LOC110530387 (LOC106569210)


Basic Information

Item Value
gene id LOC110530387
gene name LOC106569210
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 66223982 ~ 66260619 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613387.2
TTAAAAAAAATTGTTCTGAATGAATGGTCTGTCAGCGCTTTCAAGCAGTGCTTCTGCGTCTTGAGTGCAGTGTTCCTAGGGATACTGTAGGGGCGTGTCGTGTGGATCATGATCATCTTTACGCGAATGTGTGCAGAGGGAAAACACGTAcgtttgtaaaaaataatatgtACAATACGATTTGATGCTAAAGCTAATTGCCAGTGACGAACTCAACTGTGAAGAACAGATCAGCTCCGATTGTTTGACTGTTTGAAGCTGCACCAACCAATGGCACCGATTGACAGCGCGAAATAAACATAGAACAGTCGTGGCCCGTGGCTCGCCAAACTGCAAACGCACTATGCGACGAGATGGACAAAGAATGATTTCTATGTCTGATGAATTTTGGATTATCACGGTGTTTAGGTGAACAAGGCTACTGTCCGGTGTTGACATCTCGTGAATTATGGCAGTTCTGTGTGGAATCATATTTCTGTTTTGGTTAGTGGATGAGATGCCGGTCGTATGAGGACTGTTGTGGGACGCGGTGCTGTGTCCGAGCTCTCTCCATCCAGAGACTATGGTACTTCTGGCTCCTGCTGATGATGGGCGTATTGTTCTGCTGTGGGGCAGGGTTTTTCATCCGCAGACGCATGAACCCCTCCCCACTTCCTGAGGACACCTTCAATGTGTCATTCACCAGACACCCAATGACAGCTTCAGGACTGCAGCAGCCCGGCATGCAAAACTATGGAGCCTCAGGAGGGATGATACTCACACCTACATACCCCATACAAGCCCATCCCCACCCAGTCCACCCCTCCCACATGGCAGCACCCTACCCACACCCTCCCCCTCCCGCCTACTGcaacctccctcctccaccctacGAACAGGTGCTGCAGACCTCGGAAAAGAGGTAACCAGGAGGAAAAAGACATTGGAATTAATTAAATGATTTCAAACCCTTTAGAGTTCTCAACCCTGCCACAACTGAGTGCAGAGATGGGTCACTGGCCCACGTTCGAGTAGAAAGCGAGTCTGGTATGGTAATGGAATAGCATCTCGGTGGTTAAAACGTCCATGCTCATTAAGggctggtttcctggacacagaatAACCCtgatcctggactaaaaagcatgcatTGAAACATGTATTATAATAGCTTTTTAGTCCGGGACTAAGCT
>XM_021613386.2
AATTGTTCTGAATGAATGGTCTGTCAGCGCTTTCAAGCAGTGCTTCTGCGTCTTGAGTGCAGTGTTCCTAGGGATACTGTAGGGGCGTGTCGTGTGGATCATGATCATCTTTACGCGAATGTGTGCAGAGGGAAAACACGTAcgtttgtaaaaaataatatgtACAATACGATTTGATGCTAAAGCTAATTGCCAGTGACGAACTCAACTGTGAAGAACAGATCAGCTCCGATTGTTTGACTGTTTGAAGCTGCACCAACCAATGGCACCGATTGACAGCGCGAAATAAACATAGAACAGTCGTGGCCCGTGGCTCGCCAAACTGCAAACGCACTATGCGACGAGATGGACAAAGAATGATTTCTATGTCTGATGAATTTTGGATTATCACGGTGTTTAGGTGAACAAGGCTACTGTCCGGTGTTGACATCTCGTGAATTATGGCAGTTCTGTGTGGAATCATATTTCTGTTTTGGTTAGTGGATGAGTGCACAGCTTCCAAGAAGTACTGCTGGTATTTTGAAGGAGGCTACCCAATCTATTTCATATGCCGGTCGTATGAGGACTGTTGTGGGACGCGGTGCTGTGTCCGAGCTCTCTCCATCCAGAGACTATGGTACTTCTGGCTCCTGCTGATGATGGGCGTATTGTTCTGCTGTGGGGCAGGGTTTTTCATCCGCAGACGCATGAACCCCTCCCCACTTCCTGAGGACACCTTCAATGTGTCATTCACCAGACACCCAATGACAGCTTCAGGACTGCAGCAGCCCGGCATGCAAAACTATGGAGCCTCAGGAGGGATGATACTCACACCTACATACCCCATACAAGCCCATCCCCACCCAGTCCACCCCTCCCACATGGCAGCACCCTACCCACACCCTCCCCCTCCCGCCTACTGcaacctccctcctccaccctacGAACAGGTGCTGCAGACCTCGGAAAAGAGGTAACCAGGAGGAAAAAGACATTGGAATTAATTAAATGATTTCAAACCCTTTAGAGTTCTCAACCCTGCCACAACTGAGTGCAGAGATGGGTCACTGGCCCACGTTCGAGTAGAAAGCGAGTCTGGTATGGTAATGGAATAGCATCTCGGTGGTTAAAACGTCCATGCTCATTAAGggctggtttcctggacacagaatAACCCtgatcctggactaaaaagcatgcatTGAAACATGTATTATAATAGCTTTTTAGTCCGGGACTAAGCTTAGTCTGTGTCTGAGAGCAGCCTCAGTTTGAATCACAATGGGTTTGTCTCAGTGTTTGTTTTCATGTCACCTCTAAGATGTCGACCAGAGGTGAGACCCAATGGTATAAAACAGACATGGATCCAAACAGTTTGTCTATTAACAactagcctgcctgcctgcatggtGCTCTGTCAACAACACTGTGTCAGCTGGAAGAGCAGCATCTATCTGAGCATAACTCAGATCACCCACTCAGGATACTGTATTATTGCCCACTATATGTTATGTTTTTAATATCACTGCTGTCAGAGCATTTAGTATCTCTAGTACAGATCAGTAGATTAGATCAGTAGCATTTAGTATCTCTAGTACAGATCAGCAGCCTAGTACAGATCAGTAGATTAGATCAGATTAGTAGCCTATAATACTGTGGACATACTGTAGAAATACCAACTCTGTTTCCCTTTGTGTCCCTCAAAATTAATTTTGTGTATGTCTTCCAGTGGAGGCTGCGGAGGGGAAAAcggaaatggaatggcatcaaacacatggaaaccatgtttgatgtatttgataccattccactgattccactcaagtcattaccacgagcccgttctctcCAAttgaggtgccaccaacctcctgtgatgtctTCTATATTTTATTAAAGTAGTGTTGCCAATAATCTATGCAATTTGCTAATGAATTCAGATGTAGATTGTGGTTGTTGTTTCTCACAATGTTTTCACGGTATCCTGAATTAGCATAGTACACAGTTAACATGTATCACCAGCTTGCCTAATAAAGTTTGGCTCTGGGGTAAGTGA

