LOC118965635


Basic Information

Item Value
gene id LOC118965635
gene name NA
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77087135 ~ 77090382 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986884.1
ATGGACCGCATCAGCaaactgacacagacagacagcggaCACCAGTATATCTGTGTTATGATTGACTACCTCACTAAATGGCCACAGGTACAGTCTCCACAGCCACCACACCAAAAACCTCCACCTCCGaaaccaccacaccagcaggtgCAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTACCACACCAGCAGGTGCAACCTCCACAGACACCACACCAGCGGCCTCCACAACTACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTATCACACCAGCAGGTGCAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTACCACACCAGCAGGTGAAGCCTCCACAGCCACCACACCAGCGGCCTCCACAACTACCACACCAGCAGCGACCACCACCTCCTCAGCCACCACACCACCACCACTCCAGCGACCACCATCTCCTCAGCCACCACACCAGCGACCACCATCTCCTCAGCCACCACCACACCAGCGACCACCATCTCCTCAGCCACCACCACACCAGCGACCACCATCTCCTCAGCCACCACACCAGCAACCACCACCTCCTCAGCCACCACACCAgcgaccaccaccaccatgtatGTATGTAA
>TU850126
ATCTCCTCAGCCACCACCACACCAGCGACCACCATCTCCTCAGCCACCACACCAGCAACCACCACCTCCTCAGCCACCACACCAgcgaccaccaccaccatgacaatgacccaacacacctccaggctgtgtaaggactatttgaccaagaaggatggagtgatggagtgctgcatcagatgacctggcctccacagctggttgagagaaggccaagagtgtgcaaagctgtcccaaggcaaagggtggctactttgaagaacctcaaatataaaatatattttgctttgtttaacccttttttggttactacataattccatgtgtaagttcatcgttttgatgtctttactattattcgac

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986884.1 False 864 mRNA 0.61 4 77087135 77089305
TU850126 True 363 lncRNA 0.48 2 77089193 77090382

Neighbor

gene id symbol gene type direction distance location
LOC110530659 LOC106569500 coding upstream 40688 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 366607 76526810 ~ 76720528 (+)
LOC110530655 LOC106569480 coding upstream 633759 76451222 ~ 76453376 (+)
LOC110529140 NA coding upstream 662074 76423116 ~ 76425061 (+)
LOC110530654 LOC106569481 coding upstream 680616 76390062 ~ 76406519 (+)
slc25a12 LOC106569494 coding downstream 38181 77127486 ~ 77155564 (+)
LOC110530663 LOC105020301 coding downstream 92559 77181864 ~ 77210814 (+)
LOC110530673 NA coding downstream 223096 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 282882 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 296276 77385581 ~ 77386837 (+)
G748846 NA non-coding upstream 59758 77027163 ~ 77027377 (+)
G748845 NA non-coding upstream 61423 77025374 ~ 77025712 (+)
G748826 NA non-coding upstream 91197 76993282 ~ 76995938 (+)
G748793 NA non-coding upstream 153819 76932724 ~ 76933316 (+)
G748779 NA non-coding upstream 172260 76914676 ~ 76914875 (+)
G748889 NA non-coding downstream 21166 77110471 ~ 77110683 (+)
G748890 NA non-coding downstream 21584 77110889 ~ 77111108 (+)
G748900 NA non-coding downstream 44464 77133769 ~ 77134439 (+)
G748903 NA non-coding downstream 53899 77143204 ~ 77173163 (+)
G748904 NA non-coding downstream 54973 77144278 ~ 77144646 (+)
G748432 NA other upstream 379491 76706730 ~ 76708278 (+)
G747987 cah12 other upstream 692806 76239950 ~ 76394329 (+)
G747680 NA other upstream 971149 76115693 ~ 76115986 (+)
G746951 LOC106591969 other upstream 1704007 75379450 ~ 75383243 (+)
G748905 NA other downstream 61358 77150663 ~ 77177349 (+)
G748917 NA other downstream 90039 77179344 ~ 77180128 (+)
G748959 LOC106569508 other downstream 177347 77266652 ~ 77272660 (+)
G749137 NA other downstream 213432 77302737 ~ 77382611 (+)
LOC110530993 LOC106569518 other downstream 794932 77863590 ~ 77887401 (+)

Expression


Co-expression Network