XLOC_025883


Basic Information

Item Value
gene id XLOC_025883
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 60861247 ~ 60862752 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052848
tgtgtatgtctgtgtgtatacatgtatgtaagtatgtgtgtgtgtgtgtgttagtttgggAAACTGATTCACTGAGTGTCAAACAGACACTGCAGTGgtgttttttaatgtgtgtttccgtttgtgtgtatgtttgtgtccatgtatatgtgtgtatttatgtaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttagtttgggAAATTGATTCACTGCGTGTCAAACATACACACTGCAgtggtgtgttttgtgtgtgtttccgcgtgtgtgtatttatgtgagggtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgttagtttaGGAAATTGATTTACTGATTGTCAAACAGACACACTGCAGtggagtgttttgtgtgtgtttccgtgtatgtaagtatgtgtgtgtgttagtttgggAAACTGATTCAGTGTTAAACAGACACACTGCAgtggtgtgtttctgtgtgtttgtgtttatgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagagtgtttgggAAACTGTAAATATGTTTCAGCATTAGCGAGGGACTGATTGAGTGTCAAACAGACACACTGCAGTGATGTGTTTTGCTAAACGAAGGCCAGAACTGTGGTTTACTCGGGCTGCGGGCTGCTGGAGCCCCAGGAAAAGAGACTGGGAAGGCGGAAGGCAGAGTCTCTGCGTGCCGGGTCGGGAAGAGTCAGGGTCTCTGGAGCGGACTTCTTCCTCGGTCTGTCTTTGGGCACGGATAGGAAGTCTGGAGCTTCGGTGGAGAGCGGTGTGGAGGGCGCGCTGGACGGCCCGCTGCGGGCACAGGCTGGCAGCGGCGTCTCGCTGATGGCAATGGCTGGGGGAAATGTCCCCAACTTCTTATTGGTGGCTTCCTGAGTGGCTCGCTCATATTCCCTCACCTCCTCCATCGTCat

Function

GO: NA

KEGG:

id description
ko03230 Viral genome structure
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052848 True 971 lncRNA 0.48 2 60861247 60862752

Neighbor

gene id symbol gene type direction distance location
XLOC_025882 CABZ01087514.1 coding upstream 20053 60828813 ~ 60841194 (+)
XLOC_025881 NA coding upstream 62375 60797423 ~ 60798872 (+)
XLOC_025880 tsen54 coding upstream 65416 60761811 ~ 60795831 (+)
XLOC_025879 foxj1a coding upstream 127525 60716904 ~ 60733722 (+)
XLOC_025878 NA coding upstream 176277 60677234 ~ 60684970 (+)
XLOC_025884 helz coding downstream 94760 60957512 ~ 61034549 (+)
XLOC_025885 NA coding downstream 176321 61039073 ~ 61041115 (+)
XLOC_025886 CR352263.1 coding downstream 322908 61185660 ~ 61187105 (+)
XLOC_025887 lmtk2 coding downstream 358442 61221194 ~ 61288774 (+)
XLOC_025888 NA coding downstream 475787 61338539 ~ 61352006 (+)
XLOC_025429 BX649540.1 misc upstream 30612211 30248739 ~ 30249036 (+)
XLOC_025877 CABZ01068050.1 non-coding upstream 213013 60646736 ~ 60648234 (+)
XLOC_025874 NA non-coding upstream 317108 60543113 ~ 60544139 (+)
XLOC_025873 NA non-coding upstream 421669 60438114 ~ 60439578 (+)
XLOC_025889 NA non-coding downstream 477941 61340693 ~ 61343708 (+)
XLOC_025890 NA non-coding downstream 494453 61357205 ~ 61384192 (+)
XLOC_025891 NA non-coding downstream 505737 61368489 ~ 61377055 (+)

Expression


Co-expression Network