Gene
RNA
| Item | Value |
|---|---|
| gene id | LOC110530440 |
| gene name | foxq1 |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 69692289 ~ 69693962 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| foxq1 | Enables sequence-specific double-stranded DNA binding activity. Involved in negative regulation of neuron apoptotic process. Predicted to be located in nucleus. Predicted to be part of chromatin. |
| description |
|---|
| forkhead box protein Q1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| XM_021613504.2 | True | 1674 | mRNA | 0.45 | 1 | 69692289 | 69693962 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC100499175 | LOC106569154 | coding | upstream | 101250 | 69578994 ~ 69591039 (+) |
| dusp22b | LOC106569155 | coding | upstream | 115473 | 69562986 ~ 69576816 (+) |
| opn7a | LOC106569157 | coding | upstream | 171919 | 69507655 ~ 69520370 (+) |
| LOC110530434 | LOC106569160 | coding | upstream | 257723 | 69355850 ~ 69434566 (+) |
| LOC110530432 | LOC106569162 | coding | upstream | 337596 | 69263522 ~ 69354693 (+) |
| foxf2a | foxf2 | coding | downstream | 5671 | 69699633 ~ 69703318 (+) |
| LOC110530442 | foxc1 | coding | downstream | 31365 | 69725327 ~ 69727474 (+) |
| wrnip1 | wrnip1 | coding | downstream | 409203 | 70103165 ~ 70127450 (+) |
| dhx30 | dhx30 | coding | downstream | 441493 | 70135455 ~ 70148930 (+) |
| LOC110530450 | LOC106569144 | coding | downstream | 478469 | 70172431 ~ 70186472 (+) |
| G740840 | NA | non-coding | upstream | 138258 | 69553785 ~ 69554031 (+) |
| G740839 | ripk1 | non-coding | upstream | 138618 | 69551452 ~ 69553671 (+) |
| G740790 | NA | non-coding | upstream | 186327 | 69505749 ~ 69505962 (+) |
| G740789 | NA | non-coding | upstream | 186746 | 69505257 ~ 69505543 (+) |
| G740783 | NA | non-coding | upstream | 189959 | 69502115 ~ 69502330 (+) |
| G741094 | NA | non-coding | downstream | 45161 | 69739123 ~ 69739334 (+) |
| G741104 | NA | non-coding | downstream | 51128 | 69745090 ~ 69745594 (+) |
| G741109 | NA | non-coding | downstream | 70121 | 69764083 ~ 69764429 (+) |
| G741118 | NA | non-coding | downstream | 81025 | 69774987 ~ 69775199 (+) |
| G741119 | NA | non-coding | downstream | 81320 | 69775282 ~ 69775497 (+) |
| G740827 | ripk1 | other | upstream | 154013 | 69536400 ~ 69538276 (+) |
| G739708 | NA | other | upstream | 687173 | 69004337 ~ 69005116 (+) |
| G739670 | NA | other | upstream | 785324 | 68903365 ~ 68906965 (+) |
| G739648 | NA | other | upstream | 833536 | 68858383 ~ 68858753 (+) |
| LOC110530413 | NA | other | upstream | 1769667 | 67904516 ~ 67924427 (+) |
| G742095 | NA | other | downstream | 932259 | 70626221 ~ 70626744 (+) |
| G742860 | NA | other | downstream | 2001640 | 71695602 ~ 71715616 (+) |
| LOC110530976 | LOC106569323 | other | downstream | 2848764 | 72542055 ~ 72555556 (+) |
| LOC110530502 | LOC106569321 | other | downstream | 2940922 | 72634238 ~ 72714065 (+) |
| LOC110530507 | LOC106569317 | other | downstream | 3166446 | 72779485 ~ 72872336 (+) |
