LOC110530489 (iba57)


Basic Information

Item Value
gene id LOC110530489
gene name iba57
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 72097392 ~ 72103866 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986150.1
GTTCTCAGTACAGACATGTTTACAGTCCGTCTAGAAACAATGATCCTGCTACCTTAAATGTGTAGATTAACATGATTGTCTAATTTCGTTGCTTATATGTACTACATAAATGTTATTTTTAAGACAACGTTGAATTAACAGACAATATCCAAGATGTACGGAAACAATATGgggcaaaaaaaataaacaaatgtagCTTTGTAATTAATATTGGGCTTGTGCATCGATAAATGTGTTCCCTTGCAATGCAAACTGAATATCATTGCCATAGCATGTAAAATAGAAAGCTATTTGTAGGTTCGAATAAACGAACCAGACCCTCCTAATTTTCGACTTATCTTTGTAATGCAAATCCCAAAATTATGTAGTTATATCGTAGATACGTCGCCAGTTTTAATCGCTTGCTAACTAGTTAGCTATATCCAGGATTTGTTTATATTATTGAATATCATGGACAGGGAGTCTTACTATAACTGCTGCAGCCTTGTCAAAATACCAAGGCAATCCTATGAAAAATTCTGGTCTTCGCACTTTGTGGATTACATAGACAAGGAGTTGAGCTATTCCAAATTCTTTAAAAAGGTACTTACTTCCCAACCACCCATTCATGTTCTCGAGGAAATTCACTAGACTGGACATGCAGAAAACAGTGGATCACTGAAGAGGGGAAACCAACCTTCCAGAAACTGCTGCAGCAATTTGGTAAATAAATGTTGTTACAGATCTATTACAATGCCCAGTAACTTTGTATTCATAATGTTGGTGTGACATGAACGAGTTTGATTAGCCTAGGCATGGGCTGTCCTGATCTGTGATTTGACAGCCATATCTCATCGTCTGTGGAATTATCTGATATAATTTGTGCTGCAGTTATGATGAACAAATAACCCATTTCTAAGTTGTTTTCACAAAAGGTTTTTCTATTGTTTTTTACCCTTGCAGATTAGACTCTGGTTCCTGTTGCAAACAGTAATGTGAAAGAATACAATGCAAACCCCAAACAAATTATTTATTCACTACTGGAAAGAATACATCCAGAATGGACACACGTCACCAAAAGGATGTCTATCTGAACGATtctaaactatcaaaataaagaaagtcgcacactccatgtataatctcccagcaatttaatgggtatttaccaacgtttcggcatcaccctgaggaaggcacagtgatgccaaaacattggtaaatacccattaaattgctgggCGATTATACATGGAGTGTGCGACTTTATTTTGATAGCttattcgccgttagtcagcacctccacacaaactattattCTGGGTGGGCGCCAGCGcatgttttttaaaatcttttaTCTGAAGTATTGACACATGTCAAGGTATTGATTTCACTGATATGTTGCCTCAGTCCAAAAGAGCAGCAGTCCAAAAGATTTGAAAGTGTTTATTTGTAATGAATAGTACTTGTACTCTTTGCGTTCTTacgaaactatgcagtattttgtttttttatgtattatttcttacactgttaccacaggaaatcttaagtcttattacatacagccgggaggaactattggatataagagcaacgccAACTTACCAGGAACACGAcaggtctgttcaacactggtccaaccaatctgattccatgcttcaagattgcttcgatcacataTGTTCCGGATGGCATCGAACAACATTGAtctatacgctgattcgCAGGGATTTTCCTTAACGCGTTTATACCACCCCAGTCTTCTTTTCTTCTGACTGGTTCAATAAGTATTGGGATACCTTGGAGGTGGACGACTACCGCTAcgtctacatggaacccaaagacTCATGGACGCCATTCCACACTGATGCGTTTCGCTCCTACAGCTTGTCAGTGAATATCTGTGGCAGTAAAAAATGTATCCTATATCCCAAGGAGCCAAGGGGCCAAGGAGAGTTTCTACAAGACAGCCATGGCAACCTTGCTTATGACATCACTACCCCCGAGCTTCAAGACAATGGGCAGTTCCCACACTCTGTTGAGGCCTGCCAACCACTAGAGATCATTCAGGAAGCGGGTGAGATCATTTGTGTGCTCAGTGGTTGGCACCATCAGGTTTATAATTTGGTCATCATGAAGTCTTGCTCTGGGATTGACTACAGGGAGTTTGCCTCTTTCCAAAAGATCATCGCTGACAACCGCATGTCTTTCTTGAGCTCTTGAAACACCTCAAATTACCCTCTGCATCTTTCAAATACCCTGACCACGTTAGGACCTCACCACGCTGCCTGTGACCTGCAGAGGATGGCTCACATTCTAGAATGCATGCTCTGCAATTACTTTAACTGGAACATTCAACTCTGAGCTCacacaacacccacccgtagatcgcactccagcaggtatatctcactggtcaccccaaagcctattcttcctttggccgcctttccttccagttctctgctgccaatgattggaacaaactgcaaaaa
>XR_005052944.1
GTTCTCAGTACAGACATGTTTACAGTCCGTCTAGAAACAATGATCCTGCTACCTTAAATGTGTAGATTAACATGATTGTCTAATTTCGTTGCTTATATGTACTACATAAATGTTATTTTTAAGACAACGTTGAATTAACAGACAATATCCAAGATGTACGGAAACAATATGgggcaaaaaaaataaacaaatgtagCTTTGTAATTAATATTGGGCTTGTGCATCGATAAATGTGTTCCCTTGCAATGCAAACTGAATATCATTGCCATAGCATGTAAAATAGAAAGCTATTTGTAGGTTCGAATAAACGAACCAGACCCTCCTAATTTTCGACTTATCTTTGTAATGCAAATCCCAAAATTATGTAGTTATATCGTAGATACGTCGCCAGTTTTAATCGCTTGCTAACTAGTTAGCTATATCCAGGATTTGTTTATATTATTGAATATCATGGACAGGGAGTCTTACTATAACTGCTGCAGCCTTGTCAAAATACCAAGGCAATCCTATGAAAAATTCTGGTCTTCGCACTTTGTGGATTACATAGACAAGGAGTTGAGCTATTCCAAATTCTTTAAAAAGGTACTTACTTCCCAACCACCCATTCATGTTCTCGAGGAAATTCACTAGACTGGACATGCAGAAAACAGTGGATCACTGAAGAGGGGAAACCAACCTTCCAGAAACTGCTGCAGCAATTTGGTAAATAAATGTTGTTACAGATCTATTACAATGCCCAGTAACTTTGTATTCATAATGTTGGTGTGACATGAACGAGTTTGATTAGCCTAGGCATGGGCTGTCCTGATCTGTGATTTGACAGCCATATCTCATCGTCTGTGGAATTATCTGATATAATTTGTGCTGCAGTTATGATGAACAAATAACCCATTTCTAAGTTGTTTTCACAAAAGGTTTTTCTATTGTTTTTTACCCTTGCAGATTAGACTCTGGTTCCTGTTGCAAACAGTAATGTGAAAGAATACAATGCAAACCCCAAACAAATTATTTATTCACTACTGGAAAGAATACATCCAGAATGGACACACGTCACCAAAAGGATGTCTATCTGAACGATtctaaactatcaaaataaagaaagtcgcacactccatgtataatctcccagcaatttaatgggtatttaccaacgtttcggcatcaccctgaggaaggcacagtgatgccaaaacattggtaaatacccattaaattgctgggCGATTATACATGGAGTGTGCGACTTTATTTTGATAGCttattcgccgttagtcagcacctccacacaaactattattCTGGGTGGGCGCCAGCGcatgttttttaaaatcttttaTCTGAAGTATTGACACATGTCAAGGTATTGATTTCACTGATATGTTGCCTCAGTCCAAAAGAGCAGCAGTCCAAAAGATTTGAAAGTGTTTATTTGTAATGAATAGTACTTGTACTCTTTGCGTTCTTacgaaactatgcagtattttgtttttttatgtattatttcttacactgttaccacaggaaatcttaagtcttattacatacagccgggaggaactattggatataagagcaacgccAACTTACCAGGAACACGAcaggtctgttcaacactggtccaaccaatctgattccatgcttcaagattgcttcgatcacataTGTTCCGGATGGCATCGAACAACATTGAtctatacgctgattcgCAGGGATTTTCCTTAACGCGTTTATACCACCCCAGTCTTCTTTTCTTCTGACTGGTTCAATAAGTATTGGGATACCTTGGAGGTGGACGACTACCGCTAcgtctacatggaacccaaagacTCATGGTAtaacaaaacatatttcattatAGACCCTAATATGGATATCCTATTATCTCTCCCTTAACATCATGTGCTTGTTTCTCTCATCACTACAGGACGCCATTCCACACTGATGCGTTTCGCTCCTACAGCTTGTCAGTGAATATCTGTGGCAGTAAAAAATGTATCCTATATCCCAAGGAGCCAAGGGGCCAAGGAGAGTTTCTACAAGACAGCCATGGCAACCTTGCTTATGACATCACTACCCCCGAGCTTCAAGACAATGGGCAGTTCCCACACTCTGTTGAGGCCTGCCAACCACTAGAGATCATTCAGGAAGCGGGTCATCATGAAGTCTTGCTCTGGGATTGACTACAGGGAGTTTGCCTCTTTCCAAAAGATCATCGCTGACAACCGCATGTCTTTCTTGAGCTCTTGAAACACCTCAAATTACCCTCTGCATCTTTCAAATACCCTGACCACGTTAGGACCTCACCACGCTGCCTGTGACCTGCAGAGGATGGCTCACATTCTAGAATGCATGCTCTGCAATTACTTTAACTGGAACATTCAACTCTGAGCTCacacaacacccacccgtagatcgcactccagcaggtatatctcactggtcaccccaaagcctattcttcctttggccgcctttccttccagttctctgctgccaatgattggaacaaactgcaaaaa
>TU844382
TGAATATCATTGCCATAGCATGTAAAATAGAAAGCTATTTGTAGGTTCGAATAAACGAACCAGACCCTCCTAATTTTCGACTTATCTTTGTAATGCAAATCCCAAAATTATGTAGTTATATCGTAGATACGTCGCCAGTTTTAATCGCTTGCTAACTAGTTAGCTATATCCAGGATTTGTTTATATTATTGAATATCATGGACAGGGAGTCTTACTATAACTGCTGCAGCCTTGTCAAAATACCAAGGCAATCCTATGAAAAATTCTGGTCTTCGCACTTTGTGGATTACATAGACAAGGAGTTGAGCTATTCCAAATTCTTTAAAAAGGTACTTACTTCCCAACCACCCATTCATGTTCTCGAGGAAATTCACTAGACTGGACATGCAGAAAACAGTGGATCACTGAAGAGGGGAAACCAACCTTCCAGAAACTGCTGCAGCAATTTGGAGCCAAGGGGCCAAGGAGAGTTTCTACAAGACAGCCATGGCAACCTTGCTTATGACATCACTACCCCCGAGCTTCAAGACAATGGGCAGTTCCCACACTCTGTTGAGGCCTGCCAACCACTAGAGATCATTCAGGAAGCGGGTGAGATCATTTGTGTGCTCAGTGGTTGGCACCATCAGGTTTATAATTTGGTCATCATGAAGTCTTGCTCTGGGATTGACTACAGGGAGTTTGCCTCTTTCCAAAAGATCATCGCTGACAACCGCATGTCTTTCTTGAGCTCTTGAAACACCTCAAATTACCCTCTGCATCTTTCAAATACCCTGACCACGTTAGGACCTCACCACGCTGCCTGTGACCTGCAGAGGATGGCTCACATTCTAGAATGCATGCTCTGCAATTACTTTAACTGGAACATTCAACTCTGAGCTCacacaacacccacccgtagatcgcactccagcaggtatatctcactggtcaccccaaagcctattcttcctttggccgcctttccttccagttctctgctgccaatgattggaacaaactgcaaaaataactgaagctggagactcatatctccatcactagctttaagcaccagctgtcagagcagctccccatactgtatttatatattttcctcctttgcaccccagtatctctacttgcacattcatcttctgcacatctaccattccggTGTTTAATTGCTagattgtaattacttcgccaccatggccaatttattgccttacctcccttatcctacctcatttgcacacactgtatatatacttttactgtactattgactgtatttttgtttattccatgtgtaactgtgttgttgtatgtgtcaaactgctttatgttggccaggttgcagttgtaaatgagaacttgttcaactagcctacctggttaaataaaggtgaaatttaaaaaactgAAAGTTTTCTGGAGTAGATTAAAGAAACCAAACTCCACTAGAGGGCAGCACTCCCTTTACCAGGAGTAGGCCACTGTATCCCTTTCTGAGCATCTTTATCTATACATTTGGTTGATAAGGCTTTGGTTTCAGAGATAGGTAGCCCAAATGACTTGCCTGATGTCTTGAAATACATACGTTTATGGATGTTTTGTGTGAATGAGATGTTgagaaaatgagaaacatccaTACTTTGTGTCCTTATATGTTTATTACACCAGAGATGCATAGTAATATTTATGACAATAGCTAGTAAATTATGGTGCACAACTGGCAAACAGCATAGTTAAGGAAGATAGACTCTGAAATTATAATTTCAGAGTCTATCTAAAGCAATTTCAATATTGCAAACAAAGTAAAACTATTGTCAGACATGGCTGCTAGTGGTACCAGTGAAATACTGTATTAGATGAATTTGGAAAGAGAAGATGTAACTATGGACGTGTAGAAATCCATGAAGAAATTATATGGCTCTTTTGAACAAATGTACGTTTCATATTGTTGGGGTCAATAAATACTTCTATCCTCATTTTGCTTTCGTGTCTTTGGGCCACCAGTCTGGCACGGAGGCCTCTAGAGTCACTGTGGTGTCCTCTGACGCCTTGAGTGTCAGTGGCTCTTTAGCGTGAGCCAGGCGGATCAGGCTCAGGCCCAGCTCTCCAACCCCGGCCCTGTGCTTCCCGGCTGGCTTGCCAGACTGGGTCTGTAGCGATACTCCTTCCTCCAGGCCTTCGGCTGGTGCTGACATGCGTACAGGCATCAGGCGCTTCCGCACCACCCCGGTGTGATGAGTCCTGGCGGTCAACTCCTGGCCAATGTAACAGCCCTTACTGAAGCTGATGCCCTGCATGTAGACCAGGTTGGACTCCAGAGGAAGAGCCACCCCGGGAGGAAGGTCCTTCACCCCCTCA
>TU844383
TGAATATCATTGCCATAGCATGTAAAATAGAAAGCTATTTGTAGGTTCGAATAAACGAACCAGACCCTCCTAATTTTCGACTTATCTTTGTAATGCAAATCCCAAAATTATGTAGTTATATCGTAGATACGTCGCCAGTTTTAATCGCTTGCTAACTAGTTAGCTATATCCAGGATTTGTTTATATTATTGAATATCATGGACAGGGAGTCTTACTATAACTGCTGCAGCCTTGTCAAAATACCAAGGCAATCCTATGAAAAATTCTGGTCTTCGCACTTTGTGGATTACATAGACAAGGAGTTGAGCTATTCCAAATTCTTTAAAAAGGTACTTACTTCCCAACCACCCATTCATGTTCTCGAGGAAATTCACTAGACTGGACATGCAGAAAACAGTGGATCACTGAAGAGGGGAAACCAACCTTCCAGAAACTGCTGCAGCAATTTGGCCAAGGAGAGTTTCTACAAGACAGCCATGGCAACCTTGCTTATGACATCACTACCCCCGAGCTTCAAGACAATGGGCAGTTCCCACACTCTGTTGAGGCCTGCCAACCACTAGAGATCATTCAGGAAGCGGGTGAGATCATTTGTGTGCTCAGTGGTTGGCACCATCAGGTTTATAATTTGGTAAGTGCTGCTGTTTGGATGTGGTGCAAGAGCTTTTTTATAAATAATTGCCAGTTAAGCACATATAAGCTCATCTGGCTAATTTTGAACTGTAATAACCCCATTTTTGTCTCATAATCCTACAGGAAGACACCATCTCTAACAACCATAACTGGTTGAATGGCTGCAATGTGTACATTATGTGTCAGTTTCTTCAGAACGAGCTGTCTGCtgtccagagagagatagaggagtggAGTAACACTTGGAGATACTGTATGTCAAAAGCAGATTTATTTTGAAAAAGCTGTGGTCTGTAGTAACTAAATTGTTATTGTTTTCCAGGTCATCATGAAGTCTTGCTCTGGGATTGACTACAGGGAGTTTGCCTCTTTCCAAAAGATCATCGCTGACAACCGCATGTCTTTCTTGAGCTCTTGAAACACCTCAAATTACCCTCTGCATCTTTCAAATACCCTGACCACGTTAGGACCTCACCACGCTGCCTGTGACCTGCAGAGGATGGCTCACATTCTAGAATGCATGCTCTGCAATTACTTTAACTGGAACATTCAACTCTGAGCTCacacaacacccacccgtagatcgcactccagcaggtatatctcactggtcaccccaaagcctattcttcctttggccgcctttccttccagttctctgctgccaatgattggaacaaactgcaaaaataactgaagctggagactcatatctccatcactagctttaagcaccagctgtcagagcagctccccatactgtatttatatattttcctcctttgcaccccagtatctctacttgcacattcatcttctgcacatctaccattccggTGTTTAATTGCTagattgtaattacttcgccaccatggccaatttattgccttacctcccttatcctacctcatttgcacacactgtatatatacttttactgtactattgactgtatttttgtttattccatgtgtaactgtgttgttgtatgtgtcaaactgctttatgttggccaggttgcagttgtaaatgagaacttgttcaactagcctacctggttaaataaaggtgaaatttaaaaaactgAAAGTTTTCTGGAGTAGATTAAAGAAACCAAACTCCACTAGAGGGCAGCACTCCCTTTACCAGGAGTAGGCCACTGTATCCCTTTCTGAGCATCTTTATCTATACATTTGGTTGATAAGGCTTTGGTTTCAGAGATAGGTAGCCCAAATGACTTGCCTGATGTCTTGAAATACATACGTTTATGGATGTTTTGTGTGAATGAGATGTTgagaaaatgagaaacatccaTACTTTGTGTCCTTATATGTTTATTACACCAGAGATGCATAGTAATATTTATGACAATAGCTAGTAAATTATGGTGCACAACTGGCAAACAGCATAGTTAAGGAAGATAGACTCTGAAATTATAATTTCAGAGTCTATCTAAAGCAATTTCAATATTGCAAACAAAGTAAAACTATTGTCAGACATGGCTGCTAGTGGTACCAGTGAAATACTGTATTAGATGAATTTGGAAAGAGAAGATGTAACTATGGACGTGTAGAAATCCATGAAGAAATTATATGGCTCTTTTGAACAAATGTACGTTTCATATTGTTGGGGTCAATAAATACTTCTATCCTCATTTTGCTTTCGTGTCTTTGGGCCACCAGTCTGGCACGGAGGCCTCTAGAGTCACTGTGGTGTCCTCTGACGCCTTGAGTGTCAGTGGCTCTTTAGCGTGAGCCAGGCGGATCAGGCTCAGGCCCAGCTCTCCAACCCCGGCCCTGTGCTTCCCGGCTGGCTTGCCAGACTGGGTCTGTAGCGATACTCCTTCCTCCAGGCCTTCGGCTGGTGCTGACATGCGTACAGGCATCAGGCGCTTCCGCACCACCCCGGTGTGATGAGTCCTGGCGGTCAACTCCTGGCCAATGTAACAGCCCTTACTGAAGCTGATGCCCTGCATGTAGACCAGGTTGGACTCCAGAGGAAGAGCCACCCCGGGAGGAAGGTCCTTCACCCCCTCA

Function

symbol description
iba57 Acts upstream of or within heme biosynthetic process. Is expressed in intermediate cell mass of mesoderm. Human ortholog(s) of this gene implicated in hereditary spastic paraplegia 74 and multiple mitochondrial dysfunctions syndrome 3. Orthologous to human IBA57 (iron-sulfur cluster assembly factor IBA57).

