XLOC_025890


Basic Information

Item Value
gene id XLOC_025890
gene name NA
gene type non-coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 61357205 ~ 61384192 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00052852
GAGTTTAATAGTGTGATGTGCAGTACTCCCCTCTGTATAAAGTTTACACAATGCTATAGGTCTCCAGCTCTGATGTGTTATggtatgttttaaatgacagtgagacatgctaaaattacaaatatttttattgtaaactaTACATTATAACCgagtacacagtaaaataatcTTTACTGAATGGCCAGCCTATTGGCAGCGAACAGTCTTTAAGCTTAAATAGGccagacatgttttttttaatcaacattaAAACTAATTATCTATTTACACCTTTTTTAGCCCTGATAAAAATTTTTTAGTTGTACTCTATTTTTGAGTCATGCTgtaatcttacatcaacaacacatggcacgCAATGCCTTGATAATAACAGATAAtcatattacattacaaacaacccaacaagTTGTTTAGCACACGTGCATCGCTGCTGtaatgtttacacatgtaatattttttcctgaggcgatttaaagcaaaacacacaatggcactcaatcaaacatatctacaatgataaggaacgtATTTATTTACTGAGTTATTAaagcacagcaataccacatgaagaaaggacagactttgaaggaataaactaTGTGAGGAGAGATCCactatagtgcactggacaagtctaaaCAAGTTCCACCCACCCATGCgtgaggcaggcagttctgtacaactACCTAACTTATCgtcttaaagatatcggcctaatttagacttCGGATCAATAACGATAATCTTGAAAAAAAGCATTTATCGTCCGATAAATATGGCCTATGATATATTATGCATCCCtacattatataaaaattatCCTAGAtgcataaaacaacaaataaagccGAGGCATCTTACACGATAAAAAACATTGCTGTTTAGAGTGCCATTTTTCAGTGGATGAGCGATGCTTGTGGTCCAACATCACTGTTGAACTCTGAATATCCAATCTACACCCACCGATCCTGATTGCAGATGGGTTTTTTAAATTTGATCCTTCTGGTCTACTAACCCAAGATTATCTAAAAACGCTGATCTTGATCATGACGTGCAACTGAGTGTCTGTGCATCAATAGACTCAAGTGAGTGATAATGCGACAACTGTGAAAGACAAGAAGAGAGAACTTTTATGGCATTGCCTGGCATGGCATGGCACACTTGAAAGGTAAGTTCTGGTAAGGTCTTGCATCAATTCAATCTCATCTATTATTACAGCTATAGTAACCGCTCCAATATTCTAATAGACTGGTGCTGATCCTGATGACCATATCATTACAGACCAATTGCTCAATCTCTTACTCTGTTCACTGATAATTCCCAAGTCAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCACTGGAGAAAACATTTTGCTGCATTGATGTCATTTGTGcagcttttctccagtgtggatgttcatgtgtttcttaagctgctcTGGGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttCTCAGGGTTCCTAAAAGACTAAACCTCTTGCTACACTGTAAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGAGAACCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgaattctctcgTGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCttacactcaaagcacatatactgTCTAACAGCAGTGTGGGACGTCTGATGCCTTTTTAATTTGGACTCCAATGTaaaactcttttcacacacaGGACATGAATAAGGCTTCTCACTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGGCCTCAGAAATGTTTTGCTGCAGTGATCACATTTgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccagtgtggatcatcatgtgttgattaagggataaTAGTTGggagaaactcttcccacactgagtacatgtgtgtggtttctctccagtgtggatcctcatgtgtctatTGCGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGATgagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccagtgtggatcctcatgtgttgattaagggatgatgataggCTAAAACTCGCCCCACACTGAGAACATATGAATGGTTTCACTCCCGTGTGAATCGTCATGTGTTTATTGAAGCTCGATAcgtgtctgaaactcttcccacactgagtacaggtgaatggtttctctccagtgtggatcatcatgtgataattaaggtgtgatgagtctctgaaactcttcccacactgagtacatgtgaatggtttctctccagtgtggatcatcatgtgtttgtTAAAGGTTGATGAGTCTCAGAAACTTGTttcacactgagtacatgtgaatggtctctctccagtgtggatcctcatgtgttgattaaggtgtgatgagtgtttgaaactctttccacactgagtgcatgtgaatggtctctctcctgtgtggatcctcatgtgtaaaTTAAGGCTTGATGAGTATcggaaactctttccacactgagtacaCTTGattggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTtctgaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCTCAGCTTCAACATGACGTTTCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGAA
>TCONS_00052853
