ltb4r2b (LOC106569372)


Basic Information

Item Value
gene id ltb4r2b
gene name LOC106569372
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74408385 ~ 74413205 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613764.2
TGGGGCAGCACATTTATTAGACACAGTAACAGGGAAAGACAGGGGAAACAAGCAGttgtaaagaaaaaaatagaatgagagagggagttgGATACAAGCTGTCAGAaaagagagataaacaaagagtATAGATAAACACAAAACTATTGCCACCATATGGTTACACACCCTACTCAGATCCATTGCTCTTCATCACCTTCTTCGCCATCCTCTGAAGTCTTGATTGTGTAGTAAGAGCTGATAACCCTCACTATGGCTAAGGATGGCAGTTCCCTCCTCCATTATCTCAACAAGTCCACTTCCACCTCTATCCTCTTCACCAAAGACACTGTTGAGGATTCCAGCATCGTGAGTAATGACGCCACCACAGCCATAGGAGCCCTCATCTTGGGCCTGGTCTTCCTCCTCGGCGTCCCAGGAAACCTCTTCATCATTTGGAGCATCCTGGCCCGTGCCCGCCAACGCTCCGTTACCACCCTCCTCATCCTCAACCTCGCGTGCGCCGATGGCTTTCTCATGTGCCTTACCATCTTCTTCCTAATTTATCTGGCCAGGCAGAACTGGGACTTTGGCGACCTCATGTGCAAAGGACTGTTTTACCTGTGCAACACTAACATGTACGCCTCCATCTTCCTCATCACGCTGATGAGCCTGCACAGGCTAGTTGCAGTGGTGTGGCCCCATCGAGTGGCGGCCCTGGCCAGCAAGAAGATGGTGGTGCGGGCAATAGCTGTGCTCTGGGCCCTAGTGTTCTCAATTTCTATCCCTGCTCTGGTGTTCAGGCAGGTGAGGTATGATCATGATGAACAGAACAACACCCGCCTGGTGTGTGCCTCAAATCACTCCCGGTCTCGATATGTGGTGTACCAGTACACCTTTGAGACAGTAGTGGGATTCCTGGTTCCGTACGGGGTTATAGTGAACAGCTACGTCTGCATCCTGAGACGCCTCAGACAGACCAAGTTCCGTCGTAAGGTCCGCAGTGAGAAACTCATCCTGGCCATCGTTGTGATGTTTGGCATCTTCTGGTTGCCATATCACCTCATTAACATAATACAGGTGGTGGCTGAACAGTTTGATGACAGCTCACCAACAAAAAAGAGaCTAGATATGGTATGGCAGCCCAGTCGTGCCGTGACCTCCGCTCTGGCCTTCATCAGCAGCTGTGCTAACCCTATACTCTACACCTTTGCTGGAAAATCCTACATCAAAGAGGACGGCATTGCCTTCATGGCTCGGCTCTTTGAGGGGACATCTCTGGACACTGGGATAAAGAAGGGAATTGGACTAAAAGATGCGTTGTCTTTCAGCAGCACTGGGGGCAATGCTGTGAAGAACGAAAAACAGACACTTGTGTAGAGTTGCACTGCAGATGCTATCCACTCATCATGACGATGCACTGCTGCACACAGACTGCTTCGAAACCTTTACCTGTCCAAATGGGACCATCTGAAAGAATCCCTACAATATTCAGTGCACCTTGTGTTAGACAAGTTTCTCAGTAGACCCAAATTCACTGCCACTAATCTTTGTAAATGCGTTTTGTaaatgtgcccccccccaaaaattaaaatactttTAATATACACTGCTTGTACTGCTTGAATGTTTGTTGCATCCCATGTTGTAAATACCACTTATAATACTGTGGAATATTGTGATTAAAATAAG
>TU846625
AGTAACAGGGAAAGACAGGGGAAACAAGCAGttgtaaagaaaaaaatagaatgagagagggagttgGATACAAGCTGTCAGAaaagagagataaacaaagagtATAGATAAACACAAAACTATTGCCACCATATGGTTACACACCCTACTCAGATCCATTGCTCTTCATCACCTTCTTCGCCATCCTCTGAAGTCTTGATTGTGTAGTAAGAGCTGATAACCCTCACTATGGCTAAGGATGGCAGTTCCCTCCTCCATTATCTCAACAAGTCCACTTCCACCTCTATCCTCTTCACCAAAGACACTGTTGAGGATTCCA

Function

NR:

description
leukotriene B4 receptor 1-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613764.2 False 1671 mRNA 0.48 5 74408385 74413205
TU846625 True 319 lncRNA 0.42 2 74408409 74411331

Neighbor

gene id symbol gene type direction distance location
ftr66 LOC106569374 coding upstream 25387 74376847 ~ 74382998 (+)
si:dkeyp-66d1.7 LOC106569375 coding upstream 31609 74368137 ~ 74376776 (+)
LOC118965552 NA coding upstream 128617 74275326 ~ 74279768 (+)
LOC110530563 LOC106569381 coding upstream 161098 74244401 ~ 74247287 (+)
LOC110530564 LOC106569383 coding upstream 178272 74228111 ~ 74230113 (+)
sdr39u1 sdr39u1 coding downstream 11242 74424447 ~ 74428142 (+)
parp2 parp2 coding downstream 18539 74431744 ~ 74438581 (+)
LOC110530582 LOC106569368 coding downstream 67302 74480507 ~ 74501122 (+)
LOC110530584 LOC106569421 coding downstream 117469 74530674 ~ 74534017 (+)
LOC110530591 LOC100196652 coding downstream 284144 74697349 ~ 74712803 (+)
G745826 NA non-coding upstream 28724 74379006 ~ 74379661 (+)
G745821 NA non-coding upstream 45704 74362439 ~ 74362681 (+)
G745810 NA non-coding upstream 60645 74344903 ~ 74347740 (+)
G745764 copa non-coding upstream 82484 74322703 ~ 74325901 (+)
G745804 NA non-coding upstream 88697 74319445 ~ 74319688 (+)
G745873 NA non-coding downstream 66195 74479400 ~ 74480069 (+)
G745763 NA non-coding downstream 88266 74501471 ~ 74502888 (+)
G745766 NA non-coding downstream 89781 74502986 ~ 74503510 (+)
G745880 NA non-coding downstream 91550 74504755 ~ 74505021 (+)
G745884 LOC100136012 non-coding downstream 96211 74509416 ~ 74509726 (+)
G745489 NA other upstream 687735 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 813147 73593637 ~ 73595238 (+)
G745083 NA other upstream 1157889 73249424 ~ 73250496 (+)
G744697 NA other upstream 1540003 72867101 ~ 72868382 (+)
G744696 NA other upstream 1543682 72862256 ~ 72864703 (+)
G746052 NA other downstream 539480 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 601439 75014644 ~ 75033896 (+)
G746936 NA other downstream 914567 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 937003 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 966297 75379450 ~ 75383243 (+)

Expression


Co-expression Network