Function

NR:

description
vesicular, overexpressed in cancer, prosurvival protein 1-like isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613387.2 False 1172 mRNA 0.48 4 66223982 66259807
XM_021613386.2 True 2035 mRNA 0.45 5 66223990 66260619
Loading

Neighbor

gene id symbol gene type direction distance location
blvra blvra coding upstream 5138 66210003 ~ 66218844 (+)
LOC110530963 LOC106569213 coding upstream 24356 66131102 ~ 66199626 (+)
LOC110530386 NA coding upstream 82526 66139734 ~ 66141456 (+)
LOC110530382 ccr3 coding upstream 95481 66126013 ~ 66128501 (+)
si:ch211-106n13.3 LOC106569214 coding upstream 98050 66100360 ~ 66125932 (+)
LOC110530392 LOC106569206 coding downstream 176762 66437381 ~ 66509379 (+)
LOC110530393 LOC106569204 coding downstream 249806 66510425 ~ 66596240 (+)
LOC118965632 NA coding downstream 388015 66648634 ~ 66649552 (+)
LOC110530967 NA coding downstream 410484 66671103 ~ 66672607 (+)
kncn kncn coding downstream 438592 66699211 ~ 66704200 (+)
G736627 NA non-coding upstream 2295 66221235 ~ 66221687 (+)
G736625 NA non-coding upstream 4413 66219365 ~ 66219569 (+)
G736608 NA non-coding upstream 57414 66166287 ~ 66166568 (+)
G736606 NA non-coding upstream 62534 66161238 ~ 66161448 (+)
G736578 NA non-coding upstream 116458 66107288 ~ 66107524 (+)
G736659 NA non-coding downstream 8859 66269478 ~ 66274708 (+)
G736662 NA non-coding downstream 16265 66276884 ~ 66277084 (+)
G736663 NA non-coding downstream 17232 66277851 ~ 66278074 (+)
G736664 NA non-coding downstream 19139 66279758 ~ 66280027 (+)
G736665 NA non-coding downstream 20111 66280730 ~ 66281046 (+)
LOC110530364 LOC106569228 other upstream 555887 65659289 ~ 65670369 (+)
LOC110530360 tmm70 other upstream 622085 65599331 ~ 65602141 (+)
G735512 NA other upstream 820883 65402223 ~ 65403099 (+)
si:ch211-207d6.2 kiaa1217 other upstream 875485 65300995 ~ 65386540 (+)
G737194 LOC106569203 other downstream 394043 66654662 ~ 66655753 (+)
G737234 gs02 other downstream 537954 66798573 ~ 66802080 (+)
G737783 NA other downstream 909848 67170467 ~ 67215629 (+)
G738020 NA other downstream 970563 67231182 ~ 67231913 (+)

Expression

LOC110530387(LOC106569210) Expression in all Baseline Samples

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The chart has 1 Y axis displaying values. Range: 0 to 10.
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LOC110530387(LOC106569210) Expression in each Bioproject

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LOC110530387(LOC106569210) Expression in each Sample
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The chart has 1 Y axis displaying Expression. Range: 0 to 1000.
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Co-expression Network