LOC110530686 (LOC106569672)


Basic Information

Item Value
gene id LOC110530686
gene name LOC106569672
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 79689267 ~ 79713549 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_036986415.1
GACTAACAAAACAGAGTCGACTTATCGAAGTTTCACAAAAGTTTATTGCTAGTTATGTTAGCGAATTGGCGAATTTATAAGCACATATGGCAATAAATATAAAGTTTAATTATAAagttgtagaataaaagtgaaattGTATTTACCGTCCGAGTCGAAGTATCGAAACGGGGAGTAAAACGCATTGTTCGAACTGGACCGCCTAACAAGACTGCTGAGGAGAGCTGTGGTGGCACTGACAAGGCAAGCCAAGCTCAAACAGTAGGAGAAATGCAGCCTCCTGGACTGACGGGGAACTCTGTCTGAGGATCTCTGTCTGGGGCTGTGGTAATGTCTCTAGACAGACTAACATTTGAAGGACAAACAACCTTACCAAAAATGGAAATATTAGGATTTTCCAACAACTCTTGTGAAGGTTCCGACCACTTCTCCTAGGTCCATCAGATGTTTTTTTCATTATCACAATTTTTCGGATTAACTGGGATCGTCCCACTTATGCTCTTAAATGGATTCCGTTGGCTCTCTGGTTAGCATTCAAGATGAGGACCAGTCCTCTCGTGTCCGATACAGGATGGAGGCGTCTTGTCTGGAGCTGGCCCTGGAGGGGGAGCGGCTCTGTAAGGTGGACGACTACAGCGCAGGGGTGTCCTTCTTCGAGGCGGCCATCCAGGTTGGAACTGAGGACCTGCAGGTGCTGAGTGCCATCTATAGCCAGCTGGGCAACGCCTACTTCCACCTGCATGATTACGGCAAGGCCTTGGAGTTCCACCATCATGACCTCACCTTGACCAGGACCATCAGGGACCAGCAGGGAGAGGCGAAAGCCAGTGGTAACCTAGGCAACACGCTAAAGGTGTTGGGTAGGTTTGATGAGGCTTTGGTCTGCTGTCAGAGGCACTTAGACATCGCCGTGGACCTGCACGACAAGGTGGGGCAGGCGAGGGCGCTGTATAACTTTGGGAACGTGTATCATGCCAAAGGCAAGACCATCTGTTGGAGCGGAGCGGAGCCTGGAGAGTTCCCTGAGGAGGTCATGACTGCACTTAGGAAAGCAGCGGAATACTATGAAGCAAACTTATCCATAGTGAAGGAGCTTGGAGATTGTGCCGCCCAGGGCCGAACATACGGTAACCTTGGCAACACACACTACCTATTAGGAGACTTCCAGAATGCAGTGGCCTCACATGAACAGCGCCTCCAGATTGCCAAGGAGTTTGGCGACCGCTCGGCAGAGAGAAGGGCCTACTGCAACCTGGGGAACGCCTATATCTTTCTGGGGGAATTTGAAGTGGCAGCTGAGCATTACAAGAGGACTCTGCAGCTGGCCAGACtgctgaaggaccgggctgtagAGGCTCAGGCCTGTTACAGTCTGGGAAACACCTACACATTGCTCCAGGACTACGATAGGGCTATAGACTACCACCTCAAACACCTCATCATCGCACAGGACCTCAACGACAGGATCGGTGAGGGCCGGGCGTGCTGGAGTTTAGGGAACGCTCACACAGCCCTGGGGAACCATGACCAGGCCATGCACTTTGCTGAGAAACACCTGGAGATCTCCAAAGAGACTGGGGACCGGAGTGGAGAACTCACAGCCCGTATGAACGTGTCAGACTTGCagatggtcctggggctgagctATAGAACCAACGACTCCACCCTGTCTGAGAACCCCATCAAGGACATCGACTACAACCTGCACGGGGCCAGGCCCAGGAATGGCAGACGGCACAGCATGGAAAACCTGGAGCTCATGAAACTCACCCCAGACAAGATCAACgctcAGAAGTGGAACAGTGACATCCTGACCAAGCAGTCTAAACCCACCCTGGCTAAGAGCTCCTCTAAGCTGTTCTTTGTCAGCCGTCTGCAGGGCAAGAAGCACAAGGCTGGGGGCTCCAGTAAAGTCCTGCAGGACACCAGTAACACCTCACAAACCCCCGCACAGGGACCACAGAAGAGGGCCAGTCCAGACATGCTCGGGGACGAGGGCTTCTTTGACCTGCTGAGTCGTTTCCAGAGCAACAGGATGGACGACCAGCGCTGTTCCATACAGGACAAGAGCTCCTCTGACTCTCCAGCCAGAGCCATGAGGAAATctgtGTCAGAGTCAGCGGCTGTAACAGGCctgggttctgggtctggttgTCGGTTAGAGGAcggtggaggtgctgggggtaGTTTGCCCGTCCTTCGGGTCCACCAGAACAGAAGCCAGGCTGTCCTCAGCCACCTGATGGCCAATGCAGATAACTCTGAGCCTGACGATGACTTCTTCAACATGCTCGTCAAGTGCCAGGGTTCCCGTTTGGATGACCAGCGCTGCGCCCCTCCCCCGGCACGTGGCCCCACTGTCCCAGACGAGGACTTCTTCAGCCTCATCATGAGGTCCCAGGCCAAACGCATGGACGAGCAGCGGGTCACCCTGCCCTCTGCAGCACGGCCATGCTCCAACTGAGCCTTGCCCAAGGAGAGGGCCCCCGATGGCGGGGTGAAAACCCAGGAGAGTGGGCCTCTC
>XM_036986418.1
GACTAACAAAACAGAGTCGACTTATCGAAGTTTCACAAAAGTTTATTGCTAGTTATGTTAGCGAATTGGCGAATTTATAAGCACATATGGCAATAAATATAAAGTTTAATTATAAagttgtagaataaaagtgaaattGTATTTACCGTCCGAGTCGAAGTATCGAAACGGGGAGTAAAACGCATTGTTCGAACTGGACCGCCTAACGATGGAGGCGTCTTGTCTGGAGCTGGCCCTGGAGGGGGAGCGGCTCTGTAAGGTGGACGACTACAGCGCAGGGGTGTCCTTCTTCGAGGCGGCCATCCAGGTTGGAACTGAGGACCTGCAGGTGCTGAGTGCCATCTATAGCCAGCTGGGCAACGCCTACTTCCACCTGCATGATTACGGCAAGGCCTTGGAGTTCCACCATCATGACCTCACCTTGACCAGGACCATCAGGGACCAGCAGGGAGAGGCGAAAGCCAGTGGTAACCTAGGCAACACGCTAAAGGTGTTGGGTAGGTTTGATGAGGCTTTGGTCTGCTGTCAGAGGCACTTAGACATCGCCGTGGACCTGCACGACAAGGTGGGGCAGGCGAGGGCGCTGTATAACTTTGGGAACGTGTATCATGCCAAAGGCAAGACCATCTGTTGGAGCGGAGCGGAGCCTGGAGAGTTCCCTGAGGAGGTCATGACTGCACTTAGGAAAGCAGCGGAATACTATGAAGCAAACTTATCCATAGTGAAGGAGCTTGGAGATTGTGCCGCCCAGGGCCGAACATACGGTAACCTTGGCAACACACACTACCTATTAGGAGACTTCCAGAATGCAGTGGCCTCACATGAACAGCGCCTCCAGATTGCCAAGGAGTTTGGCGACCGCTCGGCAGAGAGAAGGGCCTACTGCAACCTGGGGAACGCCTATATCTTTCTGGGGGAATTTGAAGTGGCAGCTGAGCATTACAAGAGGACTCTGCAGCTGGCCAGACtgctgaaggaccgggctgtagAGGCTCAGGCCTGTTACAGTCTGGGAAACACCTACACATTGCTCCAGGACTACGATAGGGCTATAGACTACCACCTCAAACACCTCATCATCGCACAGGACCTCAACGACAGGATCGGTGAGGGCCGGGCGTGCTGGAGTTTAGGGAACGCTCACACAGCCCTGGGGAACCATGACCAGGCCATGCACTTTGCTGAGAAACACCTGGAGATCTCCAAAGAGACTGGGGACCGGAGTGGAGAACTCACAGCCCGTATGAACGTGTCAGACTTGCagatggtcctggggctgagctATAGAACCAACGACTCCACCCTGTCTGAGAACCCCATCAAGGACATCGACTACAACCTGCACGGGGCCAGGCCCAGGAATGGCAGACGGCACAGCATGGAAAACCTGGAGCTCATGAAACTCACCCCAGACAAGATCAACgctcAGAAGTGGAACAGTGACATCCTGACCAAGCAGTCTAAACCCACCCTGGCTAAGAGCTCCTCTAAGCTGTTCTTTGTCAGCCGTCTGCAGGGCAAGAAGCACAAGGCTGGGGGCTCCAGTAAAGTCCTGCAGGACACCAGTAACACCTCACAAACCCCCGCACAGGGACCACAGAAGAGGGCCAGTCCAGACATGCTCGGGGACGAGGGCTTCTTTGACCTGCTGAGTCGTTTCCAGAGCAACAGGATGGACGACCAGCGCTGTTCCATACAGGACAAGAGCTCCTCTGACTCTCCAGCCAGAGCCATGAGGAAATctgtGTCAGAGTCAGCGGCTGTAACAGGCctgggttctgggtctggttgTCGGTTAGAGGAcggtggaggtgctgggggtaGTTTGCCCGTCCTTCGGGTCCACCAGAACAGAAGCCAGGCTGTCCTCAGCCACCTGATGGCCAATGCAGATAACTCTGAGCCTGACGATGACTTCTTCAACATGCTCGTCAAGTGCCAGGGTTCCCGTTTGGATGACCAGCGCTGCGCCCCTCCCCCGGCACGTGGCCCCACTGTCCCAGACGAGGACTTCTTCAGCCTCATCATGAGGTCCCAGGCCAAACGCATGGACGAGCAGCGGGTCACCCTGCCCTCTGCAGCACGGCCATGCTCCAACTGAGCCTTGCCCAAGGAGAGGGCCCCCGATGGCGGGGTGAAAACCCAGGAGAGTGGGCCTCTC
>XM_036986417.1
tgcactcacgtaacaggtgttcagcctgccacacagtctcctcgtggactgcaatgtaatcggtgtccaaaaatacagattgttATTAAACTTGATATCGGCCCTAATTaaccggtcgacctctaatgaAACTAGTCTACTTTCGAAATTCGCCATTTTGAATCCAAAATGGGTGACCTGTGTGATTCGTGTAGATCCAATGAGAAAAGTGAGGGGGGGGTGGGGACtttggatcactactggctgtaTGCGAACAAGTGATGTGTGTTTGGagcaatactggctgtatccaaggctcagtCAATCGGTCACATGACAGAATGCAACACGCGcctgaagagagaagagacaccaATGTGCTAGTTTCAGCATCCGCACCCGTTGAAAGAGCGGAGAGGGGAATGGAAGTTTACCAGCTACAGCAGCGCATCCCCTGGACAAAAACGAAAAgAAGACTGCTGAGGAGAGCTGTGGTGGCACTGACAAGGCAAGCCAAGCTCAAACAGTAGGAGAAATGCAGCCTCCTGGACTGACGGGGAACTCTGTCTGAGGATCTCTGTCTGGGGCTGTGGTAATGTCTCTAGACAGACTAACATTTGAAGGACAAACAACCTTACCAAAAATGGAAATATTAGGATTTTCCAACAACTCTTGTGAAGGTTCCGACCACTTCTCCTAGGTCCATCAGATGTTTTTTTCATTATCACAATTTTTCGGATTAACTGGGATCGTCCCACTTATGCTCTTAAATGGATTCCGTTGGCTCTCTGGTTAGCATTCAAGATGAGGACCAGTCCTCTCGTGTCCGATACAGGATGGAGGCGTCTTGTCTGGAGCTGGCCCTGGAGGGGGAGCGGCTCTGTAAGGTGGACGACTACAGCGCAGGGGTGTCCTTCTTCGAGGCGGCCATCCAGGTTGGAACTGAGGACCTGCAGGTGCTGAGTGCCATCTATAGCCAGCTGGGCAACGCCTACTTCCACCTGCATGATTACGGCAAGGCCTTGGAGTTCCACCATCATGACCTCACCTTGACCAGGACCATCAGGGACCAGCAGGGAGAGGCGAAAGCCAGTGGTAACCTAGGCAACACGCTAAAGGTGTTGGGTAGGTTTGATGAGGCTTTGGTCTGCTGTCAGAGGCACTTAGACATCGCCGTGGACCTGCACGACAAGGTGGGGCAGGCGAGGGCGCTGTATAACTTTGGGAACGTGTATCATGCCAAAGGCAAGACCATCTGTTGGAGCGGAGCGGAGCCTGGAGAGTTCCCTGAGGAGGTCATGACTGCACTTAGGAAAGCAGCGGAATACTATGAAGCAAACTTATCCATAGTGAAGGAGCTTGGAGATTGTGCCGCCCAGGGCCGAACATACGGTAACCTTGGCAACACACACTACCTATTAGGAGACTTCCAGAATGCAGTGGCCTCACATGAACAGCGCCTCCAGATTGCCAAGGAGTTTGGCGACCGCTCGGCAGAGAGAAGGGCCTACTGCAACCTGGGGAACGCCTATATCTTTCTGGGGGAATTTGAAGTGGCAGCTGAGCATTACAAGAGGACTCTGCAGCTGGCCAGACtgctgaaggaccgggctgtagAGGCTCAGGCCTGTTACAGTCTGGGAAACACCTACACATTGCTCCAGGACTACGATAGGGCTATAGACTACCACCTCAAACACCTCATCATCGCACAGGACCTCAACGACAGGATCGGTGAGGGCCGGGCGTGCTGGAGTTTAGGGAACGCTCACACAGCCCTGGGGAACCATGACCAGGCCATGCACTTTGCTGAGAAACACCTGGAGATCTCCAAAGAGACTGGGGACCGGAGTGGAGAACTCACAGCCCGTATGAACGTGTCAGACTTGCagatggtcctggggctgagctATAGAACCAACGACTCCACCCTGTCTGAGAACCCCATCAAGGACATCGACTACAACCTGCACGGGGCCAGGCCCAGGAATGGCAGACGGCACAGCATGGAAAACCTGGAGCTCATGAAACTCACCCCAGACAAGATCAACgctcAGAAGTGGAACAGTGACATCCTGACCAAGCAGTCTAAACCCACCCTGGCTAAGAGCTCCTCTAAGCTGTTCTTTGTCAGCCGTCTGCAGGGCAAGAAGCACAAGGCTGGGGGCTCCAGTAAAGTCCTGCAGGACACCAGTAACACCTCACAAACCCCCGCACAGGGACCACAGAAGAGGGCCAGTCCAGACATGCTCGGGGACGAGGGCTTCTTTGACCTGCTGAGTCGTTTCCAGAGCAACAGGATGGACGACCAGCGCTGTTCCATACAGGACAAGAGCTCCTCTGACTCTCCAGCCAGAGCCATGAGGAAATctgtGTCAGAGTCAGCGGCTGTAACAGGCctgggttctgggtctggttgTCGGTTAGAGGAcggtggaggtgctgggggtaGTTTGCCCGTCCTTCGGGTCCACCAGAACAGAAGCCAGGCTGTCCTCAGCCACCTGATGGCCAATGCAGATAACTCTGAGCCTGACGATGACTTCTTCAACATGCTCGTCAAGTGCCAGGGTTCCCGTTTGGATGACCAGCGCTGCGCCCCTCCCCCGGCACGTGGCCCCACTGTCCCAGACGAGGACTTCTTCAGCCTCATCATGAGGTCCCAGGCCAAACGCATGGACGAGCAGCGGGTCACCCTGCCCTCTGCAGCACGGCCATGCTCCAACTGAGCCTTGCCCAAGGAGAGGGCCCCCGATGGCGGGGTGAAAACCCAGGAGAGTGGGCCTCTC