GTGAGGAGAGATCCactatagtgcactggacaagtctaaaCAAGTTCCACCCACCCATGCgtgaggcaggcagttctgtacaactACCTAACTTATCgtcttaaagatatcggcctaatttagacttCGGATCAATAACGATAATCTTGAAAAAAAGCATTTATCGTCCGATAAATATGGCCTATGATATATTATGCATCCCtacattatataaaaattatCCTAGAtgcataaaacaacaaataaagccGAGGCATCTTACACGATAAAAAACATTGCTGTTTAGAGTGCCATTTTTCAGTGGATGAGCGATGCTTGTGGTCCAACATCACTGTTGAACTCTGAATATCCAATCTACACCCACCGATCCTGATTGCAGATGGGTTTTTTAAATTTGATCCTTCTGGTCTACTAACCCAAGATTATCTAAAAACGCTGATCTTGATCATGACGTGCAACTGAGTGTCTGTGCATCAATAGACTCAAGTGAGTGATAATGCGACAACTGTGAAAGACAAGAAGAGAGGTAAGAAGAaaacataatattgtaataatcacataaataataataatgaaaacaaattcTCAGTGTACTAAAGATGTATAATGACCTAATATTTGCTTATATTCATGTGTAACATAATTTTTTCGTATTACAGAACTTTTATGGCATTGCCTGGCATGGCATGGCACACTTGAAAGGTAAGTTCTGGTAAGGTCTTGCATCAATTCAATCTCATCTATTATTACAGCTATAGTAACCGCTCCAATATTCTAATAGACTGGTGCTGATCCTGATGACCATATCATTACAGACCAATTGCTCAATCTCTTACTCTGTTCACTGATAATTCCCAAGTCAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCCCTGGAGAGAACGTTTTGCTGCATTGGCTTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTTAGGGTTCCTAAATGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGGGATCCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgattcCTCTCATGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCAATGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGgcctcaaaaatgttttgctgcagtgatcacatttgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccggtgtggatcatcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTACGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGACAagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccggtgtggatcctcatgtgctgTTTAAGGGATGATTGTTGGCTGAAACTGGCCCCACACTGAGAACATATGAATGGTTTtgctccagtgtgaatcatcatgtgttgattaagctgtgatgattggctgaaactcttcccacactgagtacatgtgaatggcttctctccggtgtggatcctcatgtgttgtttAAGTTGTGATGAGTCTCtgaaattcttcccacactgagtacatgtgaatggtttctcatCAGTGTGGATCgtcatgtgtttattaaaggTTGATGAGTCTCtaaagctcttcccacactgagtacacgAGAATGgtctttctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGGTCTGATGAGTGTaaaaaaactctttccacaccgagtgcatgtgaagggtttctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATtggaaactctttccacactgagtacacttgaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGaaacaaagtttattttttagtaagtcaataaaaaataaatgtaggaTGAAAATTTGAAGTGTAAAGACTCTGTAAACACTGGC
>TCONS_00052854
tgcttatttaaaaaaaatattttctttgaatTAAAAGGTAAggcattcattttcattcatggaaacaattaaataataggGCAAATGTAACTCTACTCCAGTGTAGCAAATGCAATTTACTTACAGACACAGCGTAATATGATTTAGAAACTGCAATCGACTCCTTATTGCTGAtcaaaatgaacacatttaatgcaaaactaaatccatttctccactgattatttaAACCAGCAGGAACAAATAGTTTCTTGTGTTTTAATGAACACGACACAGTTTGAATtgtgaataaatgaagaataattgACAGGCAGAGTAAAGGGAAGTGCTGAggtgaacatgaatttaaccatgtgAATATTCATCTGTTCTTTACATTGAACGACTTCAGAACATTTGAGATATAGTAGGTCTACATGAAAAAACTTTCTGTTGCCTTATAATAGGCTGCCTTCATGGCTTATAAACACAGAATATCGATACCCAATCCAGCAAAAATGTGTGTTAACGAACAGATATctgattaaaatattttgatcAGTGCATCCCTATATGAAGGGGCAGAAAACAGTCAGTGGAGATTAAGAATAAATACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTACATTTTGTGCTGAtgatacacaattttatatttccATAAGACctagaattaaatttttttatcatattGGTCATTCATAACTTTGTTCAAGTTAAATGAACAGAAGCCCACCACTGGGTGTGTTTTGTCTAAAGCTCAGTCTTTTACTCTGTTCACTGATAATTCCCATGTTAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCCCTGGAGAGAACGTTTTGCTGCATTGGCTTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTTAGGGTTCCTAAATGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGGGATCCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgattcCTCTCATGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCAATGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGgcctcaaaaatgttttgctgcagtgatcacatttgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccggtgtggatcatcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTACGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGACAagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccggtgtggatcctcatgtgctgTTTAAGGGATGATTGTTGGCTGAAACTGGCCCCACACTGAGAACATATGAATGGTTTtgctccagtgtgaatcatcatgtgttgattaagctgtgatgattggctgaaactcttcccacactgagtacatgtgaatggcttctctccggtgtggatcctcatgtgttgtttAAGTTGTGATGAGTCTCtgaaattcttcccacactgagtacatgtgaatggtttctcatCAGTGTGGATCgtcatgtgtttattaaaggTTGATGAGTCTCtaaagctcttcccacactgagtacacgAGAATGgtctttctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGGTCTGATGAGTGTaaaaaaactctttccacaccgagtgcatgtgaagggtttctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATtggaaactctttccacactgagtacacttgaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGaaacaaagtttattttttagtaagtcaataaaaaataaatgtaggaTGAAAATTTGAAGTGTAAAGACTCTGTAAACACTGGC
>TCONS_00052855
GCGTAATATGATTTAGAAACTGCAATCGACTCCTTATTGCTGAtcaaaatgaacacatttaatgcaaaactaaatccatttctccactgattatttaAACCAGCAGGAACAAATAGTTTCTTGTGTTTTAATGAACACGACACAGTTTGAATtgtgaataaatgaagaataattgACAGGCAGAGTAAAGGGAAGTGCTGAggtgaacatgaatttaaccatgtgAATATTCATCTGTTCTTTACATTGAACGACTTCAGAACATTTGAGATATAGTAGGTCTACATGAAAAAACTTTCTGTTGCCTTATAATAGGCTGCCTTCATGGCTTATAAACACAGAATATCGATACCCAATCCAGCAAAAATGTGTGTTAACGAACAGATATctgattaaaatattttgatcAGTGCATCCCTATATGAAGGGGCAGAAAACAGTCAGTGGAGATTAAGAATAAATACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTACATTTGAGATATAGTAGATCTACATAAAAAAACTTTCTGTTGCCTTATAATAGGCTGCCTTCATGGCTTATAAACACAGAATATCGATACCCAATCCAGCAAAAATGTGTGTTAACGAACAGATATCTGATCAAAATATTTTGATCAGTGCATCCCTATATGAAGGGGCAGAAAACAGTCAGTGGAGATTAAGAATAGATACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTCCATTTTGTGCTGATGATACACAATTTTAAATTTCCATAAGACctagaattaaatttttttatcatattGGTCATTCATAACTTTGTTCAAGTTAAATGAACAAAAGCCCACCACTGGGTGTGTTTTATCTAAAGCTCAGTCTTTTACTCTGTTCACTGATAATTCCCATGTTAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCACTGGAGAGAATGTTTTGCTGCATTGGCGTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTCAGGGTTCCTAAAAGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGGCATCCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgaatcctgtCGTGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTCACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCACTGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAATTGAAAGATGCATCTTCAGCTGTGAAGcacttaaaaatgttttgctgcattgatcacatttgtgttttttctctccggtgtggatcctctTGTGTTGATGAAGGTGtgataattggctgaaactcttcccacactgagtacatgtgaacggtttctctccggtgtggatcctcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTGCGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTAGTAAAGTTTGATATGtatctgaaactcttcccacactgaggacatgtgaatggtttctctccagtgtggaccctcatgtgctgattaagggatgatgatagcctgaaactcttcccacactgagaacaTATGAAAGGTTTCGCTCCAgcgtgaatcatcatgtgtttattaaaggTCGATACGTgtttgaaactcttcccacactgagtacaggtGAATGGTTTCTCgtcagtgtggatcatcatgtgtttattaagttgTGAAGAGTCTctgaaactcttaccacactgagtacaggtgaatggtctctctccagtgtggatcatcatgtgtttatttaaGTTTGATGTGTAttggaaactcttcccacactgagtacatgtgaatggtctctctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGCTCTGAGGAGTGTCcaaaactcttttcacactgagtgcatgtgaatggtctctctccggtgtggatcttcaAGTGTAAATTAAGGCTTGATGAATATtggaaactctttccacactgagtacaCTTAAATGgtctctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATTGgaaactttttccacactgagtacacttaaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctccttttcaaaacacCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTC
>TCONS_00052856
