c8h1orf35 (cssa14h1orf35)


Basic Information

Item Value
gene id c8h1orf35
gene name cssa14h1orf35
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 71828037 ~ 71832556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613612.2
CCTCAACCGAGTACATTCAAAAAGGAAACGGTGTCGTATTTTTGTGAGCGTTTAAACTCCGCACGCGATACAAAGACCTTTTGAAAATCTACATCCAACCCAATAAACAGAAATAATATAATTACTTCATATAAGCATTTTACAGGGGTTGCAGATTCAGTATTACGAACTGTGCGTAATGAACGCCAACAGCTAAAAAGAGCTATTTGCGTGCAGATGATCGGCGCACAAACACGCGAGACCGAATAGTCTCGCGTTCTTGGTTTTTcacttgtttagctagctaactcagTTTATTCGAAACACGGAAAAGGTTACTATCCATGCTTCTAACCATCGCTTACTATATCGTCGTAAGCGGACGTGGGAGAGAAAAGCCAGAAGGAAACTCCCCGGATGAACAACGAGAGGGCCTAACGTGTAAACAAAGCTTTCATCGTCTTTATTCAACGCTAAAATAATGTTTGGTGCTTCAAGATCTGGGGGTGTAAGGGGGGGGCAAGACCAATTCAACTGGGATGACGTGAAAGGCGATAAACACAGGGAAAACTACCTCGGGAACTCTCTTATGGCACCAGTGGGGCGATGGCAGAAAGGCAAAGATCTGACGTGGTATACCAAAGACAAAAAAGGTGGTGTCAAGCCTATGTCAAGAGAAGAGGAGCTTGCTGCTGTGAAGGCAGCAGAGCAAGAGGCACTGCTGGCTGCCCTAGGCCACAAGAATATAAAGAGACAACCATCTGGCCTGACCAAAGAGGACCTTGCAGATGTGTGCAGGAGGGAGGATGCGGAAGCTGAGGACAGAGATGTGGACAGAGTTTCTGGCCTTGGAAGCTCCGGTGCAACGTCACGGAAAATGGTGTTCTCCCAACAGGAGAAGGAAGCTGCCAAAATAGGCTTGTCAGTCTTCACACACCATAAAACAGAAGGGAAGTCTGGAAACCAGGAAGCCTCTGCCAGAAAAACATCTGCGAACACAGAGAAACAGGATGTGGATCAAAGACACGATAGCAGCAAAAAGAAGGAAAAGAAGCGCAAAAAGAAGAAAAGGCAGAGAAGAGACTCTTCCTCCTCCGATTCAGAAGATGACAAAAGGCGCAGAAAGGACCACCGTCATCATAATCCATCATGCCTCAGTCAGACTGGAGCCAGACCCCATGACAGCCATTCAAAGGGGGGACCAAAGGGTGAAcgccaccccctctcctctcaacgACGCCAGCAGAGGCATGACACACACTCCTCCCACAGGGAGTCCCCCGTCCCCCGCGCCAGCCACAAGGCAGCCCATGCTGCTCTGACACAAAGCCACAGGCGGCGCCATGACACAGACTCTGACGAataatatcccccccccccccactcagacacattgagggagaggagtGCTCTATAGCCCACAGCAGAGCAGCTTGACTGGTCTATGAACTGGACTCAAGGGCTGTGGTTGAGAACAGTAGGTCAATCTGTAGGCTACTCCTCAAACCACTAGCAGGCTTGTGTCCTTATTTGAACAGACCAGtttttatttgtgttgaattttgAATTGTTAAATTTGTTTCTATTGGTATTTTATTTTTCTGAACCAgctcaaatgtattttatgtgtCTAGCTACCAACATTGAAGGACACTATTCATACAATTGAATCAGGGACTACCGAAAGCAAGTTAAGTGCATGTGTTCTTGGTGCTGAAAATAAGTTAGTCAATACAAACTATTGCTGTCCAAGACATTAAATCCGGCGTGACACTTGcccattaaaaaatgtatttaaatgtgtGCCAACACCTAAATGTTA

Function

NR:

description
multiple myeloma tumor-associated protein 2 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613612.2 True 1801 mRNA 0.47 8 71828037 71832556

Neighbor

gene id symbol gene type direction distance location
LOC110530483 obscn coding upstream 9916 71727788 ~ 71818121 (+)
atg9b LOC106569346 coding upstream 145739 71659108 ~ 71682417 (+)
asic1c LOC106569349 coding upstream 187782 71480964 ~ 71640255 (+)
LOC110530474 LOC106569352 coding upstream 415741 71135382 ~ 71412296 (+)
LOC110530469 LOC106569124 coding upstream 852723 70936404 ~ 70975314 (+)
wnt9a wnt9a coding downstream 75003 71907559 ~ 71934937 (+)
LOC110530489 iba57 coding downstream 264836 72097392 ~ 72103866 (+)
LOC110530494 LOC106569334 coding downstream 313797 72146353 ~ 72155430 (+)
LOC110529137 LOC106569331 coding downstream 358611 72191167 ~ 72219447 (+)
LOC110530496 LOC100136504 coding downstream 508940 72341496 ~ 72345654 (+)
G742860 NA non-coding upstream 112421 71695602 ~ 71715616 (+)
G742854 NA non-coding upstream 174603 71653206 ~ 71653434 (+)
G742853 NA non-coding upstream 175202 71652483 ~ 71652835 (+)
G742748 NA non-coding upstream 189687 71580417 ~ 71638350 (+)
G742573 arf1 non-coding downstream 1071 71833627 ~ 71837764 (+)
G742904 NA non-coding downstream 11235 71843791 ~ 71844084 (+)
G743613 NA non-coding downstream 104875 71937431 ~ 71937872 (+)
G743630 NA non-coding downstream 115135 71947691 ~ 71947980 (+)
G742095 NA other upstream 1201293 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 2289761 69536400 ~ 69538276 (+)
G739708 NA other upstream 2822921 69004337 ~ 69005116 (+)
G739670 NA other upstream 2921072 68903365 ~ 68906965 (+)
LOC110530976 LOC106569323 other downstream 710170 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 802328 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 1027852 72779485 ~ 72872336 (+)
G744696 NA other downstream 1029700 72862256 ~ 72864703 (+)
G744697 NA other downstream 1034545 72867101 ~ 72868382 (+)

Expression


Co-expression Network