Function

NR:

description
G-protein-signaling modulator 2-like

GO: NA

KEGG:

id description
K15837 GPSM2; G-protein signaling modulator 2

RNA

RNA id representative length rna type GC content exon number start site end site
XM_036986415.1 False 2524 mRNA 0.54 13 79689267 79713549
XM_036986418.1 False 2161 mRNA 0.55 12 79689267 79713549
XM_036986417.1 True 2768 mRNA 0.54 13 79692643 79713549

Neighbor

gene id symbol gene type direction distance location
LOC110530727 LOC106569674 coding upstream 93248 79587340 ~ 79596019 (+)
LOC110530726 LOC106600567 coding upstream 110257 79548127 ~ 79579010 (+)
LOC110530721 LOC106600560 coding upstream 181258 79387596 ~ 79508009 (+)
ncana LOC106569686 coding upstream 341813 79210727 ~ 79347454 (+)
slc25a42 LOC106569683 coding upstream 596011 79066751 ~ 79093256 (+)
LOC110530734 LOC106569665 coding downstream 320075 80033624 ~ 80036953 (+)
LOC110530735 LOC106569664 coding downstream 358014 80071563 ~ 80074536 (+)
acsm3 acsm3 coding downstream 598976 80312525 ~ 80327493 (+)
map6d1 LOC106569659 coding downstream 614982 80328531 ~ 80339721 (+)
LOC110530801 LOC106600593 coding downstream 1184686 80898235 ~ 80924566 (+)
G751145 NA non-coding upstream 21856 79666537 ~ 79667411 (+)
G751121 NA non-coding upstream 48397 79639679 ~ 79640870 (+)
G751122 NA non-coding upstream 48676 79639921 ~ 79640591 (+)
G751120 NA non-coding upstream 58718 79629988 ~ 79630549 (+)
G751119 NA non-coding upstream 62057 79626622 ~ 79627210 (+)
G751127 NA non-coding downstream 1067 79714616 ~ 79716693 (+)
G751165 NA non-coding downstream 9590 79723139 ~ 79723645 (+)
G751197 NA non-coding downstream 84429 79797978 ~ 79801420 (+)
G751202 NA non-coding downstream 94906 79808455 ~ 79810491 (+)
G751228 NA non-coding downstream 140299 79853848 ~ 79854862 (+)
G750935 NA other upstream 491889 79195270 ~ 79197378 (+)
G750854 NA other upstream 709286 78979230 ~ 78979981 (+)
G750533 LOC106569543 other upstream 891719 78797142 ~ 78797548 (+)
G752357 NA other downstream 917761 80631310 ~ 80634052 (+)
G752398 NA other downstream 1028055 80741604 ~ 80741945 (+)
G753205 LOC106569572 other downstream 1773271 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 2069800 81783282 ~ 81802285 (+)
G753337 NA other downstream 2208613 81922162 ~ 81931491 (+)

Expression


Co-expression Network