ACCCAATCCAGCAAAAATGTGTGTTAACGAACAGATATctgattaaaatattttgatcAGTGCATCCCTATATGAAGGGGCAGAAAACAGTCAGTGGAGATTAAGAATAAATACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTACATTTTGTGCTGAtgatacacaattttatatttccATAAGACctagaattaaatttttttatcatattGGTCATTCATAACTTTGTTCAAGTTAAATGAACAGAAGCCCACCACTGGGTGTGTTTTGTCTAAAGCTCAGTCTTTTACTCTGTTCACTGATAATTCCCATGTTAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCACTGGAGAGAATGTTTTGCTGCATTGGCGTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTCAGGGTTCCTAAATGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGAGAACCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgattcCTCTCATGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCACTGTATAACTCTTTTCACACACAGGACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCAATGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGgcctcaaaaatgttttgctgcagtgatcacatttgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccggtgtggatcatcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTACGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGACAagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccggtgtggatcctcatgtgctgTTTAAGGGATGATTGTTGGCTGAAACTGGCCCCACACTGAGAACATATGAATGGTTTtgctccagtgtgaatcatcatgtgttgattaagctgtgatgattggctgaaactcttcccacactgagtacatgtgaatggcttctctccggtgtggatcctcatgtgttgtttAAGTTGTGATGAGTCTCtgaaattcttcccacactgagtacatgtgaatggtttctcatCAGTGTGGATCgtcatgtgtttattaaaggTTGATGAGTCTCtaaagctcttcccacactgagtacacgAGAATGgtctttctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGGTCTGATGAGTGTaaaaaaactctttccacaccgagtgcatgtgaagggtttctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATtggaaactctttccacactgagtacacttgaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGaaacaaagtttattttttagtaagtcaataaaaaataaatgtaggaTGAAAATTTGAAGTGTAAAGACTCTGTAAACACTGGC
>TCONS_00052858
aaaaaaatcaaTTTTTCCACTGATTATTTAAACCAGCAGGAACAAATAGTTTCTTGTGTTTTGATGAACACGACACAGTTTGAATtgtgaataaatgaagaataattgACAGGCAGAGCAAAGGGAAGTGCTGAggtgaacatgaatttaaccatgtgAATATTCATCTGTTCTTTACATTGAACGACTTCAGAACATTTGAGATATAGTAGATCTACATAAAAAAACTTTCTGTTGCCTTATAATAGGCTGCCTTCATGGCTTATAAACACAGAATATCGATACCCAATCCAGCAAAAATGTGTGTTAACGAACAGATATCTGATCAAAATATTTTGATCAGTGCATCCCTATATGAAGGGGCAGAAAACAGTCAGTGGAGATTAAGAATAGATACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTCCATTTTGTGCTGATGATACACAATTTTAAATTTCCATAAGACctagaattaaatttttttatcatattGGTCATTCATAACTTTGTTCAAGTTAAATGAACAAAAGCCCACCACTGGGTGTGTTTTATCTAAAGCTCAGTCTTTTACTCTGTTCACTGATAATTCCCATGTTAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCCCTGGAGAGAACGTTTTGCTGCATTGGCTTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTTAGGGTTCCTAAATGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGGGATCCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgattcCTCTCATGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCAATGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGgcctcaaaaatgttttgctgcagtgatcacatttgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccggtgtggatcatcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTACGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGACAagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccggtgtggatcctcatgtgctgTTTAAGGGATGATTGTTGGCTGAAACTGGCCCCACACTGAGAACATATGAATGGTTTtgctccagtgtgaatcatcatgtgttgattaagctgtgatgattggctgaaactcttcccacactgagtacatgtgaatggcttctctccggtgtggatcctcatgtgttgtttAAGTTGTGATGAGTCTCtgaaattcttcccacactgagtacatgtgaatggtttctcatCAGTGTGGATCgtcatgtgtttattaaaggTTGATGAGTCTCtaaagctcttcccacactgagtacacgAGAATGgtctttctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGGTCTGATGAGTGTaaaaaaactctttccacaccgagtgcatgtgaagggtttctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATtggaaactctttccacactgagtacacttgaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGaaacaaagtttattttttagtaagtcaataaaaaataaatgtaggaTGAAAATTTGAAGTGTAAAGACTCTGTAAACACTGGC
