCTGCATGAGGAGCACATAGAACTCTTGACAGCCGACTTTAAGCAGCTGAAGAAGGACATAGCAGGGAAAAAGCTGGAGGAAGGATCCCTTCACTTCACAgGAGGTCCTCTGAAGCCGGGCTTTGGGTTTCCAGCTTTCAGTGGCATCGCCCGGCTTACCTGGCTGGTGGATCTGTTTGGAGAGCTGTCTGTCACCACTGCCAGCATGGAGGAAGACCAGGAGAACAAGTACATGAAGATGACCACTCAACTCATGACTAAAGAGCAGAAGCCTCTCACATGGATTGAGGAGCGGGGTCCTGGCCTGCCCAGAGTGAAGAATATCAACTTCCGCTTTGACTCATGCACCATGACCCAGCTTCCCCCGGCTGCCAGGGAGCCGGTGGGTCTCTTCATGCAGGACCTGGTGCTCTTCAGTCAGAAGCTTCTGGGCCAGGTCCCCCGTGACCAGCTCCATGCCGAGCGCCACAGGGTCCTCCACTGTCTGGAGCTGGCCGACCGCATCCAGCAGCTGAGCCAGCAAGGCCAGGGATCAGCCCAGGACGCCTAGAGACACAGTGGGGTCCCAGCCTACCGGGGGGCCCCAGCAAAGTTACAGTAACTTttccaaaattcccaggttttctagaaattatgttttttttcttctcagccTACTGGTAGATGTCCAAGCGCACAAGATCCGGCCATAAATAAGCCTTCTACAGTACAGCTACTGTAACCTGCTGTACTACTGACAGACGCACTCGCAACGTCTTTGCAATGTTAAGGGATTTTATTCATAAATGAGGGAAAGGAGACGTGCAATGCCTTTCAGAAACAGATAGGTCTCTAAGGCATGTCAGCTTATTATATTAGGGTTAGGCTGTTACTCACAACAGACCTCCGATGTACTACATCTTCACATTGATGAAAGGTCCATTAATAGTTTGATGTTTGCATTGTGTTACTTATTCAAGTTAATCTACATTACATGTACTATAACATTCTGGTAGTTGAACACAGCTCATGATGCTTTAGCATTAGCTGGTGGTGCTTTTATATGTTCATTACTTATTTATCTCATGACATTTATTGACTTATGTCGTTTAGCTACGTGCACTCAGAAGTGGAAAGCAAAACAGTGTCATACTGATCCTTGCATGTTCAAATCATTCACTCTCTACAATAGGTGTTTGCCTGATACCCCAGCTAAATATTGCACGGATGAATATTTAGATAGCTCTGGGAGGTGAAAGTGTGTTATTTACACTGCAACTTCAGTTGTCAAAATGTTGTTAGACTGCAATTGGCACATCTGTTTTAAAGTATTATTTGATTCATGTTCATTCCTTGGAGAGGGAGTGTATTGTCATGTGTTGACAAATTGACAGTGTTGCTTTATTCTATTTATTCAACCATAAAGCGCCATTTTCATTTACAAAGACGTGACGCCACGGCTGAAAACACTTCCCTGGTGTTAGCACTAAATAAATCACTCTTGTGATTGTTCTTGCAACACGCTTcccttctccttttctctctttttcaaaACTACTTCTGCATGGCTGATGGTGATGAAACTTAAAAGAGGTTGCAATTCGATGGTAGAATAAGTCCTCCTGTTCTTTGTCTCCCCAGTGACTATCCCTCTGAATGGGGCCACAACAGAAACCAGTATTTCAATGGTCTCCAAATTAGTGTTGTATTTAATTCCGGGATGCTGACAGACTGAATTGGTGCCTTATTGGCCTGCTCAGTTCTCTCCATTGTTAACATCCATGTCAGTCCCATCTATTGATATCTATCGTCGCATCCCGTGTCACACAAGTACACACTACCCAGTGTGGTTTGGACACTTAACTGGGTGTCACTGTAGTGTTATTAGCAATTTATAGGGAGAGGAAATGACATTTCTTTATCAGTTGAGGAGGGAGAATTGTGCTGTTATATTGGATTATAATGCCTGAATGTTTACATGTTTTGAGTGTATTGTAACGGTATAGTTTGCTATAAGATTCATAATTTGCTGGTATCCATATTAATAAAGTGTGCCTGATTGATCATC

