LOC110530584 (LOC106569421)


Basic Information

Item Value
gene id LOC110530584
gene name LOC106569421
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 74530674 ~ 74534017 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613779.2
TGCACCCCTTTGGGTCCAtaggaccaggattgagaaccactggtctagactaATAGTTTCCTTCTTGTAAATACACAAGGGCAAACGAGGAACTGAATTTCTGAATTCAtacttacatacagtattattCCATTGCGTGGTAACACACCTTTACCGGTAATCCACGCCCTGCCTCCTTCCACATGAACATGTAGATAAGGAGTAAAAAACATATTACAGAATTTAGAAAGTATTAATCCCGCTGAGACAGTGTATTGACTAAAGGATAAGCTTACTAAATACAGGACCAAGAATGGACAGAGGACTTCTCTTTGTGGCCTCTGTGGTGATGGGCTGCCTGGCACCAGGTGTTAGTGGAAACGGACATCTCTCGTTTGCCAATAATACGGAGGTGCATATCACACGGACAGGCTGTGGATTGACTAAGCTGTGTGTAGAGACCCCAGAACAATGTGATCCTACAGGAAAAACAAGCTGCCTCTTCGCTTCCATCGTCACCACCGCCCCCTCTCCTCCTAATGGAGTAGACCTGTTAGTTGAGCTCCTTGGGAACTCCAGTGGATACATCGCTCTAGGACTGACTGCCAACGAGACAGAgGGAACGTCTATGGTTTTTATCTGTGCCCAGAACAGAAATGGCAGTTTCTTCTTCCGCTCTGCCCAGCGCAACAACCTCAACAACACAATTTCTCTGACACAAAGGATTGTGAAAAACATCACTGGCTCAGTCAATGGGACTTTCATACAGTGTAAATTCATGCTGCCAGCGGTTAATGCAACAACCAGGACAAGTCACGTCACCACCTTCGTCACCTTCCTCGCTGTGGGAAATGTCATAAACGGTATGGGTATTGGTGACATCAACATACACTTGACCAATAAGCCATTGAACCTGGCTGACCCTACCAGCAACGTTGcaacaacagcagtcccaacaacAGCCGGCAGCAGCGCACTCACATCCCAAGCTGTGATGGTCCTGCTCAGTGTGCTGATGTATCGTCTTTCCTGAAGAGAACCTGAACGTTAGCCAGCTTCAACACCAATGGAAAGAGAACCCTTTTACCCTAAATATTTGAAGGAAAATTGACTCCGTATCTCAGATGAATTACTGTTACGTGCAATGAAATGCTACTGTTAATGTGGGATCTTGGTAACTTTAAATGTGTGTGAAAGGGAACAATTAGAATGTACGTATGCTACAGTAAAAGGAATTAATTGGTT

Function

NR:

description
putative ferric-chelate reductase 1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613779.2 True 1224 mRNA 0.45 7 74530674 74534017

Neighbor

gene id symbol gene type direction distance location
LOC110530582 LOC106569368 coding upstream 29552 74480507 ~ 74501122 (+)
parp2 parp2 coding upstream 92093 74431744 ~ 74438581 (+)
sdr39u1 sdr39u1 coding upstream 102532 74424447 ~ 74428142 (+)
ltb4r2b LOC106569372 coding upstream 117469 74408385 ~ 74413205 (+)
ftr66 LOC106569374 coding upstream 147676 74376847 ~ 74382998 (+)
LOC110530591 LOC100196652 coding downstream 163332 74697349 ~ 74712803 (+)
LOC110530590 LOC106569450 coding downstream 179073 74713090 ~ 74717411 (+)
LOC110530985 NA coding downstream 261399 74795416 ~ 74796285 (+)
LOC110530598 LOC106569444 coding downstream 270684 74804701 ~ 74813438 (+)
LOC110530599 LOC106569443 coding downstream 288477 74822494 ~ 74843597 (+)
G745899 NA non-coding upstream 886 74529563 ~ 74529788 (+)
G745898 NA non-coding upstream 1325 74529117 ~ 74529349 (+)
G745893 NA non-coding upstream 7510 74522964 ~ 74523164 (+)
G745892 NA non-coding upstream 8261 74522192 ~ 74522413 (+)
G745884 LOC100136012 non-coding upstream 20948 74509416 ~ 74509726 (+)
G745760 NA non-coding downstream 8822 74542839 ~ 74549712 (+)
G745770 LOC100653464 non-coding downstream 94774 74628791 ~ 74643321 (+)
G745907 NA non-coding downstream 145313 74679330 ~ 74679543 (+)
G745908 NA non-coding downstream 146320 74680337 ~ 74680554 (+)
G745910 NA non-coding downstream 147878 74681895 ~ 74682190 (+)
G745489 NA other upstream 810024 73719716 ~ 73720650 (+)
G745410 LOC106569417 other upstream 935436 73593637 ~ 73595238 (+)
G745083 NA other upstream 1280178 73249424 ~ 73250496 (+)
G744697 NA other upstream 1662292 72867101 ~ 72868382 (+)
G744696 NA other upstream 1665971 72862256 ~ 72864703 (+)
G746052 NA other downstream 418668 74952685 ~ 74953842 (+)
nedd8 nedd8 other downstream 480627 75014644 ~ 75033896 (+)
G746936 NA other downstream 793755 75327772 ~ 75328195 (+)
LOC110530987 LOC106569478 other downstream 816191 75151419 ~ 75357954 (+)
G746951 LOC106591969 other downstream 845485 75379450 ~ 75383243 (+)

Expression


Co-expression Network