>TCONS_00052859
CCACTGATTATTTAAACCAGCAGGAACAAATAGTTTCTTGTGTTTTGATGAACACGACACAGTTTGAATtgtgaataaatgaagaataattgACAGGCAGAGCAAAGGGAAGTGCTGAggtgaacatgaatttaaccatgtgAATATTCATCTGTTCTTTACATTGAACGACTTCAGAACATTTGAGATATAGTAGATCTACATAAAAAAACTTTCTGTTGCCTTATAATAGGCTGCCTTCATGGCTTATAAACACAGAATATCGATACCCAATCCAGCAAAAATGTGTGTTAACGAACAGATATCTGATCAAAATATTTTGATCAGTGCATCCCTATATGAAGGGGCAGAAAACAGTCAGTGGAGATTAAGAATAGATACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTCCATTTTGTGCTGAtgatacacaattttatatttccATAAGACctagaattaaatttttttatcatattGGTCATTCATAACTTTTTTCCAAGTTAAATGAACAGAAGCCCACCTCTAGGTCTGTTTTGTCTAAAGCTCAGTCTTTTACTCTGTTCACTGATAATTCCCAAGTCAATTTCTGTACTTTCCACACTCAATCTCTCACACAAGAATTATCTGATGTTTAGACATGAAACACCTTTTCCCTGGAGAGAACGTTTTGCTGCATTGGCTTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTTAGGGTTCCTAAATGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGGGATCCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgattcCTCTCATGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCAATGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGgcctcaaaaatgttttgctgcagtgatcacatttgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccggtgtggatcatcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTACGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGACAagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccggtgtggatcctcatgtgctgTTTAAGGGATGATTGTTGGCTGAAACTGGCCCCACACTGAGAACATATGAATGGTTTtgctccagtgtgaatcatcatgtgttgattaagctgtgatgattggctgaaactcttcccacactgagtacatgtgaatggcttctctccggtgtggatcctcatgtgttgtttAAGTTGTGATGAGTCTCtgaaattcttcccacactgagtacatgtgaatggtttctcatCAGTGTGGATCgtcatgtgtttattaaaggTTGATGAGTCTCtaaagctcttcccacactgagtacacgAGAATGgtctttctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGGTCTGATGAGTGTaaaaaaactctttccacaccgagtgcatgtgaagggtttctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATtggaaactctttccacactgagtacacttgaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGaaacaaagtttattttttagtaagtcaataaaaaataaatgtaggaTGAAAATTTGAAGTGTAAAGACTCTGTAAACACTGGC
>TCONS_00052860
TACTCAGATAATGTCAGCTATTAATTGTGTGCCTCAGGGGTCAGTGCCATCATTTATATTTTACCTTTAGGTCATACATTTCATTATTATAGTCTTCATTTCCATTTTGTGCTGATGATACACAATTTTAAATTTCCATAAGACctagaattaaatttttttatcatattGGTCATTCATAACTTTGTTCAAGTTAAATGAACAAAAGCCCACCACTGGGTGTGTTTTATCTAAAGCTCAGTCTTTTACTCTGTTCACTGATAATTCCCATGTTAATTTCTCTACTTTTCACACTCAATCTCTCACACCAGAATTATCTGATGTTCAGACATGAAACACCTTTTCACTGGAGAGAATGTTTTGCTGCATTGGCGTCATTTGTGcagcttttctccagtgtggatgtTCATGTGTTTCTTAAGCCTCTCTAAGTATGTGAAACTCTGagaacactgatcacatgtgtacggcttctctccagtgtgaatcctctcatgtcttTTCAGGGTTCCTAAAAGACTAAACCTCTTGCTACACTGTGAACACTTgtacagtttctctccagtgtgaaccttCTCATGCGATTTTAGGGATCCTAACAGACTAAatctcttgtcacagtgtgaacacttgaaaggtttctctccagtgtgattcCTCTCATGCAGTTTCAGTTGTGTAGCTGTAATATAAGTCTTCTTACACTTAAAGCACATATACTGTCTAACAGCAGTGTGGGACTTCTGATGCCTTTTTAATTTGGACTCCAATGTATAACTCTTTTCACACACAGGACATGAATAAGGCTTCTCGCTTCTATGAAGTGCAAGATGGACCTTCAGCTTTGAAGgcctcaaaaatgttttgctgcagtgatcacatttgtgtggtttctctccggtgtggatcttcatgtgctGAGTAAGGCGtgatgataggctgaaactcttcccacactgagaacatgtgaacggtttctctccggtgtggatcatcatgtgttgattaagggatgatggtTCAGAGAAACTcgtcccacactgagtacatgtgtgtggtttctctccagtgtgggtcctcatgtgtCTATTACGGTGTGATGagtggctaaaactcttcccacactgagaacatgcatatggtttctctccagtgtggatcatcttGTGTTTACTAAAGTTTGACAagtgtctgaaactcttcccacactgaggacatgtgaatggtttctctccggtgtggatcctcatgtgctgTTTAAGGGATGATTGTTGGCTGAAACTGGCCCCACACTGAGAACATATGAATGGTTTtgctccagtgtgaatcatcatgtgttgattaagctgtgatgattggctgaaactcttcccacactgagtacatgtgaatggcttctctccggtgtggatcctcatgtgttgtttAAGTTGTGATGAGTCTCtgaaattcttcccacactgagtacatgtgaatggtttctcatCAGTGTGGATCgtcatgtgtttattaaaggTTGATGAGTCTCtaaagctcttcccacactgagtacacgAGAATGgtctttctccagtgtggatcctcatgtgttgattaaggtgtgatttGTGTTTGAAAGTCTTTCCACACAGTTTacatgtgaatggtctctctccgGTGTGGACCCTCATGTGTACATTAAGGTCTGATGAGTGTaaaaaaactctttccacaccgagtgcatgtgaagggtttctctccggtgtggatcctcatgtgttgattaagttGTGATAAGTATtggaaactctttccacactgagtacacttgaatggtttctctccggtgtggatcctcatgtgaagcTTAAGACTCTTTTTGGTTctaaagctctttccacactgagtgcaggtcaaacgattcttgtctctcctttttaaaaCACCAGAAGTCTGTAAATTAGGGTTTTTCCCAGCTTCAACATGACGTTCCTCCTCTTCACTCTCCTTATTCTCCCCAAATGGGTCTGaaacaaagtttattttttagtaagtcaataaaaaataaatgtaggaTGAAAATTTGAAGTGTAAAGACTCTGTAAACACTGGC

Function

GO:

id name namespace
GO:0019219 regulation of nucleobase-containing compound metabolic process biological_process
GO:0019222 regulation of metabolic process biological_process
GO:0016070 RNA metabolic process biological_process
GO:0080090 regulation of primary metabolic process biological_process
GO:0018130 heterocycle biosynthetic process biological_process
GO:0006351 transcription, DNA-templated biological_process
GO:0065007 biological regulation biological_process
GO:0006355 regulation of transcription, DNA-templated biological_process
GO:0006357 regulation of transcription by RNA polymerase II biological_process
GO:0051171 regulation of nitrogen compound metabolic process biological_process
GO:0006366 transcription by RNA polymerase II biological_process
GO:0090304 nucleic acid metabolic process biological_process
GO:0009058 biosynthetic process biological_process
GO:0009059 macromolecule biosynthetic process biological_process
GO:1901576 organic substance biosynthetic process biological_process
GO:0009889 regulation of biosynthetic process biological_process
GO:0097659 nucleic acid-templated transcription biological_process
GO:0031323 regulation of cellular metabolic process biological_process
GO:0031326 regulation of cellular biosynthetic process biological_process
GO:0006139 nucleobase-containing compound metabolic process biological_process
GO:0051252 regulation of RNA metabolic process biological_process
GO:0006725 cellular aromatic compound metabolic process biological_process
GO:1901360 organic cyclic compound metabolic process biological_process
GO:1903506 regulation of nucleic acid-templated transcription biological_process
GO:1901362 organic cyclic compound biosynthetic process biological_process
GO:0010467 gene expression biological_process
GO:0010468 regulation of gene expression biological_process
GO:0044249 cellular biosynthetic process biological_process
GO:0044260 cellular macromolecule metabolic process biological_process
GO:0044271 cellular nitrogen compound biosynthetic process biological_process
GO:0060255 regulation of macromolecule metabolic process biological_process
GO:0043170 macromolecule metabolic process biological_process
GO:0050789 regulation of biological process biological_process
GO:0050794 regulation of cellular process biological_process
GO:2001141 regulation of RNA biosynthetic process biological_process
GO:0032774 RNA biosynthetic process biological_process
