LOC110530679 (LOC106569512)


Basic Information

Item Value
gene id LOC110530679
gene name LOC106569512
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 77543520 ~ 77547016 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021613917.2
AAATTGTAAACATAGATCTGTTAAAGAACACAAACGCCATCTTGACAGCAGCCTTAAAATGGCAGAGAAATGCCAGGGAGAAACCGAGCTACGGACAAGGTTTCTTTTATTGTTTTGAATAGATAGTCCCTTCCCTAATTGTCTACAAACGTAGCTAGGGGGTTGATGGCCAGTGAGAGAGCCGAAAGACGTTAAAATGGATATCACAACAGCGGTTTTCAACGCGGCCAGAGATGGTAAGCTGAAACTTATCCAGAAGTTGCTGAGTAACAAAAGTCCCGAGGAGTTGGAGGCTCTCGCCGAGGAGAAAACGCAGGGAGGCACCCCTCTCCTCATTGCCTCTCGATACGGACACTTAGAGGTTGCCGActatttgcttgaaaattgtaaAGCTAACGTGGAACTAGGAGGCTCGGTGAACTTTGACGGCGAGACGATTGAAGGGGCTCCCCCGCTATGGGCGGCTTCAGCGGCTGGTCACCTCCCTGTCGTCCGCACACTCCTTAAACACGGTGCCTCTGTCAACAACACTACGCTGACCAACTCAACGCCCCTCCGCGCTGCCTGCTTCGATGGTCACCTGGAGATTGTCCGCTACCTGGTGGAACACCGAGCCGATATGGAGGTAGCCAACCGCCACGGCCACACCTGCCTGATGATCTCCTGCTACAAGGGCCACAAAGAGATAGCCAAGTTCCTCTTGGAGCGGGGGGCCGATGTCAACCGCAAGAGTGTGAAAGGCAACACTGCACTCCACGACTGTGCAGAGTCCGGTAGCCTGGACATCATGAAGATGCTGCTGAAATGCAATGCCCGCATGGAGAGGGATGGATACGGCATGACCCCGCTTCTAGCTGCCAGCGTCACGGGGCACACCAACATCGTGGAGTACCTCGCCCACCAGCCACACTCCTCGCGAGAAGAACGCGTTGATGCTCTCGAACTCCTAGGGGCCACCTTTGTGGATAAGAAGAGAGACCTCTTGGGGGCCATGAGATACTGGAGGAGAGCCATGGAGCTGAGACAACCAGCTGACAAGCTGGGACTCCTGGCCAAGCCCCCTCCAGGTACCCCTGTCCCTGCCTATGACTGTGCCCGTGAGGTGAGCACGGCAGAGGAGCTGGAGGCTCTGATCACAGACCCCGATGAGATGCGGATGCAGGCCCTGCTGGTACGTGAGAGAATTCTGGGGCCCTCGCACCCCGACACCTCCTACTACATCCGCTACAGAGGGGCCGTCTACGCCGACTCAGGCAACTTTGAGCGCTGCATCAGCCTGTGGAAGTATGCCCTGGACATGCAGCAGAGTAACCTGGACCCCCTCAGCCCCATGACAGCCAGCAGCTTCTTGTCCTTCGCCGAGCTCTTCTCCTTCGTGCTGCAGGACCGGGCCAAGGGCACCCTGGCAACGCGAGTCACCTTCCACGACCTGATGGGGGTGTTGGGGAAGAGTGTGAAGGAGGTGGAGAGGGCTGTGGCCCAGAGGGACAGCCCCCCCGAAGCCCCCCAGTTCACCAAGGCCCTGTCCATCATCCTCCACCTGGTGTTCCTGCTGGAGAAGCTGGAGTGCACTGCAGAGCAGGAGCATCTGAAGAAGCAGACGGTGTACCGCCTCCTGAAGCTGAACCCGCGGGCGAGGAGAGGCTTCACCCCCCTGCATATGGCCGTGGACAAGGACACCACGTCGGTGGGCCGCTACCCTGTAGGTCGCTTCCCCTCCCAGACTGTGGCCTCGCTGCTGCTGGAGTGTGGGGCGGACGTGGACTCACGGGACTGTGATAACAACACGCCCCTGCACATTGCCGCCAGCAACGGTTGCCCGGAGATCATGGCGTTGCTGGTGAGGGCGGGGGCACACTTCGACGCCACCAACTCCCAGAGGAAGACCGCATACAACCTGCTGGACGAACAGAGCAACGGGCACCCGGCCCTCTTCCCCCTCAACTACGTCACTCTGCAGTGCCTGGCGGCACGTGCCATTGAGAGGCACAGACTGCCCTACAAGGGCCTCATCTCTGAGGAGATGGAGGTGTTTATTGAGCTGCACTGAAACCCCCCTCTTTGCTAAATATCCCCACCCTATCCCCATCATTGCCCCAGACGCcttttaaaccattcaacaatGACCCCCATCATCTTCACCCCACTTCACCCATGTCCCCCTGACTCCCCTCACCTTACCCAAGCCCGTCTCCCTTCCCTATGGTTATTCTTCTCTGTGCCTCTCCAAACTCCAGACTGTGAGCTCTGTCTCAGATTCAGACCAAATCACAGCAATAAACCTCCCGGCCACTAAACATTATACTGACAACAGACTGGGAGCATCTTAATTGTGGCTACATGCTCTCTTTAGATGACCTATGATTAACACATGGACACATTCTATGTGCTAGGTTGCTATTTGTTTGCAGGTGGGGGGGAACCTTGACCTGATTTTAGGCTTTTATGCTttctgtttgacatttttctTCTGTTTTTCTCAGTAAGATGGAGGACTGCTCACACAAAGGACAGTATAGCGGTGCCTGTATGTATTGGCTGCTGGCTTGTTTTTAGGTGGGAATGGAATCTGTATTACTTGATGGGACATGATCAAATATTGCATGACATGAGCCTTAAAGAGTGAATAGGATAGCTTGTTTGTTAAATCTGTCTTGTTTTGCAAGTTTATCGAGAAGCATCCTTTGAACAAACAAAGTACACACGCTTGTATTTTTATCCTCAATTGAGCATTATTTAATCCCCTGCCTTTCACTTTGACATTTTAAGGAGTGTTTGAAAACTATTTTATGCCAAAACTCTAGCCTTATATCGGTTCTAAATGTGTGATCTTACAGGTTAGCCTTATCTTACTGAACTAGCTTACTACGAATGGAGCACCTAACAACTGTGGTGTGCAGACTAGCATGGGGACTCTCATAAGAATACAGTGTTCTAGCCTACATTTCTTTAGCTCTGTCTAGACTGTGCAATGTGTTTTACAGCTTGGTCAATCTCTGGAAGTCTCCCTCTGGACAGCTTGGATACTgtgagaaaggagagatggagatttctctccatctcctcctgagTGAATGTTTATGGACTGTTGATCCCAGTATCAGGTCATCTATTCAAGCCTAGCTATCTACAGTCACCTGTTGTTGATATCAGAACCCAGAGTTGCTACTATGAACCACAGATGCAGGTGAGGAGGATGGGGAATGGATCACACACTGCATCTTTGTCTTAttcttttgtcttttgttttggaCAGTCAGTTTTGCGTTCTTGTTTTTATCATACATGCTTTCATTAGTTTCTGTTTGTCCCTATGTAAAAACCCACCTGATTGAATGCACTTTGAAAAAAACAAACCCCTAAAGGGTAACTTTACAACATCTGGGCTATGGACTCTGAGCCTTTCTCTCTCAACAACTGATTTATTCATTGAACTGATGGTAACTTCAAAGCAAAACTGTGTTGAGATACTTGAATAAAATTCAGTATCCCTGCAG

