XLOC_025893 (FP340292.1)


Basic Information

Item Value
gene id XLOC_025893
gene name FP340292.1
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 61420079 ~ 61421085 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050755
cacacaaacccatacACCTGCACATATATGCACATAAAcgcacatatatgcacacacaactgcacatatacacgcacacacacacacatggacacacataCCTGCATATATGCACACTCaggcacacagacacacacatgaaaGCGCACACATGTACATTTatgcacacagaaacacacatggacatgcacatacacactcaaacacacctgcacatatacacacacgcacacaccttctTATAtacgcatgcacacaaacacggaCACACACGCATGAACATTtacgcacacatgcatgcacacaaacacatatacgcacatgtatgcacacacacatctatctacacacgctcacacacaaactcaattgcacacacacacacgcgcacacacacacacgcacacagacacacacatggacatgcacatacacactcaaacacatcctgcacatatacacacacgcacacaccttcatatatacgcatgcacacaaacacggaCACACACGCATGAACATTtacgcacacatgcatgcacacaaacacatatacgcacatatatgcacacacacatctatctacacacgctcacacacaaactcaattgcacacacacacgcgcacatacgcgcacatacacacacacgcacactcaggcacagagacacacacatggacatgcacatacacactcaaacacacctgcacatatacacacacgcacacaccttcatatatacgcatgcacacaaacacggaCACACACGCATGAACATTtacgcacacatgcatgcacacaaacacatatacgcacatgtatgcacacacacatctatctacacacgctcacacacaaactcaattgcacacacacacacatacacacacacacacacacacacacacacacacacacacacacacacagcacaaacacacaaatcacaagtcattattattaattaatagaaattattattattgttattattatatatataca

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000101684

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050755 True 1007 mRNA 0.44 1 61420079 61421085

Neighbor

gene id symbol gene type direction distance location
XLOC_025892 bri3 coding upstream 21141 61391636 ~ 61398938 (+)
XLOC_025890 NA coding upstream 35887 61357205 ~ 61384192 (+)
XLOC_025891 NA coding upstream 43024 61368489 ~ 61377055 (+)
XLOC_025888 NA coding upstream 68073 61338539 ~ 61352006 (+)
XLOC_025889 NA coding upstream 76371 61340693 ~ 61343708 (+)
XLOC_025894 znf1004 coding downstream 101674 61522759 ~ 61533846 (+)
XLOC_025895 zgc:113295 coding downstream 119442 61540527 ~ 61543750 (+)
XLOC_025896 fam20ca coding downstream 475429 61896514 ~ 61961833 (+)
XLOC_025897 rai1 coding downstream 579737 62000822 ~ 62053314 (+)
XLOC_025898 NA coding downstream 633609 62054694 ~ 62061838 (+)
XLOC_025429 BX649540.1 misc upstream 31171043 30248739 ~ 30249036 (+)
XLOC_025885 NA non-coding upstream 378964 61039073 ~ 61041115 (+)
XLOC_025904 NA non-coding downstream 786749 62207834 ~ 62250574 (+)
XLOC_025908 NA non-coding downstream 882957 62304042 ~ 62306549 (+)
XLOC_025913 NA non-coding downstream 947639 62368724 ~ 62384693 (+)
XLOC_025914 NA non-coding downstream 1003250 62424335 ~ 62542931 (+)

Expression


Co-expression Network