dhx30 (dhx30)


Basic Information

Item Value
gene id dhx30
gene name dhx30
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70135455 ~ 70148930 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613516.2
CGAAACAGCCGGCGTTTGTATTTCAAACATGGCGCTGCCCGGTTCAGTACTCGTGCGACTCAGAGCGTTGTGTAACCTTGGGAAATCTTTGGATACAGGGAACACAATTGGACACAATTACAATCGGGTCCGGTGGTACAAGACAAAAGCCAAGAGCAATCAGGACACTGCAGCGTCAGCGGGCCAGACAAGACGGGGTAGTGAGCTGCTGAAAGAGTTCCCTGAACCGAAGAGCCTGCTGTTTACCACCATATCCCGGTCGCTTGGGGTGTCTGACCTCTCCCAACACATCCAGTACCATTGCACAGAGGATGGGGGTCTCAAGAGAGCCACTGTCACACTCCTCTGGCCCAGCAAGATGGAGGTGGAGGGCTTTGCTCGCAAGAAGATTGATGCTGAACgatacgctgctgctgctgcctgtcacAAGCTGAGGGAGATGGGTGTGCTGGGTCCAGACAATCAGGTGGCCAGGAGGAGTGTGGGACGAGGGCGAAGACCGCCACTGTCAGCCTTACAGGACCTGGAGGAGTGTCGGTGGACAGATGTCCATGTGCCTAGAAGAGACCTCCAGAATGGATCCTTGGAACCTCACATACAATCAAGTGTATACAGGGCACCTGAGGAGAATTCTGAGCTCTCCCAGGCTCTTTCCATGTTCGTAAATCCTAAAGCTCTGCTGACCAGGGTCATCCAGGTGGCCACGTCCTCCAACAGATTCAGGGAACTGGTACAGTACAAGACGGTGGGCGGTAAGATGAAGAGATGTGAGCTGACCATGCGATGGCCAGAGGAGATTACGTTTGTGGCCTCGGCTCTTCGCAGAGTcgaggcagagaggagagctgCTGCACTGGCCTGTCTCAAACTGAAGGAAATGGAGCTGCTAGATGAGGACAACCAACCTCTGACCCATGCTAAGTACCACAAGGAGGAGATGCGTGAGgcggggcagagagacagagagccctgCCATCTGGAGATACCCGAGTACTTGGAGCATAGCACCAGAGAATACCTCACACAGTATCCAGTGGCGACAGAGATGCAGAAgctgtgggaggaggaggaggagagaagccaGCAAAGGTTGAACCAGCAggacgaagaggaggaagaggaccttGTCACAGACGCCATCACAGGCAGGCCATACCGGCCCCTCTCTACCCAGGAGGCCGAGCAGCTGAGCTCCGACCTacaggaggagtgggagagggcaGGGCCTGGCCTGGGGGTGGAGCTCCCAGTCGACTCCCACCGGGAACGCGTTGTGTCAGCGGTGGAGTCCTCCAGGGTCATTGTGGTTGCTGGGGAGACGGGATGTGGCAAGACAACGCGTATCCCGCTCTTCCTTCTGGAGGGGCGTGTGCGGATCGGGGAGGGAGCGGAGTGTAACATCTTGGTCACCCAGCCTCGGAGGATTAGCGCTGTGTCAGTGGCTCACCGTGTTGCCCACGAGATGGGCCCCGCCCTCAAACGCTCTGTAGGGTATCAGGTGCGTCTGGAGAGCCGTCCCCCGGAGCACAGCGGTGGGGCCCTTCTCTTCATGACGGTGGGGGTGTTACTGAGGAAGCTGCAGGGTAACGCCTCCCTGAGGGGGGTTAGCCATGTGGTGGTGGATGAGGTCCACGAGAGGGACGTCAATACGGACCTGCTGCTGGCCCTGCTGCGACCCGCCCTAAGGGACAACCCCAACCTCCGCGTCGTGCTGATGAGCGCCACAGGGGATAACCAGAGGCTGGCCCAGTACTTCGGGGACTGCCCTGTGGTCAGTGTTCCCGGGTTCATGCACCCTGTCAGGGATCGGTACCTGGAGGAGGTCCTTAGGGAGATGGGGAGACCACCGCCACCCCCGGCAAGGACAGACCTGCAGGGACGGGAGAAGGATGATGCCACGCCAGACCTGGACTTAGTAGCTAATGTGATAGAGCACATCCACAGACAGGGAGAGCCAGGTGCAGTGCTGTGTTTCCTACCAGGTTGGCAGGACATTAAGGCTGTCCAGAAGAGACTAGAGGAGAAGCCAACCTTCCAGTCTGGCTCTCAAATGATCCTACCATtACACTCAAGTATGTCGGTGGGTGACCAGCAGACCGTGTTCCAGCGCCCTCCTGAGGGCCGGAGGAAGATCGTCCTGGCCACCAACATCGCTGAGACCTCTATCACCATCGACGACATTGTTCATGTAGTAAACGCGGGCTCTCAGAAGGAGCAGAACTATGACACACGGACCAAGGTGTCATGTCTAGACACAGTCTGGATCTCGCGCTCCAACGTCACTCAGCGTAGAGGGAGGGCGGGGCGATGCCAGCCCGGACATGCCTACCACCTGTTCCCACGGCAACGCCTGGAATCAATGACGACCTTCCCTGTGCCTGAGATCCTACGCACCCCTCTGGAGAGCCTGGTGGTACAGGCCAAGATCCACAGCCCCCACTGCAAGGCAGTGGATTTCTTATCGCAGGTGTTGGACAGCCCAGAGCGAGAGGCTGTGACCGATGCTGTTCGCAACCTGCAAGAGATTGgTGTTCTGGACAAGACAGAGGCCCTGACTCCCCTGGGGGAGAGAGTAGCCTGTCTGTCCTGTGACCCGCGCCTGGGGAAGGTGCTGGTGCTTGCTGCTCTGTTCCGCTGTGTCCTGCCCCTGCTGTCAGTCACAGCCTGTCTCACCAGAGACCCTTTCCACAACAGCATGCAGAACAGAGCCCTGGTCTCTAAGGCTAAGGAAGACCTGGGAGGTTCAAGCTACAGTGATTACCTGGTGTTCAGTCGAGCCGTGTTGGGCTGGAGGAGTGTTCagcaagagagggacagagagaccagacaggaCTACTTGAACAGATACACACTGTCTGGAGCCGGCCTGCGCTTCATCAATgGTCTGACTTCCCAGTTCAGTGAGAACCTCCTTGAGGCTGGGCTGGTGGAGCGTTCAGCTGACTGCCAGAGATCCTCCTCCCTCTACAACCAACACAGCCACCAGGACGAGCTGGTCAAGGCTGTGCTGCTGGCCGGACTCTACCCCAACCTCATACAGGTGAAAAGGGGAGCAGTGACCAAAGGTCGCTTCCGCCCCAACAGCCTGTCCTTCCGTACGCAGAGTGGGCCAGTGCTCCTACACCGCTCCTCCGTCAACAGGGGAAAGGAGCAGTTTCCCAGTCGCTGGCTGACCTTCTTCAGTGCAATCAAGTCCAACGGTAATGTCTTCATCAGAGACTCCTCAGCAGCCCACCCCCTCGCCCTACTTCTGCTCACCGACTGTGACATCACTGAGAGAGTGAATGGTGACCGTGTGGAGGTGGCGTTCCCGGGGCGGTCGCTGGTACGCTGTGAGCTGTCTGTCCAGACATGGGAGCTGCTGTGGGAGCTACGCTCCTCCATCCAGACCATGCTGTACCGCAACCTCCACCCACACAGCTCAGCCAATTACATCACACAGGATGGCAAGCTCATCTCGCTATTGGTGGAGCTGCTGAACAATACTGAGTCCAATACAGACCCCCAGCCAAACGGTGGCCACAGTGACTCTGAGGTAGACTGATTCACTCGCATTGGAATAAAGGAATGTCAAAGCACTGTGGATGGAGTACTGCTTTGTGACCTGAAAAAACACTGGATGGAGTACTGCTTTGTGACCTGAAAAAACTCTGGCCGTAGCAAGAGTCCATAGATTTTTCTGGTCAGGAAAAAAGTACCAATGCAAAATGCTCGAGGCACGGTCTGCTGACAAATCTGAGAAGACATGTAATATCGGTTAACTGTACAATACTATCCATAGTTCACTACCCATTCTAAATGTCCTCCTCACCTGAGATACACGGAGAAATAATGAGAATTTTTGGAAATATAGATGAATGGGAACACTGAGTTTACAATGGAGTTCAGGAAAATACATCATGCCCTGAAGGTTTGACTCTTAAACTATATTTCAAGAGCCCCATTTAAATAGGAGTGAACTCATGGTACTGTAAATACTACTGTGATTGCTCTCTATATGGGAGGAAATCCATTTGTTTGACTAGATTATGGACTCAAGtatatttgttttttgaaaagcAGAAGTTGAATGAATCTGACTGTTAATGAGTGTCTAGTGACCTGTGCACTACAGTGAGACGGTGTCAAGATGACAGCGAGACGGTGTCAAGATGACAGCGAGACGGTGTCAAGATGACAAAATAATGATTACATGAATGTATTGTTaaccattattttttatttaaatatggTCTGTTGAAATATAAAGATGTTAAACAATGTTA
