XLOC_025871


Basic Information

Item Value
gene id XLOC_025871
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 60383122 ~ 60401867 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052838
GTTTACATGGGGGGAGATCAATGTAGtggtcactcttcatagacACACAGCTAGATAATGGAGAAACTGCTCTCACAGTCTGAATGAAagcctccctctctctctcttcaaacACACTCATTTCACATGGATGTTTAGCTTTCCTTTCCATCCTTAATGACTACTTTCATTGGCTTTTCTATTTCTCCTCCTATCACATTAGAGACTTGATTTCAGGCCTGTATGTGGAGACAGAAACACACAATATACATGATATTTT

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052838 True 259 lncRNA 0.40 2 60383122 60401867

Neighbor

gene id symbol gene type direction distance location
XLOC_025870 NA coding upstream 25150 60356214 ~ 60357972 (+)
XLOC_025857 sec14l1 coding upstream 100740 59411956 ~ 60282382 (+)
XLOC_025869 xylt2 coding upstream 157095 60177774 ~ 60226027 (+)
XLOC_025864 zgc:174268 coding upstream 279184 60034194 ~ 60103938 (+)
XLOC_025866 zgc:113030 coding upstream 308517 60044780 ~ 60074605 (+)
XLOC_025873 NA coding downstream 36247 60438114 ~ 60439578 (+)
XLOC_025874 NA coding downstream 141246 60543113 ~ 60544139 (+)
XLOC_025875 mettl23 coding downstream 187290 60589157 ~ 60592979 (+)
XLOC_025876 mfsd11 coding downstream 205374 60607241 ~ 60624039 (+)
XLOC_025877 CABZ01068050.1 coding downstream 244869 60646736 ~ 60648234 (+)
XLOC_025429 BX649540.1 misc upstream 30134086 30248739 ~ 30249036 (+)
XLOC_025868 NA non-coding upstream 315354 60066388 ~ 60067768 (+)
XLOC_025865 NA non-coding upstream 339225 60037550 ~ 60043897 (+)
XLOC_025856 NA non-coding upstream 1158926 59212160 ~ 59224196 (+)
XLOC_025853 NA non-coding upstream 1355285 59024934 ~ 59027837 (+)
XLOC_025878 NA non-coding downstream 275367 60677234 ~ 60684970 (+)
XLOC_025881 NA non-coding downstream 395556 60797423 ~ 60798872 (+)

Expression


Co-expression Network