LOC110530754


Basic Information

Item Value
gene id LOC110530754
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 81196167 ~ 81200421 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614007.2
TCTACACGTGTCCCAGTTATCACCAGGTCATGGTTTAAGAGGACAGGATATAAAGGGGTCAACTGAGACTCCAAAATAACAGCAGAAATAACCACAAGAAGAGGAAATCATCACCCAGGAATGAGAATGAAGAGTGTTGTATCTCTGCTGGTGTTGCtgcactgctgtctgtctggagcCCAGGTCcacaaagacagagatggagTCAGTGTGAATGAGATCCAGCAGGTTGactatgaggacagagagagcagagggaaggaCATTCAGACTGACAAGCAGAGAGCTGAAGCTGCATTAACACACAGCCAGCAAACCTGCCAGCCTGACATCCACACTGTGCTGAGAGAGATGAGCACCATGATGGCAGAGCAGAGAGTTGAGctgagacacacaaagactgaactGGAAGCCATGGAGGCCCGACTGAGAGCCAGTGAGAGCCGACTGACAGACAGTGAGAGCCAAGTGGAGGAACTGAGCAAAATGAATGAAGCACAAGCAGTGAAACTAAACTCCATGGAGACTCGTTCTAACATCACTGAGAGCCACGTTGAAGATCTGAAGAGAAACAGTCATGACAGGAAGGTGGctttctcagcctcactagcagCACCTGGTCAAGGAGGACACACTGGACCCTACAACACTGCAATCACCCTGGTCTACAGAAATATCTACTCAAACATTGGCAATGCTTATAACCCCACTACAGGGATCTTCACAGCACCAGTGAGAGGACTCTACCTCTTCAGGTTTTACATCTATGGAGAGGGTGACAGTTCAGTTCCTACAACTACATTCTTGCATAAGAATGGATATCAGATAGCTACTGCACATGCTCACCAAGCTAGTGGTGGTATTAACTCCTCTAATGGAGTGTCACTGCTGCTGGAGGTAGGAGATGTGGTCTACATGTATCTCTGGGCTGGGAGAAAGATATATGATAGTGAATATCGCCACAGCACCTTCAGTggtcacctgctcttcactatgTAGGAGGGTTATTGAAGGACTCTATCAGTGATCTGTTCTGGAAAATATTCAGAACTTTTAGTAACATTGTCTTAGCGTTGAATGTTCTCCATTTACTCTCTAATAGTTCAAACTAAGGCAGTTCTCAAGGAGAAAAGTAGGTGAAATTTACAAGATTTAAAAATACATATCGTATCCAAGTTTtcaaaaaagaaaaataataacaaaaaatACTCCGAATGAAAATATTAAATTAATCTaaagattatactgtacactgacttCTTTAATTCATGTATAgatgttgaccccccccccctcatcccccccACCTCTTACTTCCTTTTTCTGCTGTAAATTGAAGAGTGGTAAACATTGTGTTGAGTATAATGTCATAAAGAGTTTATCAAAAGAATGACAAAGTGTCATTacacgaacacacaaac

Function

NR:

description
uncharacterized protein LOC110530754

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614007.2 True 1421 mRNA 0.43 4 81196167 81200421

Neighbor

gene id symbol gene type direction distance location
LOC110530753 LOC106600601 coding upstream 7010 81076665 ~ 81189157 (+)
LOC110530752 LOC106569631 coding upstream 120270 81037101 ~ 81075897 (+)
LOC110530803 LOC106569635 coding upstream 230778 80938422 ~ 80965389 (+)
LOC110530801 LOC106600593 coding upstream 271601 80898235 ~ 80924566 (+)
map6d1 LOC106569659 coding upstream 856446 80328531 ~ 80339721 (+)
LOC118965638 NA coding downstream 156538 81356959 ~ 81365769 (+)
LOC110529142 NA coding downstream 216719 81417140 ~ 81418322 (+)
LOC110530755 LOC106569585 coding downstream 217951 81418372 ~ 81444081 (+)
LOC110530757 LOC106569574 coding downstream 420713 81621134 ~ 81632686 (+)
dnaaf6 LOC106569578 coding downstream 432964 81633385 ~ 81636491 (+)
G752772 NA non-coding upstream 25760 81170129 ~ 81170407 (+)
G752844 NA non-coding upstream 29318 81161813 ~ 81166849 (+)
G752838 NA non-coding upstream 51784 81140167 ~ 81144383 (+)
G752837 NA non-coding upstream 57559 81138317 ~ 81138608 (+)
G752820 NA non-coding upstream 81337 81114391 ~ 81114830 (+)
G752980 NA non-coding downstream 12787 81213208 ~ 81214740 (+)
G752981 NA non-coding downstream 14549 81214970 ~ 81215730 (+)
G753005 NA non-coding downstream 77559 81277980 ~ 81279340 (+)
G753007 NA non-coding downstream 82120 81282541 ~ 81283337 (+)
G753037 NA non-coding downstream 153466 81353887 ~ 81397911 (+)
G752398 NA other upstream 454222 80741604 ~ 80741945 (+)
G752357 NA other upstream 562115 80631310 ~ 80634052 (+)
LOC110530726 LOC106600567 other upstream 1626290 79548127 ~ 79579010 (+)
ncana LOC106569686 other upstream 1848719 79210727 ~ 79347454 (+)
G750935 NA other upstream 1998789 79195270 ~ 79197378 (+)
G753205 LOC106569572 other downstream 286399 81486820 ~ 81487610 (+)
sdhc LOC106569582 other downstream 582928 81783282 ~ 81802285 (+)
G753337 NA other downstream 721741 81922162 ~ 81931491 (+)
G754927 NA other downstream 2055318 83255739 ~ 83257866 (+)
G755286 NA other downstream 2428951 83629372 ~ 83629738 (+)

Expression


Co-expression Network