slc25a12 (LOC106569494)


Basic Information

Item Value
gene id slc25a12
gene name LOC106569494
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77127486 ~ 77155564 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986302.1
CAGccgaagagacacacacacccacttttAGAACAGACACGCACTAGACTAGAATAGTGGGGTTGATACAACCGTCTCACATTAGACCGGAGTTTGCTTTTCAATTAATTTATTTGGAATTCTGCAGTGAAAGCGCCTGCGCCAGCTAACTGTACGTGACGTCAAAACCAACATGGCGGTCAAGGTGCAATCCACCAAACGGGCAGACCCGAGCGAATTGAAGGTTATCTTTCAGAAGCATGCCAGTGTGGTGGATGCAGATGGCGAGAAGTTGATGACCCCGGGGGACTTTGTGCAGAAATACCTGGGCCTACACACACAGATCCATCACAACCCCAAAACTGTCCAGCTCATCGCAGGTGTAGCTGATACCACCAAGGACGGgctgATCTCGTTCCAGGAGTTCTTAGCATTTGAGTCGGTGCTGTGTGTTCCGGATGCCCTCTTCATCGTAGCCTTCCAGCTGTTTGACAAGACTGGCACTGGAGACATCTCTTTTGAGAATGTGCGGGACATCTTCAGCCAGACCACAGTGCACCACCACATCCCCTTTAACTGGGACTGTGAGTTCATCCGCCTGCACTTTGGACACGATCGCAAAAAACGCCTTAGCTACCTCGAGTTCACCCAGTTCCTACagGAGTTACAGTTGGAACATGCGCGCCAGGCCTTTGCCCAGAAGGACAAGAACAAAAGCGGCACAATCTCTGCCATGGACTTTAGTGACATCATGGCCACCATCCGACACCACGTGCTCACACCGTTCgtggaggaaaacctggtttcGGCTGCGGGGGGCAGCACCTCTCACATGGTCAGCTTCTCCTACTTCAATGCATTTAACTCTCTCCTAAACAACATGGAGTTGATCCGCAAGATCTACAGCACACTGGCCGGTAGCCGCAAGGATACACTGGTCACTAAAGagGAGTTTATCTTTGCTGCTAACAAGTTTGGCCAGATCTCTCCCATGGAGATCGACATCCTGTACCAGTTATCAGGCCTTCACTCCCACTCTGGACGTCTGAACGTTTCTGACATTGAGAGGATAGCCCCACTGGAGGAGGGAGCACTGCCCTATCACCTGGCTGAGATACAGAAACAGCAGAGCCAGGGTGATGGTTCCAGGTCAGTGTTGCTGCAGGTTGCAGAGTCAGCCTACCGTTTCAGCTTGGGCTCAATTGCTGGAGctacgGGAGCCACGGCGGTGTATCCTATAGACCTGGTTAAGACCAGGATGCAGAACCAGAGGAGTACAGGCTCGTTCGTAGGAGAACTGATGTACAAGAACAGCTTTGACTGTGCCAAGAAGGTGCTGCGCTATGAAGGTTTCTTCGGCTTCTACAGAGGTCTTCTTCCCCAGCTCATAGGCGTGGCTCCAGAGAAGGCCATCAAACTCACAgtGAATGACTTTGTGAGAGATAAGTTCACCGGTAAAGGCGACACCATTCCCTTTGCTGCTGAGGTGCTGGCTGGAGCCTGTgcagGGGGTTCCCAGGTGGTCTTTACTAACCCGCTGGAGATAGTCAAGATCAGATTGCAGGTGGCAGGAGAGATCACCACAGGACCTAGAATCAGCGCCCTCAGTGTTATCCGAGACCTCGGCTTGTTCGGCCTCTACAAGGGTGCTAAAGCGTGTTTCTTGAGAGACATCCCTTTCTCAGCCATCTTCTTCCCAGTGTACGCCCACACCAAGGCTCAGTTCGCCGACGAACAGGGAAGACTGGGCGCATTTCAGCTGTTAGCTGCTGGAGCCATCGgcgGTATCCCTGCTGCCTCCCTGGTGACGCCTGCCGATGTCATCAAGACGCGCCTGCAGGTAGCAGCGAGGGCGGGACAGACCACCTACACTGGAGTCACGGACTGCTTCAGGAAAATCATGCATGAGGAGGGATTCAGAGCGCTGTGGAAGGGagctggagctcGTATGTGTCGATCCTCTCCTCAGTTTGGGGTGACTCTGGTGACCTATGAGCTTCTACAGCGGTGGTTAAATGTGGACTTCGGAGGGcatcGTCCATCAGGGTCTGAGCCCACTCCTAAGTCTCGTATCTCAGAGCTTCCTCCGGTCAGTGCTGACCACGTGGGCGGTTACCGTCTGGCTACGGCCACCTTCGCTGGCGTGGAGAACAAGTTTGGCCTCCACCTGCCCAAGTTCAAGTCCTCTGGAGTGGTCTCCATTCACCATGATACCCCTTCTGCCTCCACTCAAGAGGAGGCTGCTGCCCCCTAAAGACTGGGCCTTTAACTACCTGCCCACTCCACTAGGGACTATACACTTAGACACACACTCCCAGGGGCCatgcaaaataaatacatactaatacacacacactgtttgtaGGGCCATGTaaccagaaatacacacacactcccagggTCATTGTAACCAGACGTACACACTGCTCCCCACTCCTCCCAGGGACTAATtcagtgctctctctccctggtcctggagagctgaCTGTAGGTCAGTAGTTAAAGCTCAGTCAGTAACCTGAACACTgcactgtgttgtactgtgttgtatcTCCAGTGGCTGCatgctcctcttctctcatccctcttttcATCTGAAACATGTATTTGAAAAGAAGCCTCGTCTCCCCCCCACATTCCggtgccccccccccacacattcCGGTTGCTCGCCTCTCCCCCACTCTGCGCTCTCCCCCATgctgcgctctcgctctctggtgGCTCCTCTCTTCTCAATAATAACTGATTTAGATTTTCTAGGATTTCTTTCGGATGCACATTGTGTGTAAGGCTACTTTGATTGGACAGTGTGTAGGGGATATTTGATTGGACAGCGTGTGTAAGGCTGATTGGGCCTTGCACAGGAAGTTACTGTACATATTGTAGATCTGCTGTACAGAGACGTGACACTGCTGGAAAGGAATTGTTACTGTAAGGTTGGACAATGTTATGGTAACGTTAGAGCAAAACCATGAGGATAATGAGAGAAACATTTTGGTTACAGAAATGTTAGAAAGCAACGTGACTAACGTCACTGTTATGTTAGAATGACGTTGGGACTCTGTCTCTTGAGAATCACTGATGTACAGACCTTTTCAACATAAGTGTTTATTGAGGAGAATCATGACCAAATGATTAGATaacttaaatccatttcaattcatTGTGTATTTTATTGAAATAAATAAAGCATATATGTATGGTTTTAATTCTA
>XM_036986303.1
TCAGAAATCGCTTTTAATGTTGTCTGCATGTTTGATCTGTTTTGTATTGGGTATATGACTATATCGTTTAAAGGATTACTTGAGTCTCTTTTTGTCGGGTGTAGGGCATTCATTGCTCCGTGCATCACTGCGGTAACGCCCGGTCTCTGGCCTTGAATGAATATCCACAAGGCGGAGTTAGCGATAAGGCTAGCGTCTACATCTGATTAACATTGCGATACTAGCTATTTACGAACTCACAAGATTGTGCAATAATGACAACCGCATCACTCAACTACCATCGTGTGTCTAAATACCCTCTTATCCGTTCTGCTCTTTGCTGTTTTAAACCTAACGAGTCATTTGAAGAAGGGTGCAATCCACCAAACGGGCAGACCCGAGCGAATTGAAGGTTATCTTTCAGAAGCATGCCAGTGTGGTGGATGCAGATGGCGAGAAGTTGATGACCCCGGGGGACTTTGTGCAGAAATACCTGGGCCTACACACACAGATCCATCACAACCCCAAAACTGTCCAGCTCATCGCAGGTGTAGCTGATACCACCAAGGACGGgctgATCTCGTTCCAGGAGTTCTTAGCATTTGAGTCGGTGCTGTGTGTTCCGGATGCCCTCTTCATCGTAGCCTTCCAGCTGTTTGACAAGACTGGCACTGGAGACATCTCTTTTGAGAATGTGCGGGACATCTTCAGCCAGACCACAGTGCACCACCACATCCCCTTTAACTGGGACTGTGAGTTCATCCGCCTGCACTTTGGACACGATCGCAAAAAACGCCTTAGCTACCTCGAGTTCACCCAGTTCCTACagGAGTTACAGTTGGAACATGCGCGCCAGGCCTTTGCCCAGAAGGACAAGAACAAAAGCGGCACAATCTCTGCCATGGACTTTAGTGACATCATGGCCACCATCCGACACCACGTGCTCACACCGTTCgtggaggaaaacctggtttcGGCTGCGGGGGGCAGCACCTCTCACATGGTCAGCTTCTCCTACTTCAATGCATTTAACTCTCTCCTAAACAACATGGAGTTGATCCGCAAGATCTACAGCACACTGGCCGGTAGCCGCAAGGATACACTGGTCACTAAAGagGAGTTTATCTTTGCTGCTAACAAGTTTGGCCAGATCTCTCCCATGGAGATCGACATCCTGTACCAGTTATCAGGCCTTCACTCCCACTCTGGACGTCTGAACGTTTCTGACATTGAGAGGATAGCCCCACTGGAGGAGGGAGCACTGCCCTATCACCTGGCTGAGATACAGAAACAGCAGAGCCAGGGTGATGGTTCCAGGTCAGTGTTGCTGCAGGTTGCAGAGTCAGCCTACCGTTTCAGCTTGGGCTCAATTGCTGGAGctacgGGAGCCACGGCGGTGTATCCTATAGACCTGGTTAAGACCAGGATGCAGAACCAGAGGAGTACAGGCTCGTTCGTAGGAGAACTGATGTACAAGAACAGCTTTGACTGTGCCAAGAAGGTGCTGCGCTATGAAGGTTTCTTCGGCTTCTACAGAGGTCTTCTTCCCCAGCTCATAGGCGTGGCTCCAGAGAAGGCCATCAAACTCACAgtGAATGACTTTGTGAGAGATAAGTTCACCGGTAAAGGCGACACCATTCCCTTTGCTGCTGAGGTGCTGGCTGGAGCCTGTgcagGGGGTTCCCAGGTGGTCTTTACTAACCCGCTGGAGATAGTCAAGATCAGATTGCAGGTGGCAGGAGAGATCACCACAGGACCTAGAATCAGCGCCCTCAGTGTTATCCGAGACCTCGGCTTGTTCGGCCTCTACAAGGGTGCTAAAGCGTGTTTCTTGAGAGACATCCCTTTCTCAGCCATCTTCTTCCCAGTGTACGCCCACACCAAGGCTCAGTTCGCCGACGAACAGGGAAGACTGGGCGCATTTCAGCTGTTAGCTGCTGGAGCCATCGgcgGTATCCCTGCTGCCTCCCTGGTGACGCCTGCCGATGTCATCAAGACGCGCCTGCAGGTAGCAGCGAGGGCGGGACAGACCACCTACACTGGAGTCACGGACTGCTTCAGGAAAATCATGCATGAGGAGGGATTCAGAGCGCTGTGGAAGGGagctggagctcGTATGTGTCGATCCTCTCCTCAGTTTGGGGTGACTCTGGTGACCTATGAGCTTCTACAGCGGTGGTTAAATGTGGACTTCGGAGGGcatcGTCCATCAGGGTCTGAGCCCACTCCTAAGTCTCGTATCTCAGAGCTTCCTCCGGTCAGTGCTGACCACGTGGGCGGTTACCGTCTGGCTACGGCCACCTTCGCTGGCGTGGAGAACAAGTTTGGCCTCCACCTGCCCAAGTTCAAGTCCTCTGGAGTGGTCTCCATTCACCATGATACCCCTTCTGCCTCCACTCAAGAGGAGGCTGCTGCCCCCTAAAGACTGGGCCTTTAACTACCTGCCCACTCCACTAGGGACTATACACTTAGACACACACTCCCAGGGGCCatgcaaaataaatacatactaatacacacacactgtttgtaGGGCCATGTaaccagaaatacacacacactcccagggTCATTGTAACCAGACGTACACACTGCTCCCCACTCCTCCCAGGGACTAATtcagtgctctctctccctggtcctggagagctgaCTGTAGGTCAGTAGTTAAAGCTCAGTCAGTAACCTGAACACTgcactgtgttgtactgtgttgtatcTCCAGTGGCTGCatgctcctcttctctcatccctcttttcATCTGAAACATGTATTTGAAAAGAAGCCTCGTCTCCCCCCCACATTCCggtgccccccccccacacattcCGGTTGCTCGCCTCTCCCCCACTCTGCGCTCTCCCCCATgctgcgctctcgctctctggtgGCTCCTCTCTTCTCAATAATAACTGATTTAGATTTTCTAGGATTTCTTTCGGATGCACATTGTGTGTAAGGCTACTTTGATTGGACAGTGTGTAGGGGATATTTGATTGGACAGCGTGTGTAAGGCTGATTGGGCCTTGCACAGGAAGTTACTGTACATATTGTAGATCTGCTGTACAGAGACGTGACACTGCTGGAAAGGAATTGTTACTGTAAGGTTGGACAATGTTATGGTAACGTTAGAGCAAAACCATGAGGATAATGAGAGAAACATTTTGGTTACAGAAATGTTAGAAAGCAACGTGACTAACGTCACTGTTATGTTAGAATGACGTTGGGACTCTGTCTCTTGAGAATCACTGATGTACAGACCTTTTCAACATAAGTGTTTATTGAGGAGAATCATGACCAAATGATTAGATaacttaaatccatttcaattcatTGTGTATTTTATTGAAATAAATAAAGCATATATGTATGGTTTTAATTCTA

