LOC110530464 (mapre2)


Basic Information

Item Value
gene id LOC110530464
gene name mapre2
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 70758004 ~ 70771560 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613542.2
GCTGGTTCTTTGTCGAATGAAACATGTGTACGTTATCGGCGTCATCAGCTCCTACAATGAGTGGAAAGAGGGTGGGGTGACTCAGGAAAATAGCAGCTTTTGAACACCGAATAACCTGAAATCTGAGTTCACTGTTGGGGGATGGCGGTCAACGTATATTCTACCTCAATAACCCAGGAGACTATGAGCAGGCATGATATCACTGCCTGGGTTAATGATCTTCTCGGTCTGAACTACACTAAAGTGGAGCAGCTTTCCTCAGGAGCAGCCTACTGCCAGTTCATGGATTTGCTGTTCCCTGGTTGCGTCCATCTTAAGAAGGTTAAGTTCCAGGCTAAATTCGAGCATGAGTACATTCATAACTTCAAGCTGCTGCAGGCCTCTTTCAAGAGAATGAATGTGGACAAGATTATTCCTGTGGAGAAGCTTGTGAAAGCCAGATTTCAGGACAACCTTGACTTCATCCAGTGGTTTAAGAGGTTCTTTGATGCCAACTATGACGGTAAGGATTACGACCCACTTCAGGCCAGACAGGGTCAGGATGCCATCCCCCCACCTGACCCCGGTGAGCAGATCTTCAACCTGCCAAAAAAGTCCCAACACCACGCAGCCAGCTCCCCCACTGCAGGAGCCACCAGGGCAAGTGCAACAACTCCGAAACAAAACCCCTGCAGCCCCCATCCATCCTCCAGACCCTCTTCAGCGAAAAGAATCCCAGTTGCAACTCCAACGACAACTCCGGCCAAAGGAGAGCGGGAACTGGAAGCACAGGTCACAGGGCTCAACGACCAGGTGAACACATTAAAACTTGCACTTGAGggtgtggagaaggagagggacttTTACTTTGGAAAGCTGCGGGATGTGGAAGTCCTGGCACAGGAACAAGGTCAGGAGAGCGCCCAGTTCGTGGAGCGGCTAATGGAGATTCTGTACTCTGCAGACGAACAGGAAGGtgcaggagaggtggatggagaagATGTGGATCCAGGGGTCCATGAAGAGGATGTTCCTGATGATCAGCAGGATGAGTACTGACTGCCATCACTCCTTGTTCTTGCCCCGGGCCCCACCACAACGCCATGCCCTTTTGTTTTGTGAGAATTTTGTTAcaggttttattttttattatttttttctcatttgtaTTTTCTTCCCCTCGtggtttgtttattttttttgttctcCTGAAGACTGAGCACATGAAACAACCTCATGCAAAGAAACATGACCCtagtttattttatatatatata
>XM_021613541.2
CGTCACCAGAGACAGATTTGTGAAGAATAAGCAGACTAGAGAACGAGCCCGAGGTGCGTCACTTTATATTGCATCGTCctttcatagagagagagagcagataatCTGTTCAATATTTTAGAGACCCAATGCCTGGTCCCACCCAAGCACTGTCCCCAAATGGAGAGAATAACAACGACATCATCCCAACGGACGGATCCAACTGCATTCCTTACAGAAAAAATACAGTGCGAGGAGAGCGCGCCTACAGTTGGGGGATGGCGGTCAACGTATATTCTACCTCAATAACCCAGGAGACTATGAGCAGGCATGATATCACTGCCTGGGTTAATGATCTTCTCGGTCTGAACTACACTAAAGTGGAGCAGCTTTCCTCAGGAGCAGCCTACTGCCAGTTCATGGATTTGCTGTTCCCTGGTTGCGTCCATCTTAAGAAGGTTAAGTTCCAGGCTAAATTCGAGCATGAGTACATTCATAACTTCAAGCTGCTGCAGGCCTCTTTCAAGAGAATGAATGTGGACAAGATTATTCCTGTGGAGAAGCTTGTGAAAGCCAGATTTCAGGACAACCTTGACTTCATCCAGTGGTTTAAGAGGTTCTTTGATGCCAACTATGACGGTAAGGATTACGACCCACTTCAGGCCAGACAGGGTCAGGATGCCATCCCCCCACCTGACCCCGGTGAGCAGATCTTCAACCTGCCAAAAAAGTCCCAACACCACGCAGCCAGCTCCCCCACTGCAGGAGCCACCAGGGCAAGTGCAACAACTCCGAAACAAAACCCCTGCAGCCCCCATCCATCCTCCAGACCCTCTTCAGCGAAAAGAATCCCAGTTGCAACTCCAACGACAACTCCGGCCAAAGGAGAGCGGGAACTGGAAGCACAGGTCACAGGGCTCAACGACCAGGTGAACACATTAAAACTTGCACTTGAGggtgtggagaaggagagggacttTTACTTTGGAAAGCTGCGGGATGTGGAAGTCCTGGCACAGGAACAAGGTCAGGAGAGCGCCCAGTTCGTGGAGCGGCTAATGGAGATTCTGTACTCTGCAGACGAACAGGAAGGtgcaggagaggtggatggagaagATGTGGATCCAGGGGTCCATGAAGAGGATGTTCCTGATGATCAGCAGGATGAGTACTGACTGCCATCACTCCTTGTTCTTGCCCCGGGCCCCACCACAACGCCATGCCCTTTTGTTTTGTGAGAATTTTGTTAcaggttttattttttattatttttttctcatttgtaTTTTCTTCCCCTCGtggtttgtttattttttttgttctcCTGAAGACTGAGCACATGAAACAACCTCATGCAAAGAAACATGACCCtagtttattttatatatatata

