LOC118965633


Basic Information

Item Value
gene id LOC118965633
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 68475403 ~ 68506363 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986881.1
GGAGTTAAACACAGTGACTTCTCTCAGCAGTAGCATAATATGGGTGACACCAGATATTGAAGGCAAACCCCTCAAAATGGAACTGGACACAGGATCTGCATTGTCTATAATttccactactgtctacattgAGCACTTCAAGGCTACCAAGCTGAAGAACACAAATGTGTTGCTGAAGACCTACTCAGGAGAGAGATTGAGCCCAATGCGGGCGTTGCAGGTCGGAGTGCGGTATGGGGGGCAAACACAGCAGTTACAGCTGTATGTGGTGCCTGGAACTGGCCCCCCATTATTTGGCAGGGAATGGCTTTCAAAAATAAAGCTGAACTGGTGTAACTTGAAAATGCTCCACACGTTCCAGTCCAAAGAGAAAAGCACATACCAAACACTGGAACACTTGCGGAAGAAATACAACACAGTTTTCAGTGATCAGATGGGAACAGTAAAAGGCTTCACAGCAAAACTTGTACTGAGAGATGACGCAACCCCGAAATTCTGCAAAGCCATATCTGTTCCATACTCCCTGAGACCAAAGGTGGAAGCGGAAATCGATCGCTTGCAGGATACAGGGATCCTGACGAAAGTGGACAGAAGCGAATGGGCCACACCCATAGTTCCTATTGTGAAGAAAGACGGGTCTGTTAGAATGTGTGGGGACTTCAACGTAACTGTGAATTCAATGTTGTATGTGGACCAGTACTCCCTGCCACGTCTGGATGACATCTTTGCTGCACTAGCTGGTGGGAAACACTTCAGTAAAATCGATCTGAAACAGGCTTACCTGCAGCTACCGGTTGAAGAGAGCTCCAAACAGTACctgacaataaacacacacaaaggtcTATACAGGTATAACCGCCTGGTTTTTGGTATTGCATCGGCCCCAGCCATTTGGCAACAAACTATTGACCAGATTTTACAAGGAATCCAAGGAACCCAGTGTATCCTGGATGACCTGATCATAACAGGACACATCGACAAAGAACACCTGGCTAACCTGGAAGAGGTCCTGAAAAGACTGAACGAGTGTGGTCTACAGGCAAACTTACAGAAGTGTGAGTTCTTCAAAGACAAGATTGTCTTCTGTGGACATGAAATCGACCGCAATGGATTGcacaaaacacaggacaaaatCGAGGCAGTGTTTATGCCCATTCCAAATGGCCAGAGGTGTTTTGCGTTCCTCCACCTCAGCTCAGACGATAGAGTGTCTCAGAACAACGTTTGCGCGCTTCGGATTGCCGCTGCAACTGaaagatggaggcTGTCGGGtctggagaccaaggctatgtACATTGAGGACTCCCTGGCTGCAGGGGGTATCCGTCCTTCTGCCTCCTCTGCCGGCTCAGGGTTCTTCTCTGTgaagaaggacaaaaccctgcaCCAGTGGAACAACTACTGGGGCCTGAATGAAATCATAGTTAAAAAATGTTACACGCTTCCACTCCTCACCCTTGCATTTGAGCCTCTCCAGGAGGCTACCATCTTCTCCAAATTGGACCTCCGGAAAACCTACCATCTATTACAGATATGGGATGGGGAGACCAACTGTAACATGTCTAGTGGGAAAGACAAATACCTGGTGATGCCATTCGAACTGACCaacgctcctgctgtgttccaggaCGTGGTTAACGACATTCTCTTTGACATGTTGAACCAGTTTGTGATCATCTACCTTGATGACATCCTTGTTTTCTCCCGCTTGGCTCAAGAACATGTCCTCTATGTCTGA

Function

NR:

description
uncharacterized protein K02A2.6-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986881.1 True 1738 mRNA 0.47 3 68475403 68506363

Neighbor

gene id symbol gene type direction distance location
LOC110530418 LOC106569175 coding upstream 276428 68185907 ~ 68198975 (+)
LOC110530413 NA coding upstream 550976 67904516 ~ 67924427 (+)
LOC110530969 LOC106569181 coding upstream 705917 67759384 ~ 67769486 (+)
LOC110530410 LOC106569184 coding upstream 748461 67693817 ~ 67726942 (+)
LOC110530407 LOC106569186 coding upstream 781761 67577845 ~ 67693642 (+)
LOC110530424 LOC106569169 coding downstream 367074 68873437 ~ 68898424 (+)
LOC110529135 NA coding downstream 498883 69005246 ~ 69006608 (+)
LOC110530427 LOC106569165 coding downstream 512837 69019200 ~ 69045596 (+)
LOC110530428 LOC106569166 coding downstream 540048 69046411 ~ 69116995 (+)
LOC110530431 igfbp-3b1 coding downstream 629208 69135571 ~ 69148676 (+)
G739266 NA non-coding upstream 201381 68273761 ~ 68274022 (+)
G739226 NA non-coding upstream 234612 68240482 ~ 68240791 (+)
G739225 NA non-coding upstream 235437 68239737 ~ 68239966 (+)
G739218 NA non-coding upstream 240232 68234950 ~ 68235171 (+)
G739215 NA non-coding upstream 242359 68232833 ~ 68233044 (+)
G739622 NA non-coding downstream 309756 68816119 ~ 68816346 (+)
G739624 NA non-coding downstream 311136 68817499 ~ 68817699 (+)
G739633 NA non-coding downstream 322425 68828788 ~ 68829043 (+)
G739634 NA non-coding downstream 322925 68829288 ~ 68829585 (+)
G739638 LOC106569170 non-coding downstream 338677 68845040 ~ 68856024 (+)
G738244 NA other upstream 927794 67546129 ~ 67547609 (+)
G738020 NA other upstream 1243490 67231182 ~ 67231913 (+)
G737783 NA other upstream 1259774 67170467 ~ 67215629 (+)
G737234 gs02 other upstream 1673323 66798573 ~ 66802080 (+)
G739648 NA other downstream 352020 68858383 ~ 68858753 (+)
G739670 NA other downstream 397002 68903365 ~ 68906965 (+)
G739708 NA other downstream 497974 69004337 ~ 69005116 (+)
G740827 ripk1 other downstream 1030037 69536400 ~ 69538276 (+)
G742095 NA other downstream 2119858 70626221 ~ 70626744 (+)

Expression


Co-expression Network