>XM_036986069.1
TGCTGTTTACCACCATATCCCGGTCGCTTGGGGTGTCTGACCTCTCCCAACACATCCAGTACCATTGCACAGAGGATGGGGGTCTCAAGGTCAGAGAGACAAGGCATTAGAGAGCCACTGTCACACTCCTCTGGCCCAGCAAGATGGAGGTGGAGGGCTTTGCTCGCAAGAAGATTGATGCTGAACgatacgctgctgctgctgcctgtcacAAGCTGAGGGAGATGGGTGTGCTGGGTCCAGACAATCAGGTGGCCAGGAGGAGTGTGGGACGAGGGCGAAGACCGCCACTGTCAGCCTTACAGGACCTGGAGGAGTGTCGGTGGACAGATGTCCATGTGCCTAGAAGAGACCTCCAGAATGGATCCTTGGAACCTCACATACAATCAAGTGTATACAGGGCACCTGAGGAGAATTCTGAGCTCTCCCAGGCTCTTTCCATGTTCGTAAATCCTAAAGCTCTGCTGACCAGGGTCATCCAGGTGGCCACGTCCTCCAACAGATTCAGGGAACTGGTACAGTACAAGACGGTGGGCGGTAAGATGAAGAGATGTGAGCTGACCATGCGATGGCCAGAGGAGATTACGTTTGTGGCCTCGGCTCTTCGCAGAGTcgaggcagagaggagagctgCTGCACTGGCCTGTCTCAAACTGAAGGAAATGGAGCTGCTAGATGAGGACAACCAACCTCTGACCCATGCTAAGTACCACAAGGAGGAGATGCGTGAGgcggggcagagagacagagagccctgCCATCTGGAGATACCCGAGTACTTGGAGCATAGCACCAGAGAATACCTCACACAGTATCCAGTGGCGACAGAGATGCAGAAgctgtgggaggaggaggaggagagaagccaGCAAAGGTTGAACCAGCAggacgaagaggaggaagaggaccttGTCACAGACGCCATCACAGGCAGGCCATACCGGCCCCTCTCTACCCAGGAGGCCGAGCAGCTGAGCTCCGACCTacaggaggagtgggagagggcaGGGCCTGGCCTGGGGGTGGAGCTCCCAGTCGACTCCCACCGGGAACGCGTTGTGTCAGCGGTGGAGTCCTCCAGGGTCATTGTGGTTGCTGGGGAGACGGGATGTGGCAAGACAACGCGTATCCCGCTCTTCCTTCTGGAGGGGCGTGTGCGGATCGGGGAGGGAGCGGAGTGTAACATCTTGGTCACCCAGCCTCGGAGGATTAGCGCTGTGTCAGTGGCTCACCGTGTTGCCCACGAGATGGGCCCCGCCCTCAAACGCTCTGTAGGGTATCAGGTGCGTCTGGAGAGCCGTCCCCCGGAGCACAGCGGTGGGGCCCTTCTCTTCATGACGGTGGGGGTGTTACTGAGGAAGCTGCAGGGTAACGCCTCCCTGAGGGGGGTTAGCCATGTGGTGGTGGATGAGGTCCACGAGAGGGACGTCAATACGGACCTGCTGCTGGCCCTGCTGCGACCCGCCCTAAGGGACAACCCCAACCTCCGCGTCGTGCTGATGAGCGCCACAGGGGATAACCAGAGGCTGGCCCAGTACTTCGGGGACTGCCCTGTGGTCAGTGTTCCCGGGTTCATGCACCCTGTCAGGGATCGGTACCTGGAGGAGGTCCTTAGGGAGATGGGGAGACCACCGCCACCCCCGGCAAGGACAGACCTGCAGGGACGGGAGAAGGATGATGCCACGCCAGACCTGGACTTAGTAGCTAATGTGATAGAGCACATCCACAGACAGGGAGAGCCAGGTGCAGTGCTGTGTTTCCTACCAGGTTGGCAGGACATTAAGGCTGTCCAGAAGAGACTAGAGGAGAAGCCAACCTTCCAGTCTGGCTCTCAAATGATCCTACCATtACACTCAAGTATGTCGGTGGGTGACCAGCAGACCGTGTTCCAGCGCCCTCCTGAGGGCCGGAGGAAGATCGTCCTGGCCACCAACATCGCTGAGACCTCTATCACCATCGACGACATTGTTCATGTAGTAAACGCGGGCTCTCAGAAGGAGCAGAACTATGACACACGGACCAAGGTGTCATGTCTAGACACAGTCTGGATCTCGCGCTCCAACGTCACTCAGCGTAGAGGGAGGGCGGGGCGATGCCAGCCCGGACATGCCTACCACCTGTTCCCACGGCAACGCCTGGAATCAATGACGACCTTCCCTGTGCCTGAGATCCTACGCACCCCTCTGGAGAGCCTGGTGGTACAGGCCAAGATCCACAGCCCCCACTGCAAGGCAGTGGATTTCTTATCGCAGGTGTTGGACAGCCCAGAGCGAGAGGCTGTGACCGATGCTGTTCGCAACCTGCAAGAGATTGgTGTTCTGGACAAGACAGAGGCCCTGACTCCCCTGGGGGAGAGAGTAGCCTGTCTGTCCTGTGACCCGCGCCTGGGGAAGGTGCTGGTGCTTGCTGCTCTGTTCCGCTGTGTCCTGCCCCTGCTGTCAGTCACAGCCTGTCTCACCAGAGACCCTTTCCACAACAGCATGCAGAACAGAGCCCTGGTCTCTAAGGCTAAGGAAGACCTGGGAGGTTCAAGCTACAGTGATTACCTGGTGTTCAGTCGAGCCGTGTTGGGCTGGAGGAGTGTTCagcaagagagggacagagagaccagacaggaCTACTTGAACAGATACACACTGTCTGGAGCCGGCCTGCGCTTCATCAATgGTCTGACTTCCCAGTTCAGTGAGAACCTCCTTGAGGCTGGGCTGGTGGAGCGTTCAGCTGACTGCCAGAGATCCTCCTCCCTCTACAACCAACACAGCCACCAGGACGAGCTGGTCAAGGCTGTGCTGCTGGCCGGACTCTACCCCAACCTCATACAGGTGAAAAGGGGAGCAGTGACCAAAGGTCGCTTCCGCCCCAACAGCCTGTCCTTCCGTACGCAGAGTGGGCCAGTGCTCCTACACCGCTCCTCCGTCAACAGGGGAAAGGAGCAGTTTCCCAGTCGCTGGCTGACCTTCTTCAGTGCAATCAAGTCCAACGGTAATGTCTTCATCAGAGACTCCTCAGCAGCCCACCCCCTCGCCCTACTTCTGCTCACCGACTGTGACATCACTGAGAGAGTGAATGGTGACCGTGTGGAGGTGGCGTTCCCGGGGCGGTCGCTGGTACGCTGTGAGCTGTCTGTCCAGACATGGGAGCTGCTGTGGGAGCTACGCTCCTCCATCCAGACCATGCTGTACCGCAACCTCCACCCACACAGCTCAGCCAATTACATCACACAGGATGGCAAGCTCATCTCGCTATTGGTGGAGCTGCTGAACAATACTGAGTCCAATACAGACCCCCAGCCAAACGGTGGCCACAGTGACTCTGAGGTAGACTGATTCACTCGCATTGGAATAAAGGAATGTCAAAGCACTGTGGATGGAGTACTGCTTTGTGACCTGAAAAAACACTGGATGGAGTACTGCTTTGTGACCTGAAAAAACTCTGGCCGTAGCAAGAGTCCATAGATTTTTCTGGTCAGGAAAAAAGTACCAATGCAAAATGCTCGAGGCACGGTCTGCTGACAAATCTGAGAAGACATGTAATATCGGTTAACTGTACAATACTATCCATAGTTCACTACCCATTCTAAATGTCCTCCTCACCTGAGATACACGGAGAAATAATGAGAATTTTTGGAAATATAGATGAATGGGAACACTGAGTTTACAATGGAGTTCAGGAAAATACATCATGCCCTGAAGGTTTGACTCTTAAACTATATTTCAAGAGCCCCATTTAAATAGGAGTGAACTCATGGTACTGTAAATACTACTGTGATTGCTCTCTATATGGGAGGAAATCCATTTGTTTGACTAGATTATGGACTCAAGtatatttgttttttgaaaagcAGAAGTTGAATGAATCTGACTGTTAATGAGTGTCTAGTGACCTGTGCACTACAGTGAGACGGTGTCAAGATGACAGCGAGACGGTGTCAAGATGACAGCGAGACGGTGTCAAGATGACAAAATAATGATTACATGAATGTATTGTTaaccattattttttatttaaatatggTCTGTTGAAATATAAAGATGTTAAACAATGTTA

