LOC110530431 (igfbp-3b1)


Basic Information

Item Value
gene id LOC110530431
gene name igfbp-3b1
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 69135571 ~ 69148676 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986061.1
TTGTCTAAAGTGCTTTCATGTGAATTAGGTACGCATCAACTGCAGAGTTAAATTTAGGACAATACGCACCACGACCTACCCCAAATCATTACAATGGAGACCTGTTATCGCACACTTTGGATGACAGTTGTTCTGGCATTGATTACGCGGAGATCAGCCGCGGTAGGGCCGGTTATCCGGTGTGAACCTTGTGATGCTGGAGCCCGGCTCCTCTGCAAGCCGTTGCCCAAGGACTGCACCGAGAGAGTTCGCGAAACTGGCTGCGGGTGCTGCATGACTTGCGCGCTGGCATTTGGACAGCCGTGCGGGGTGTACACCGGGAGATGTGGCTCCGGGATGGCATGCCAGCAGCAGCCCGGCGAGACGAAACCTCTCCAAGCTCTGCTGGAAGGACGAGGACAGTGTGCGATTGCAACCATTAAAAGATCCACCGCCGCTTTACCTGCCGTCAATGAGATACAAGAGAATGTGGGTGGTACTCAGGAGGAGGAGCAAAACACCACCGCCCCAGTGATCCAAGCCCCCCAAGCCCTTTTCAGCACCAGCAGACCTCCTGTAGGCCCCCCCAGACTCCCCCACcacacctctctcctccaccctgtcAAGGCAGTGGTCATCCACAGGGAGCAGCTGAAGAGGGCCCGGAGCTACAAAATGGAGGAACTCCCTGGAGCTCACAGCACAGACCAACAGAACTTCTCCCTGGAATCCAAGCAGGAGCCAGAGTATggtccctgtcttagagagatggagagtgtcCTCAAAGGACTGAAGATCACAGACATCCTCAACCCCAGAGGCTTCCACATCCCAAACTGTGACAATAAGGGCTTCTACAAAAAGAAACAGtgccgtCCATCCAAGGGCAGAAAGCGAGGGTTTTGCTGGTGTGTCGACAAGTATGGGCAGCCATTGCCAAGTTTCaacgggaaggagagaggagacaccCAGTGCTACAACTCTGAGAGCCAATAAGACCTGAGCAGCAAgaaggaaccagagagagagagagagaggcggagagaaagaaaagggagCCATGAACACACAGAAAAACTATGAGGATATTGGGATCCAAAAGGGTCCAAAATGGCTGGGCCTGGACGTGTTGGCTGGCATTGATGATACTTCGGCCAACAGGAAGGCAGGGCAGGAGGATGGAAGGCAGGGCAGGAGGAGTGGCTTGAGAAGAGGACTCATCCAATCACACTCCTTGTGTCCAACACACACTCTCCAATGCTATGTGCTGCTCCTGTAAGCAGTGTGTGGATGGATTCTCCATAGACAGAGGGCAGTACTTCTAAGGACAAATTAGATAATTAATTCCATTGCAGAGGCCTAGCCTTGATGATTACAGACTTGATGACAGAGACTTATATACAGTAATTCTGTATGTTtgatatgttactgtatgtatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg

Function

NR:

description
insulin-like growth factor-binding protein 3

GO:

id name namespace
GO:0001558 regulation of cell growth biological_process
GO:0005576 extracellular region cellular_component
GO:0005520 insulin-like growth factor binding molecular_function

KEGG:

id description
K10138 IGFBP3; insulin-like growth factor-binding protein 3

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986061.1 True 1460 mRNA 0.52 4 69135571 69148676

Neighbor

gene id symbol gene type direction distance location
LOC110530428 LOC106569166 coding upstream 18576 69046411 ~ 69116995 (+)
LOC110530427 LOC106569165 coding upstream 89975 69019200 ~ 69045596 (+)
LOC110529135 NA coding upstream 128963 69005246 ~ 69006608 (+)
LOC110530424 LOC106569169 coding upstream 237147 68873437 ~ 68898424 (+)
LOC118965633 NA coding upstream 629208 68475403 ~ 68506363 (+)
LOC110530432 LOC106569162 coding downstream 114846 69263522 ~ 69354693 (+)
LOC110530434 LOC106569160 coding downstream 207174 69355850 ~ 69434566 (+)
opn7a LOC106569157 coding downstream 358979 69507655 ~ 69520370 (+)
dusp22b LOC106569155 coding downstream 414310 69562986 ~ 69576816 (+)
LOC100499175 LOC106569154 coding downstream 430318 69578994 ~ 69591039 (+)
G739748 NA non-coding upstream 16450 69117563 ~ 69119121 (+)
G739746 NA non-coding upstream 89699 69045602 ~ 69045872 (+)
G739710 NA non-coding upstream 131441 69003517 ~ 69004130 (+)
G739736 NA non-coding upstream 134945 69000171 ~ 69000626 (+)
G739735 NA non-coding upstream 136183 68999172 ~ 68999388 (+)
G739821 LOC106569164 non-coding downstream 32837 69181513 ~ 69192634 (+)
G739819 NA non-coding downstream 33440 69182116 ~ 69182446 (+)
G739932 NA non-coding downstream 226448 69375124 ~ 69375357 (+)
G739933 NA non-coding downstream 226875 69375551 ~ 69375818 (+)
G739934 NA non-coding downstream 227256 69375932 ~ 69376131 (+)
G739708 NA other upstream 130455 69004337 ~ 69005116 (+)
G739670 NA other upstream 228606 68903365 ~ 68906965 (+)
G739648 NA other upstream 276818 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 1212949 67904516 ~ 67924427 (+)
G738244 NA other upstream 1587962 67546129 ~ 67547609 (+)
G740827 ripk1 other downstream 387724 69536400 ~ 69538276 (+)
G742095 NA other downstream 1477545 70626221 ~ 70626744 (+)
G742860 NA other downstream 2546926 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 3394050 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 3486208 72634238 ~ 72714065 (+)

Expression


Co-expression Network