Gene
RNA
| Item | Value |
|---|---|
| gene id | prdx1 |
| gene name | nkef |
| gene type | coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048572.1 |
| NCBI id | CM023226.2 |
| chromosome length | 91622588 |
| location | 73974656 ~ 73981179 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| peroxiredoxin |
| id | name | namespace |
|---|---|---|
| GO:0055114 | oxidation-reduction process | biological_process |
| GO:0005737 | cytoplasm | cellular_component |
| GO:0004601 | peroxidase activity | molecular_function |
| GO:0051920 | peroxiredoxin activity | molecular_function |
| id | description |
|---|---|
| K13279 | PRDX1; peroxiredoxin 1 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| NM_001124277.1 | True | 1110 | mRNA | 0.48 | 6 | 73974656 | 73981179 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110530543 | gpbl1 | coding | upstream | 23449 | 73940094 ~ 73951207 (+) |
| LOC110530541 | ipp | coding | upstream | 43159 | 73924309 ~ 73931497 (+) |
| LOC110530540 | LOC106569403 | coding | upstream | 56658 | 73909778 ~ 73917998 (+) |
| LOC110530535 | LOC106569400 | coding | upstream | 112450 | 73844648 ~ 73862206 (+) |
| LOC110530534 | LOC106569406 | coding | upstream | 137281 | 73834830 ~ 73837375 (+) |
| zte38 | LOC106569397 | coding | downstream | 1529 | 73982708 ~ 73991211 (+) |
| LOC110530564 | LOC106569383 | coding | downstream | 246932 | 74228111 ~ 74230113 (+) |
| LOC110530563 | LOC106569381 | coding | downstream | 263222 | 74244401 ~ 74247287 (+) |
| LOC118965552 | NA | coding | downstream | 294147 | 74275326 ~ 74279768 (+) |
| si:dkeyp-66d1.7 | LOC106569375 | coding | downstream | 386958 | 74368137 ~ 74376776 (+) |
| G745604 | NA | non-coding | upstream | 8227 | 73966203 ~ 73966429 (+) |
| G745602 | NA | non-coding | upstream | 9711 | 73964663 ~ 73964945 (+) |
| G745601 | NA | non-coding | upstream | 10025 | 73964405 ~ 73964631 (+) |
| G745600 | NA | non-coding | upstream | 10429 | 73964010 ~ 73964227 (+) |
| G745597 | NA | non-coding | upstream | 29362 | 73945028 ~ 73945294 (+) |
| G745609 | NA | non-coding | downstream | 626 | 73981805 ~ 73982592 (+) |
| G745617 | NA | non-coding | downstream | 7298 | 73988477 ~ 73988676 (+) |
| G745612 | LOC106569395 | non-coding | downstream | 24451 | 74005630 ~ 74005982 (+) |
| G745623 | NA | non-coding | downstream | 34711 | 74015890 ~ 74016434 (+) |
| G745489 | NA | other | upstream | 254006 | 73719716 ~ 73720650 (+) |
| G745410 | LOC106569417 | other | upstream | 379418 | 73593637 ~ 73595238 (+) |
| G745083 | NA | other | upstream | 724160 | 73249424 ~ 73250496 (+) |
| G744697 | NA | other | upstream | 1106274 | 72867101 ~ 72868382 (+) |
| G744696 | NA | other | upstream | 1109953 | 72862256 ~ 72864703 (+) |
| G746052 | NA | other | downstream | 971506 | 74952685 ~ 74953842 (+) |
| nedd8 | nedd8 | other | downstream | 1033465 | 75014644 ~ 75033896 (+) |
| G746936 | NA | other | downstream | 1346593 | 75327772 ~ 75328195 (+) |
| LOC110530987 | LOC106569478 | other | downstream | 1369029 | 75151419 ~ 75357954 (+) |
| G746951 | LOC106591969 | other | downstream | 1398323 | 75379450 ~ 75383243 (+) |
