Item | Value |
---|---|
gene id | LOC110530567 |
gene name | LOC106569378 |
gene type | coding |
species | rainbow trout (Oncorhynchus mykiss) |
category of species | economic fish |
Item | Value |
---|---|
chromosome id | NC_048572.1 |
NCBI id | CM023226.2 |
chromosome length | 91622588 |
location | 74301947 ~ 74317772 (-) |
genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
RNA id | representative | length | rna type | GC content | exon number | start site | end site |
---|---|---|---|---|---|---|---|
XM_036986213.1 | False | 2862 | mRNA | 0.46 | 17 | 74301947 | 74309447 |
XM_021613757.2 | False | 3295 | mRNA | 0.46 | 17 | 74301947 | 74310854 |
XM_021613758.2 | False | 3201 | mRNA | 0.46 | 17 | 74301947 | 74310862 |
XM_036986214.1 | False | 3388 | mRNA | 0.46 | 17 | 74301947 | 74310869 |
XM_036986211.1 | False | 4469 | mRNA | 0.46 | 17 | 74301947 | 74315894 |
XM_036986212.1 | True | 3140 | mRNA | 0.47 | 18 | 74301947 | 74317772 |
gene id | symbol | gene type | direction | distance | location |
---|---|---|---|---|---|
LOC110530566 | LOC106569379 | coding | downstream | 5365 | 74282781 ~ 74296582 (-) |
LOC110530565 | LOC106569423 | coding | downstream | 21104 | 74274710 ~ 74280843 (-) |
LOC110530562 | LOC106569380 | coding | downstream | 40758 | 74245924 ~ 74261189 (-) |
tep1 | tep1 | coding | downstream | 73432 | 74203323 ~ 74228515 (-) |
LOC110530551 | LOC106569394 | coding | downstream | 98937 | 74197676 ~ 74203010 (-) |
LOC110530568 | copa | coding | upstream | 3558 | 74321330 ~ 74338406 (-) |
LOC110530569 | LOC106569376 | coding | upstream | 28436 | 74346208 ~ 74351147 (-) |
nfatc4 | nfatc4 | coding | upstream | 78588 | 74396360 ~ 74403787 (-) |
LOC110530578 | NA | coding | upstream | 104606 | 74422378 ~ 74423773 (-) |
LOC110530579 | NA | coding | upstream | 108365 | 74426137 ~ 74427397 (-) |
G746501 | NA | non-coding | downstream | 3346 | 74250884 ~ 74298601 (-) |
G746508 | NA | non-coding | downstream | 21696 | 74279778 ~ 74280251 (-) |
G746476 | NA | non-coding | downstream | 142967 | 74158421 ~ 74158980 (-) |
LOC110530560 | NA | non-coding | downstream | 213266 | 74087282 ~ 74088689 (-) |
G746397 | NA | non-coding | downstream | 270388 | 74031286 ~ 74031559 (-) |
G746522 | NA | non-coding | upstream | 43427 | 74361199 ~ 74361505 (-) |
G746523 | NA | non-coding | upstream | 44347 | 74362119 ~ 74362385 (-) |
G746524 | NA | non-coding | upstream | 45094 | 74362866 ~ 74363113 (-) |
G746571 | NA | non-coding | upstream | 161670 | 74479442 ~ 74479681 (-) |
LOC110530984 | NA | other | downstream | 357517 | 73939248 ~ 73944430 (-) |
G745292 | c8 | other | downstream | 910514 | 73385652 ~ 73391433 (-) |
G745300 | NA | other | downstream | 920246 | 73381301 ~ 73381701 (-) |
G744608 | NA | other | downstream | 1581480 | 72695048 ~ 72720467 (-) |
G744129 | NA | other | downstream | 1976955 | 72324192 ~ 72324992 (-) |
G746434 | NA | other | upstream | 24857 | 74342629 ~ 74359974 (-) |
G746730 | NA | other | upstream | 521959 | 74839731 ~ 74840090 (-) |
G747266 | NA | other | upstream | 1044970 | 75362742 ~ 75363491 (-) |
G747337 | NA | other | upstream | 1147308 | 75465080 ~ 75465616 (-) |
LOC118965558 | NA | other | upstream | 1209663 | 75527435 ~ 75535384 (-) |