Function

symbol description
blvra Predicted to enable biliberdin reductase NAD+ activity; biliverdin reductase (NADP+) activity; and zinc ion binding activity. Predicted to act upstream of or within heme catabolic process. Predicted to be located in cytoplasm. Is expressed in brain; gill; hematopoietic system; and liver. Orthologous to human BLVRA (biliverdin reductase A).

NR:

description
biliverdin reductase A isoform X1

GO:

id name namespace
GO:0042167 heme catabolic process biological_process
GO:0055114 oxidation-reduction process biological_process
GO:0005737 cytoplasm cellular_component
GO:0008270 zinc ion binding molecular_function
GO:0004074 biliverdin reductase (NAD(P)+) activity molecular_function

KEGG:

id description
K00214 BLVRA, bvdR; biliverdin reductase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613381.2 False 2557 mRNA 0.45 7 66210003 66218844
XM_021613382.2 True 2547 mRNA 0.45 7 66210009 66218844

Neighbor

gene id symbol gene type direction distance location
LOC110530963 LOC106569213 coding upstream 10377 66131102 ~ 66199626 (+)
LOC110530386 NA coding upstream 68547 66139734 ~ 66141456 (+)
LOC110530382 ccr3 coding upstream 81502 66126013 ~ 66128501 (+)
si:ch211-106n13.3 LOC106569214 coding upstream 84071 66100360 ~ 66125932 (+)
exoc3 LOC106569216 coding upstream 137204 66066012 ~ 66072799 (+)
LOC110530387 LOC106569210 coding downstream 5138 66223982 ~ 66260619 (+)
LOC110530392 LOC106569206 coding downstream 218537 66437381 ~ 66509379 (+)
LOC110530393 LOC106569204 coding downstream 291581 66510425 ~ 66596240 (+)
LOC118965632 NA coding downstream 429790 66648634 ~ 66649552 (+)
LOC110530967 NA coding downstream 452259 66671103 ~ 66672607 (+)
G736608 NA non-coding upstream 43435 66166287 ~ 66166568 (+)
G736606 NA non-coding upstream 48555 66161238 ~ 66161448 (+)
G736578 NA non-coding upstream 102479 66107288 ~ 66107524 (+)
G736575 NA non-coding upstream 110328 66099467 ~ 66099675 (+)
G736572 NA non-coding upstream 112090 66097685 ~ 66097913 (+)
G736625 NA non-coding downstream 521 66219365 ~ 66219569 (+)
G736627 NA non-coding downstream 2391 66221235 ~ 66221687 (+)
G736659 NA non-coding downstream 50634 66269478 ~ 66274708 (+)
G736662 NA non-coding downstream 58040 66276884 ~ 66277084 (+)
G736663 NA non-coding downstream 59007 66277851 ~ 66278074 (+)
LOC110530364 LOC106569228 other upstream 541908 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 608106 65599331 ~ 65602141 (+)
G735512 NA other upstream 806904 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 861506 65300995 ~ 65386540 (+)
G737194 LOC106569203 other downstream 435818 66654662 ~ 66655753 (+)
kncn kncn other downstream 480842 66699211 ~ 66704200 (+)
G737234 gs02 other downstream 579729 66798573 ~ 66802080 (+)
G737783 NA other downstream 951623 67170467 ~ 67215629 (+)
G738020 NA other downstream 1012338 67231182 ~ 67231913 (+)

Expression


Co-expression Network