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986150.1 False 2477 mRNA 0.40 4 72097392 72102520
XR_005052944.1 False 2519 mRNA 0.40 3 72097392 72102520
TU844382 False 2355 lncRNA 0.44 3 72097645 72103866
TU844383 True 2669 lncRNA 0.43 2 72097645 72103866

Neighbor

gene id symbol gene type direction distance location
wnt9a wnt9a coding upstream 163531 71907559 ~ 71934937 (+)
c8h1orf35 cssa14h1orf35 coding upstream 264836 71828037 ~ 71832556 (+)
LOC110530483 obscn coding upstream 279271 71727788 ~ 71818121 (+)
atg9b LOC106569346 coding upstream 415094 71659108 ~ 71682417 (+)
asic1c LOC106569349 coding upstream 457137 71480964 ~ 71640255 (+)
LOC110530494 LOC106569334 coding downstream 43833 72146353 ~ 72155430 (+)
LOC110529137 LOC106569331 coding downstream 88647 72191167 ~ 72219447 (+)
LOC110530496 LOC100136504 coding downstream 238976 72341496 ~ 72345654 (+)
LOC110530498 LOC106569327 coding downstream 391525 72494045 ~ 72496970 (+)
LOC118965654 NA coding downstream 398789 72501309 ~ 72501364 (+)
G743787 NA non-coding upstream 16257 72080737 ~ 72081135 (+)
G743779 NA non-coding upstream 17599 72069953 ~ 72079793 (+)
G743745 NA non-coding upstream 20529 72030412 ~ 72076863 (+)
G743718 NA non-coding upstream 81548 72011141 ~ 72015844 (+)
G743688 NA non-coding upstream 110855 71986323 ~ 71986537 (+)
G743791 NA non-coding downstream 36459 72138979 ~ 72139484 (+)
G743813 NA non-coding downstream 37811 72140331 ~ 72140976 (+)
G743815 NA non-coding downstream 41063 72143583 ~ 72143878 (+)
G743818 NA non-coding downstream 44355 72146875 ~ 72147090 (+)
G742860 NA other upstream 381776 71695602 ~ 71715616 (+)
G742095 NA other upstream 1470648 70626221 ~ 70626744 (+)
G740827 ripk1 other upstream 2559116 69536400 ~ 69538276 (+)
G739708 NA other upstream 3092276 69004337 ~ 69005116 (+)
G739670 NA other upstream 3190427 68903365 ~ 68906965 (+)
LOC110530976 LOC106569323 other downstream 440206 72542055 ~ 72555556 (+)
LOC110530502 LOC106569321 other downstream 532364 72634238 ~ 72714065 (+)
LOC110530507 LOC106569317 other downstream 757888 72779485 ~ 72872336 (+)
G744696 NA other downstream 759736 72862256 ~ 72864703 (+)
G744697 NA other downstream 764581 72867101 ~ 72868382 (+)

Expression


Co-expression Network