Function

NR:

description
calcium-binding mitochondrial carrier protein Aralar1-like

GO: NA

KEGG:

id description
K15105 SLC25A12_13, AGC; solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986302.1 False 3196 mRNA 0.51 18 77127486 77155564
XM_036986303.1 True 3364 mRNA 0.50 18 77127698 77155564

Neighbor

gene id symbol gene type direction distance location
LOC118965635 NA coding upstream 38181 77087135 ~ 77090382 (+)
LOC110530659 LOC106569500 coding upstream 81039 77019461 ~ 77046447 (+)
LOC110530656 LOC106600124 coding upstream 406958 76526810 ~ 76720528 (+)
LOC110530655 LOC106569480 coding upstream 674110 76451222 ~ 76453376 (+)
LOC110529140 NA coding upstream 702425 76423116 ~ 76425061 (+)
LOC110530663 LOC105020301 coding downstream 26300 77181864 ~ 77210814 (+)
LOC110530673 NA coding downstream 156837 77312401 ~ 77344087 (+)
LOC110530672 NA coding downstream 216623 77372187 ~ 77377386 (+)
LOC110530676 NA coding downstream 230017 77385581 ~ 77386837 (+)
LOC110530677 LOC106569510 coding downstream 307239 77462803 ~ 77467237 (+)
G748890 NA non-coding upstream 16378 77110889 ~ 77111108 (+)
G748889 NA non-coding upstream 16803 77110471 ~ 77110683 (+)
G748846 NA non-coding upstream 100109 77027163 ~ 77027377 (+)
G748845 NA non-coding upstream 101774 77025374 ~ 77025712 (+)
G748919 NA non-coding downstream 25033 77180597 ~ 77181296 (+)
G748895 NA non-coding downstream 55618 77211182 ~ 77212460 (+)
G748930 NA non-coding downstream 60378 77215942 ~ 77216154 (+)
G748931 NA non-coding downstream 60952 77216516 ~ 77217032 (+)
G748933 NA non-coding downstream 65507 77221071 ~ 77221307 (+)
G748432 NA other upstream 419842 76706730 ~ 76708278 (+)
G747987 cah12 other upstream 733157 76239950 ~ 76394329 (+)
G747680 NA other upstream 1011500 76115693 ~ 76115986 (+)
G746951 LOC106591969 other upstream 1744358 75379450 ~ 75383243 (+)
G748917 NA other downstream 23780 77179344 ~ 77180128 (+)
G748959 LOC106569508 other downstream 111088 77266652 ~ 77272660 (+)
G749137 NA other downstream 147173 77302737 ~ 77382611 (+)
LOC110530993 LOC106569518 other downstream 728673 77863590 ~ 77887401 (+)
G749663 tcf3 other downstream 1088646 78244210 ~ 78245615 (+)

Expression


Co-expression Network