GO:0034641 cellular nitrogen compound metabolic process biological_process
GO:0019438 aromatic compound biosynthetic process biological_process
GO:0010556 regulation of macromolecule biosynthetic process biological_process
GO:0034645 cellular macromolecule biosynthetic process biological_process
GO:0034654 nucleobase-containing compound biosynthetic process biological_process
GO:2000112 regulation of cellular macromolecule biosynthetic process biological_process
GO:0046483 heterocycle metabolic process biological_process
GO:0005634 nucleus cellular_component
GO:0043565 sequence-specific DNA binding molecular_function
GO:0003676 nucleic acid binding molecular_function
GO:0003677 DNA binding molecular_function
GO:0003690 double-stranded DNA binding molecular_function
GO:0097159 organic cyclic compound binding molecular_function
GO:0003700 DNA-binding transcription factor activity molecular_function
GO:0000976 transcription regulatory region sequence-specific DNA binding molecular_function
GO:0000977 RNA polymerase II transcription regulatory region sequence-specific DNA binding molecular_function
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific molecular_function
GO:1901363 heterocyclic compound binding molecular_function
GO:0140110 transcription regulator activity molecular_function
GO:0001067 regulatory region nucleic acid binding molecular_function
GO:1990837 sequence-specific double-stranded DNA binding molecular_function

KEGG:

id description
ko03230 Viral genome structure
ko03070 Bacterial secretion system
ko05164 Influenza A
ko03200 Viral proteins

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00052852 False 2982 lncRNA 0.40 2 61357205 61360319
TCONS_00052853 False 2679 lncRNA 0.40 2 61357807 61384192
TCONS_00052854 False 2684 lncRNA 0.39 2 61364003 61384192
TCONS_00052855 False 2840 lncRNA 0.39 2 61364134 61373422
TCONS_00052856 False 2285 lncRNA 0.40 2 61364484 61384192
TCONS_00052858 False 2486 lncRNA 0.40 2 61370951 61384192
TCONS_00052859 False 2471 lncRNA 0.40 2 61370967 61384192
TCONS_00052860 True 2092 lncRNA 0.41 2 61371345 61384192

Neighbor

gene id symbol gene type direction distance location
XLOC_025888 NA coding upstream 5199 61338539 ~ 61352006 (+)
XLOC_025889 NA coding upstream 13497 61340693 ~ 61343708 (+)
XLOC_025887 lmtk2 coding upstream 68431 61221194 ~ 61288774 (+)
XLOC_025886 CR352263.1 coding upstream 170100 61185660 ~ 61187105 (+)
XLOC_025885 NA coding upstream 316090 61039073 ~ 61041115 (+)
XLOC_025892 bri3 coding downstream 7444 61391636 ~ 61398938 (+)
XLOC_025893 FP340292.1 coding downstream 35887 61420079 ~ 61421085 (+)
XLOC_025894 znf1004 coding downstream 138567 61522759 ~ 61533846 (+)
XLOC_025895 zgc:113295 coding downstream 156335 61540527 ~ 61543750 (+)
XLOC_025896 fam20ca coding downstream 512322 61896514 ~ 61961833 (+)
XLOC_025429 BX649540.1 misc upstream 31108169 30248739 ~ 30249036 (+)
XLOC_025883 NA non-coding upstream 494453 60861247 ~ 60862752 (+)
XLOC_025881 NA non-coding upstream 558333 60797423 ~ 60798872 (+)
XLOC_025898 NA non-coding downstream 670502 62054694 ~ 62061838 (+)
XLOC_025904 NA non-coding downstream 823642 62207834 ~ 62250574 (+)
XLOC_025908 NA non-coding downstream 919850 62304042 ~ 62306549 (+)
XLOC_025913 NA non-coding downstream 984532 62368724 ~ 62384693 (+)
XLOC_025914 NA non-coding downstream 1040143 62424335 ~ 62542931 (+)

Expression


Co-expression Network