Item | Value |
---|---|
gene id | LOC110530428 |
gene name | LOC106569166 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 69046411 ~ 69116995 (+) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036986060.1 | False | 5337 | mRNA | 0.54 | 26 | 69046411 | 69116995 |
XM_036986059.1 | True | 5674 | mRNA | 0.54 | 26 | 69048709 | 69116995 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530427 | LOC106569165 | coding | upstream | 815 | 69019200 ~ 69045596 (+) |
LOC110529135 | NA | coding | upstream | 39803 | 69005246 ~ 69006608 (+) |
LOC110530424 | LOC106569169 | coding | upstream | 147987 | 68873437 ~ 68898424 (+) |
LOC118965633 | NA | coding | upstream | 540048 | 68475403 ~ 68506363 (+) |
LOC110530418 | LOC106569175 | coding | upstream | 847436 | 68185907 ~ 68198975 (+) |
LOC110530431 | igfbp-3b1 | coding | downstream | 18576 | 69135571 ~ 69148676 (+) |
LOC110530432 | LOC106569162 | coding | downstream | 146527 | 69263522 ~ 69354693 (+) |
LOC110530434 | LOC106569160 | coding | downstream | 238855 | 69355850 ~ 69434566 (+) |
opn7a | LOC106569157 | coding | downstream | 390660 | 69507655 ~ 69520370 (+) |
dusp22b | LOC106569155 | coding | downstream | 445991 | 69562986 ~ 69576816 (+) |
G739746 | NA | non-coding | upstream | 539 | 69045602 ~ 69045872 (+) |
G739710 | NA | non-coding | upstream | 42281 | 69003517 ~ 69004130 (+) |
G739736 | NA | non-coding | upstream | 45785 | 69000171 ~ 69000626 (+) |
G739735 | NA | non-coding | upstream | 47023 | 68999172 ~ 68999388 (+) |
G739638 | LOC106569170 | non-coding | upstream | 190387 | 68845040 ~ 68856024 (+) |
G739748 | NA | non-coding | downstream | 568 | 69117563 ~ 69119121 (+) |
G739802 | NA | non-coding | downstream | 28640 | 69145635 ~ 69147221 (+) |
G739821 | LOC106569164 | non-coding | downstream | 64518 | 69181513 ~ 69192634 (+) |
G739819 | NA | non-coding | downstream | 65121 | 69182116 ~ 69182446 (+) |
G739932 | NA | non-coding | downstream | 258129 | 69375124 ~ 69375357 (+) |
G739708 | NA | other | upstream | 41295 | 69004337 ~ 69005116 (+) |
G739670 | NA | other | upstream | 139446 | 68903365 ~ 68906965 (+) |
G739648 | NA | other | upstream | 187658 | 68858383 ~ 68858753 (+) |
LOC110530413 | NA | other | upstream | 1123789 | 67904516 ~ 67924427 (+) |
G738244 | NA | other | upstream | 1498802 | 67546129 ~ 67547609 (+) |
G740827 | ripk1 | other | downstream | 419405 | 69536400 ~ 69538276 (+) |
G742095 | NA | other | downstream | 1509226 | 70626221 ~ 70626744 (+) |
G742860 | NA | other | downstream | 2578607 | 71695602 ~ 71715616 (+) |
LOC110530976 | LOC106569323 | other | downstream | 3425731 | 72542055 ~ 72555556 (+) |
LOC110530502 | LOC106569321 | other | downstream | 3517889 | 72634238 ~ 72714065 (+) |