XLOC_025905 (BX470259.3)


Basic Information

Item Value
gene id XLOC_025905
gene name BX470259.3
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007114.7
NCBI id CM002887.2
chromosome length 62628489
location 62219158 ~ 62226590 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00050772
atgagtgatccagaaccctgcagaattaaacatgaAGACACTGAACAACAAATAGaccaAATTGAAGAGAATAAAGAgattaaagaggaggaacatcatgtcaaagtTGAGGACAAaaatcatttacagactgatgatattaagagaaagaaaaacaaaaatagtttcatCTGCACAgagtgtgagaagagtttcagCCAGTTATATCTGCTTAatagacacatgaagatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttaaGTCGATTACaataccttaatcaacacatgaagatccacattGGAGAGAAATTattcacgtgcactcagtgtgggaagagtttcagccaactACAAAACctaaatcaacacatgaggatccacactggggagaaaccatacacatgcactcagtgtgggaggagtttcagcagctcatcaaaccttaatgtacacatgaggatccacactggagacagaccattcacatgcactcagtgtgagaagagtttcagccaattatctcaccttaatgaacacatgaagatccacactggagagagaccgttcacatgcactcagtgtgggaagagttttatcaGCTCATCAAACCTTGATAAACAcgtgaagatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagccgatttCAAAACCTAAATCAacacatgagggtccacactggggagaaaccatacacatgcactcattgtgggaggagtttcagcaGCTCAttaaaccttaataaacacatgaggatccacactggagagaaaccattcacatgcactcagtgtgggaagagtttcagcagctcatcaaaccttaataaacacgtGAAGATCCActgtcagggctcgaaattaaccttttag

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDARG00000116723

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00050772 True 933 mRNA 0.41 2 62219158 62226590

Neighbor

gene id symbol gene type direction distance location
XLOC_025903 znf1024 coding upstream 9807 62205858 ~ 62209351 (+)
XLOC_025902 sco1 coding upstream 15447 62196672 ~ 62203711 (+)
XLOC_025901 noxo1a coding upstream 50098 62161249 ~ 62169060 (+)
XLOC_025900 GID4 coding upstream 69330 62140077 ~ 62149828 (+)
XLOC_025899 drc3 coding upstream 80203 62126981 ~ 62138955 (+)
XLOC_025906 zgc:174624 coding downstream 44730 62271320 ~ 62276177 (+)
XLOC_025907 zgc:173575 coding downstream 63434 62290024 ~ 62297374 (+)
XLOC_025908 NA coding downstream 77452 62304042 ~ 62306549 (+)
XLOC_025909 znf1124 coding downstream 91400 62317990 ~ 62324799 (+)
XLOC_025910 zgc:173575 coding downstream 100742 62327332 ~ 62329712 (+)
XLOC_025429 BX649540.1 misc upstream 31970122 30248739 ~ 30249036 (+)
XLOC_025898 NA non-coding upstream 157320 62054694 ~ 62061838 (+)
XLOC_025890 NA non-coding upstream 834966 61357205 ~ 61384192 (+)
XLOC_025891 NA non-coding upstream 842103 61368489 ~ 61377055 (+)
XLOC_025888 NA non-coding upstream 867152 61338539 ~ 61352006 (+)
XLOC_025913 NA non-coding downstream 142134 62368724 ~ 62384693 (+)
XLOC_025914 NA non-coding downstream 197745 62424335 ~ 62542931 (+)

Expression


Co-expression Network