Function

NR:

description
protein fem-1 homolog A-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021613917.2 True 3497 mRNA 0.51 1 77543520 77547016

Neighbor

gene id symbol gene type direction distance location
LOC110530678 LOC106569511 coding upstream 1969 77478347 ~ 77541551 (+)
LOC110530677 LOC106569510 coding upstream 76283 77462803 ~ 77467237 (+)
LOC110530676 NA coding upstream 156683 77385581 ~ 77386837 (+)
LOC110530672 NA coding upstream 166134 77372187 ~ 77377386 (+)
LOC110530673 NA coding upstream 199433 77312401 ~ 77344087 (+)
LOC110530680 LOC106569513 coding downstream 12335 77559351 ~ 77763821 (+)
LOC110530682 LOC106569515 coding downstream 163123 77710139 ~ 77728323 (+)
LOC110530992 LOC106569517 coding downstream 195333 77742349 ~ 77811376 (+)
LOC118965560 NA coding downstream 264894 77811815 ~ 77815920 (+)
LOC110530993 LOC106569518 coding downstream 316574 77863590 ~ 77887401 (+)
G749277 NA non-coding upstream 93191 77449995 ~ 77450329 (+)
G749252 NA non-coding upstream 110381 77432779 ~ 77433139 (+)
G749137 NA non-coding upstream 160909 77302737 ~ 77382611 (+)
G749337 NA non-coding downstream 4318 77551334 ~ 77551641 (+)
G749338 NA non-coding downstream 4772 77551788 ~ 77552025 (+)
G749347 NA non-coding downstream 26987 77574003 ~ 77575147 (+)
G749390 NA non-coding downstream 87551 77634567 ~ 77635923 (+)
G748959 LOC106569508 other upstream 270860 77266652 ~ 77272660 (+)
G748917 NA other upstream 363392 77179344 ~ 77180128 (+)
G748905 NA other upstream 366171 77150663 ~ 77177349 (+)
G748432 NA other upstream 835876 76706730 ~ 76708278 (+)
G749663 tcf3 other downstream 697194 78244210 ~ 78245615 (+)
G750533 LOC106569543 other downstream 1250126 78797142 ~ 78797548 (+)
G750854 NA other downstream 1432214 78979230 ~ 78979981 (+)
G750935 NA other downstream 1648254 79195270 ~ 79197378 (+)

Expression


Co-expression Network