XLOC_025873


Basic Information

Item Value
gene id XLOC_025873
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 60438114 ~ 60439578 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052839
CTGCCCTGCAAATCAAATAAGCCTGACTCTAGATCAGAAGAACTGAGCCCTTTAGGCACTGTCAGACCTGATGACCTGAAACCGCGATTTCATCTTTTAGGTGTTGCATTTTCCTCTATGCTTGGTTCACTTTAGTAGATAACAATTTAAAGTATACCAGAATGTAGGTCACATGTGAATATATCAGTTTTCTCTTTGGTCAAAGTGAACCATTTTACCCCACATTCATCAAAACGAATTGACAAGTTCTCTCCAAGGGCTAGTTATTTTAGCATTTCGTGACACATCCACATATAGCTGTGACtgatacattatttacatttaattataccTAAATACTTATTACACTGCAAGAATCAAGACCGCGCAGAGAAGAGCAATTACACACTATTTTAAGATGAAGAGGCACTCTGGTTTTCAGCTGTGATAACGAATGTCCTCGCTCACAGAATCAGACTCTGTAACACATTTCCTCTTATGAATTATGATACTACTTGGTTCACTGGTCCGTTGGGTCGGCTTGCCTTTTCACCTAAAATGAACCTCCCCGGACTTTGTTTTCCATTCTCCAGAAGATCTCAGACCATTTTTGTGCAGATCTAAACGGTCATGTTCAGATATGCCTTAACAAATGGAAATGAGATAGAACAAACTTACCTAATTCTGAAACAAATGTTATACCAAAATAGAAAACTGCATCAGAAACTGTATCCACAtaggctcattctgaaaatctagtcctgtatacatttttggagatcgtgaattatgtagccagaggcacgtatggctgcatttcgtctttaaaacaaatgctacgaaGTGGCATGACCCCGTTCCTTTCCACGCttatcagctgaccgcttacctccatgtggacggcttttccggtgttaccagtttgtccaatggCTCGCCGTATGCGTGGGTAGACTTGTGATGTGCAGCAGAGTTGACCAAGACTATTGGGTTCAGGTTGTGGCAAAGAATGGTATAGAAAGCAggtataacaaaaaacaaaaattaaaataagtacattacaaggtgagaatgtggtaaaatctgaaaacattgtgaaaatcaggctgccgcaagggcttttctttttctggattgcttttgataACACTGTTGGTTAGAATTAGAAAAGGCGGTGGGTgttggtcaatctgtgcttttgataaaacttttggttgggtttaggggaggaggaGGGATCGTTCAGTagatcagtcagtcaacagcggcctctggtggatttatg

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052839 True 1264 lncRNA 0.40 2 60438114 60439578

Neighbor

gene id symbol gene type direction distance location
XLOC_025871 NA coding upstream 36247 60383122 ~ 60401867 (+)
XLOC_025872 NA coding upstream 49219 60388249 ~ 60388895 (+)
XLOC_025870 NA coding upstream 80142 60356214 ~ 60357972 (+)
XLOC_025869 xylt2 coding upstream 212087 60177774 ~ 60226027 (+)
XLOC_025866 zgc:113030 coding upstream 363509 60044780 ~ 60074605 (+)
XLOC_025874 NA coding downstream 103535 60543113 ~ 60544139 (+)
XLOC_025875 mettl23 coding downstream 149579 60589157 ~ 60592979 (+)
XLOC_025876 mfsd11 coding downstream 167663 60607241 ~ 60624039 (+)
XLOC_025877 CABZ01068050.1 coding downstream 207158 60646736 ~ 60648234 (+)
XLOC_025878 NA coding downstream 237656 60677234 ~ 60684970 (+)
XLOC_025429 BX649540.1 misc upstream 30189078 30248739 ~ 30249036 (+)
XLOC_025868 NA non-coding upstream 370346 60066388 ~ 60067768 (+)
XLOC_025865 NA non-coding upstream 394217 60037550 ~ 60043897 (+)
XLOC_025881 NA non-coding downstream 357845 60797423 ~ 60798872 (+)
XLOC_025883 NA non-coding downstream 421669 60861247 ~ 60862752 (+)

Expression


Co-expression Network