Function

symbol description
dhx30 Predicted to enable several functions, including ATP binding activity; RNA binding activity; and RNA helicase activity. Orthologous to human DHX30 (DExH-box helicase 30).

NR:

description
putative ATP-dependent RNA helicase DHX30

GO: NA

KEGG:

id description
K13185 DHX30; ATP-dependent RNA helicase DHX30

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613516.2 False 4265 mRNA 0.54 20 70135455 70148930
XM_036986069.1 True 4050 mRNA 0.55 19 70135941 70148930

Neighbor

gene id symbol gene type direction distance location
wrnip1 wrnip1 coding upstream 8005 70103165 ~ 70127450 (+)
LOC110530442 foxc1 coding upstream 407981 69725327 ~ 69727474 (+)
foxf2a foxf2 coding upstream 432137 69699633 ~ 69703318 (+)
LOC110530440 foxq1 coding upstream 441493 69692289 ~ 69693962 (+)
LOC100499175 LOC106569154 coding upstream 544416 69578994 ~ 69591039 (+)
LOC110530450 LOC106569144 coding downstream 23501 70172431 ~ 70186472 (+)
LOC110530454 LOC106569140 coding downstream 302077 70451007 ~ 70460534 (+)
LOC110530455 LOC106569138 coding downstream 314918 70463848 ~ 70493098 (+)
rpe65a LOC106569137 coding downstream 367558 70516488 ~ 70525948 (+)
LOC110530463 dtna coding downstream 556144 70705074 ~ 70743483 (+)
G741455 NA non-coding upstream 28390 70106153 ~ 70107065 (+)
G741425 NA non-coding upstream 73095 70055936 ~ 70062360 (+)
G741417 NA non-coding upstream 87087 70048141 ~ 70048368 (+)
G741369 NA non-coding upstream 134258 70000866 ~ 70001197 (+)
G741162 NA non-coding upstream 288021 69847173 ~ 69847434 (+)
G741494 NA non-coding downstream 18533 70167463 ~ 70168134 (+)
G741499 NA non-coding downstream 24355 70173285 ~ 70173781 (+)
G741547 NA non-coding downstream 122818 70271748 ~ 70275710 (+)
G741665 NA non-coding downstream 286235 70435165 ~ 70435374 (+)
G741654 ccd16 non-coding downstream 292541 70441471 ~ 70463579 (+)
G740827 ripk1 other upstream 597179 69536400 ~ 69538276 (+)
G739708 NA other upstream 1130339 69004337 ~ 69005116 (+)
G739670 NA other upstream 1228490 68903365 ~ 68906965 (+)
G739648 NA other upstream 1276702 68858383 ~ 68858753 (+)
LOC110530413 NA other upstream 2212833 67904516 ~ 67924427 (+)
G742095 NA other downstream 477291 70626221 ~ 70626744 (+)
G742860 NA other downstream 1546672 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 2393796 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 2485954 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2711478 72779485 ~ 72872336 (+)

Expression


Co-expression Network