LOC110530653 (LOC106569481)



Basic Information


Item Value
gene id LOC110530653
gene name LOC106569481
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 76321125 ~ 76326543 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>XM_036986282.1
GGTGTGCCACTGAATATAAAGAGGAAGGATGGGAGGCTGAGCGCACAGGACTGAGAGGTGAAGACAGGTGTGGCTTTAAGATGAATCAACTTGTGGTTATCGTTGCGACACTCTTTGTCCCCACTACATACGGTGCTGCAGGCGGTTTGTGGTGTTACCATGATCCTAGTTGTGATGACACCACCTGGTCCACCATTGCCAGTGAACATTGCAATGGATCCCGTCAGTCTCCCATCAACATTGTCTCTGCATCAGCAGTGGGCGATGAAACCCTGACTGCCTTCACCTTCACCAAATACGGAGACAATTATACAATGAAGAATATCAAGAACACTGGCAAAACTGtcAAAGTGGAACTGACAAGTGGTGTCCAGGTTACAGGTGGGGCACTGTCTGAGGCCTATGACAGCCTGCAGTTTCACCTCCACTGGGGGAATGGTACCTCAGTACCTGGGTCAGAGCACACAGTGGATGGAACCCGCTACCCCATGGAGTTGCACATAGTAAATGCCAAGTCTTCGCACGACGGTAACACGACCACGGCCGTTGCAGACAGCACGGGACTCGCTGCTCTTGGCTTCTTCATAGAGGCCATGCCAGGTAATGCAACTGGTTCACCAGCAGCCTGGAATACTCTGACATCCTACTTGGCCAACATCACActaaaagATGATATTGTAAACATTACTCATGCTATTTCATTGGATGAGCTCCTGGATGGGGTGGACCGTAGCAAATACTACCGTTACCTTGGCTCCCTGACCACTCCAAATTGCAACGAGGCTGTAGTTTGGACCGTGTTCAAGGACCCTATCAAAGTCAGCCAGGACTTGATTGATCTCTTCAGTACAACATTGCACATTGACCACAACTCCACCTCTGCCTTGATGACCAACGTCTTCAGGAGCATCCAGCCTGTCAACGACTGGGTGGTGACGACCCAGGGCCGTCCAGCGTCGGGGGCTTCCACAATGTGCTCCTCTCTGGGCCTCATGGCCCTGGCCTGGATGCTGCTGAGGGTTTAGTGACGGCGAAATACTCCTTACCTGAAGTGCATTGCCATATCTCCATGAACCCTCAATCTACCAACATATTTTCCTTATATCGATTACCAACAAGGGTCATCTTGACCCCAAGGAGAAACTATTGGAATAAGCAACAATCATAGCGAAATGTGTTAAACTTATTTATTTTCAAAACATCATTATTTAGAAATGTAATGAATGTTATCTGATATAAAATGACCTAaacaaacagttttttttttcaaaaagaaAACAAGGGTTTTCCTGTATATAATGTGCAGCTTGAGTACAATCAACCTTAGTACAAACATCATATTTATCATCATTTGATTAAAGTATCATTTCGTTTTCAGAATTTTGCAGTAAATATTAATGTTGTCATGTGAATATTGTAAAAATGACTGCCATTTAAAAAGGTTGTTCAATTCACTTTTAAAAGTGATCCTAAGAGACATTGACACAAAA

Function


NR:

description
carbonic anhydrase 4-like

GO:

id name namespace
GO:0006730 one-carbon metabolic process biological_process
GO:0008270 zinc ion binding molecular_function
GO:0004089 carbonate dehydratase activity molecular_function

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
XM_036986282.1 True 1490 mRNA 0.45 9 76321125 76326543

Neighbor


gene id symbol gene type direction distance location
LOC110530650 LOC106569487 coding upstream 61217 76245705 ~ 76259908 (+)
LOC110530649 NA coding upstream 109226 76210540 ~ 76212064 (+)
LOC110530646 LOC106569459 coding upstream 219631 76073705 ~ 76101494 (+)
LOC110530645 LOC100194734 coding upstream 249219 76061869 ~ 76071906 (+)
LOC110530643 LOC106569460 coding upstream 276416 76007271 ~ 76044709 (+)
LOC110530652 LOC106569481 coding downstream 38548 76365091 ~ 76377798 (+)
LOC110530654 LOC106569481 coding downstream 63519 76390062 ~ 76406519 (+)
LOC110529140 NA coding downstream 96573 76423116 ~ 76425061 (+)
LOC110530655 LOC106569480 coding downstream 124679 76451222 ~ 76453376 (+)
LOC110530656 LOC106600124 coding downstream 200267 76526810 ~ 76720528 (+)
G747979 NA non-coding upstream 84580 76236345 ~ 76236545 (+)
G747965 NA non-coding upstream 93697 76227209 ~ 76227428 (+)
G747730 NA non-coding upstream 120017 76200908 ~ 76201108 (+)
G747728 NA non-coding upstream 123618 76196390 ~ 76197507 (+)
G748224 LOC100136012 non-coding downstream 105441 76431984 ~ 76432222 (+)
G748242 NA non-coding downstream 114750 76441293 ~ 76441507 (+)
G748244 NA non-coding downstream 117551 76444094 ~ 76444298 (+)
G748289 NA non-coding downstream 152305 76478848 ~ 76479172 (+)
G748290 NA non-coding downstream 153570 76480113 ~ 76480344 (+)
G747680 NA other upstream 205139 76115693 ~ 76115986 (+)
G746951 LOC106591969 other upstream 937997 75379450 ~ 75383243 (+)
LOC110530987 LOC106569478 other upstream 963968 75151419 ~ 75357954 (+)
G746936 NA other upstream 992930 75327772 ~ 75328195 (+)
nedd8 nedd8 other upstream 1287229 75014644 ~ 75033896 (+)
G748432 NA other downstream 380187 76706730 ~ 76708278 (+)
G748905 NA other downstream 824120 77150663 ~ 77177349 (+)
G748917 NA other downstream 852801 77179344 ~ 77180128 (+)
G748959 LOC106569508 other downstream 940109 77266652 ~ 77272660 (+)

Expression



Co-expression Network