Function

symbol description
mapre2 Predicted to enable microtubule plus-end binding activity. Acts upstream of or within embryonic cranial skeleton morphogenesis. Predicted to be located in cytoplasm and microtubule. Predicted to be active in microtubule cytoskeleton. Human ortholog(s) of this gene implicated in congenital symmetric circumferential skin creases 2. Orthologous to human MAPRE2 (microtubule associated protein RP/EB family member 2).

NR:

description
PREDICTED: microtubule-associated protein RP/EB family member 2 isoform X1

GO: NA

KEGG:

id description
K10436 MAPRE; microtubule-associated protein, RP/EB family

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613542.2 False 1256 mRNA 0.48 7 70758004 70771560
XM_021613541.2 True 1372 mRNA 0.48 7 70765623 70771560

Neighbor

gene id symbol gene type direction distance location
LOC110530463 dtna coding upstream 14521 70705074 ~ 70743483 (+)
rpe65a LOC106569137 coding upstream 232056 70516488 ~ 70525948 (+)
LOC110530455 LOC106569138 coding upstream 264906 70463848 ~ 70493098 (+)
LOC110530454 LOC106569140 coding upstream 297470 70451007 ~ 70460534 (+)
LOC110530450 LOC106569144 coding upstream 571532 70172431 ~ 70186472 (+)
LOC110530465 LOC106569128 coding downstream 59151 70830711 ~ 70841350 (+)
LOC110530467 ub2v2 coding downstream 69947 70841507 ~ 70844898 (+)
LOC110530469 LOC106569124 coding downstream 164844 70936404 ~ 70975314 (+)
LOC110530474 LOC106569352 coding downstream 363822 71135382 ~ 71412296 (+)
asic1c LOC106569349 coding downstream 709404 71480964 ~ 71640255 (+)
G742131 NA non-coding upstream 79107 70678694 ~ 70678897 (+)
G742130 NA non-coding upstream 81330 70675587 ~ 70676674 (+)
G742120 NA non-coding upstream 99552 70658249 ~ 70658452 (+)
G742116 NA non-coding upstream 105413 70652140 ~ 70652591 (+)
G742115 LOC106569133 non-coding upstream 106876 70650336 ~ 70651128 (+)
G742195 NA non-coding downstream 41388 70812948 ~ 70813165 (+)
G742220 NA non-coding downstream 98009 70869569 ~ 70869813 (+)
G742222 NA non-coding downstream 99009 70870569 ~ 70870774 (+)
G742224 NA non-coding downstream 101293 70872853 ~ 70873079 (+)
G742228 NA non-coding downstream 104943 70876503 ~ 70876781 (+)
G742095 NA other upstream 131260 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 1219728 69536400 ~ 69538276 (+)
G739708 NA other upstream 1752888 69004337 ~ 69005116 (+)
G739670 NA other upstream 1851039 68903365 ~ 68906965 (+)
G739648 NA other upstream 1899251 68858383 ~ 68858753 (+)
G742860 NA other downstream 924042 71695602 ~ 71715616 (+)
LOC110530976 LOC106569323 other downstream 1771166 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 1863324 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 2088848 72779485 ~ 72872336 (+)
G744696 NA other downstream 2090696 72862256 ~ 72864703 (+)

Expression


Co-expression Network