XLOC_025903 (znf1024)


Basic Information

Item Value
gene id XLOC_025903
gene name znf1024
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 62205858 ~ 62209351 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050769
atgagtgatccagaaccctgcagaattaaacatgaAGACACTGAACAACAAATAGacCTCATTGAAGAGTATGAGGAgattaaagaggaggaacatcatgtcaagaTTGAGGACaatcatttacagactgatggtattttgaaaaagaaaaataagaattgttttacctgcactcagtgtggacaGTGTTGTGAAGGAAAGGccaatcttaagattcacatgagaatccacactggagagaaaccattcacctgcactcagtgtggcaagagtttcagccaatcatcatcccttaataaacacatgatgattcacactggagacagaccatacacatgcactcagtgtgggaagagttttggccAATCATCAAATCTTAGTAAACACatgctgatccacactggagagaaaccgttcacctgcacccagtgtgggaagagtttcagccaatcatcaaaccttaatctacacatgaagatccacactggagagagaccatacacatgcactcaatgcGGGAAAAGCtttagccaatcatcaaaccttaatctacacatgatgctgacccacactggagagaaaccattcacatgtactcacTGTGGGAAGAGCTTTAGCCAATTAtccaaccttaatcaacacatgaagatccacactggaatACGAGAgcatatgtgctttgagtgtgagaagacttttattacagctagaGAATTGAAACGGCACCAGAGGAGTCACACTGCTCGCGTGTACCGCTAA

Function

symbol description
znf1024 Predicted to enable metal ion binding activity.

GO:

id name namespace
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG: NA

ZFIN:

id description
ZDB-GENE-050320-62 Predicted to enable metal ion binding activity.

Ensembl:

ensembl_id ENSDARG00000116815

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050769 True 759 mRNA 0.42 3 62205858 62209351

Neighbor

gene id symbol gene type direction distance location
XLOC_025902 sco1 coding upstream 2147 62196672 ~ 62203711 (+)
XLOC_025901 noxo1a coding upstream 36798 62161249 ~ 62169060 (+)
XLOC_025900 GID4 coding upstream 56030 62140077 ~ 62149828 (+)
XLOC_025899 drc3 coding upstream 66903 62126981 ~ 62138955 (+)
XLOC_025898 NA coding upstream 144020 62054694 ~ 62061838 (+)
XLOC_025905 BX470259.3 coding downstream 9807 62219158 ~ 62226590 (+)
XLOC_025906 zgc:174624 coding downstream 61969 62271320 ~ 62276177 (+)
XLOC_025907 zgc:173575 coding downstream 80673 62290024 ~ 62297374 (+)
XLOC_025908 NA coding downstream 94691 62304042 ~ 62306549 (+)
XLOC_025909 znf1124 coding downstream 108639 62317990 ~ 62324799 (+)
XLOC_025429 BX649540.1 misc upstream 31956822 30248739 ~ 30249036 (+)
XLOC_025890 NA non-coding upstream 821666 61357205 ~ 61384192 (+)
XLOC_025891 NA non-coding upstream 828803 61368489 ~ 61377055 (+)
XLOC_025888 NA non-coding upstream 853852 61338539 ~ 61352006 (+)
XLOC_025913 NA non-coding downstream 159373 62368724 ~ 62384693 (+)
XLOC_025914 NA non-coding downstream 214984 62424335 ~ 62542931 (+)

Expression


Co-expression Network