LOC110530760


Basic Information

Item Value
gene id LOC110530760
gene name NA
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 82105100 ~ 82108513 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XR_005052972.1
GCAAACATTTCACATGTTattctgtctgtccgtccgtctacCTATCTATCATATTCATTGGAGCACCATCTCAACACCATGTCTCTCCTTTTAGGGTTTGGATTGCTGACCTGCATAGCATCATCAGAGCCCAGTGCTGAGACCTCTGTGTTTGTGCAGAAGGGACAGGATGTTCGCCTGAATGTCCAGACAAATGTTCAACTGCAAGATGTTGATGTTCTATATTGGAAGTTTAACAGATCAGTCCGTGTTGTAAAGTACCCCCCAAAAGTTACCTTTGAAAGGTACCGAGGTAGGGCTGAATTTAGTGAGGGAGACTTCTCTCTGCTACTGAAGAACCTCCATGAAGAAGACAGTGGACTTTATGAAGCAGTAGTGTCTGGTAACAATGACAGAAATGTTGCTACGTACGTGTTGGTAGTTCAAGAGAGAGTTGAGCCACCAGTTCTGACAGTGGACTCTTAACTCCACCGTCACTGTCACCTGTAACGTGACTGTGACCTGCAGAGGTCAGAACACCTCTGTCACCTCCAGCTGTAACAGCAGCACCTGCTCTCAGGTGGGAGGAGATAGTAGAGGGGCTGAGACCTCCACTGTCCCCCTGCTCTCTGTGTATGTGGCAGGGAGTTTCATCATCTGTAACCACAGCAACCACGTCAGCTGGGCCAACGACACCAAGGAGATAGTGGAACTCTGTCCAACGAAATGTGTGTCTCCCCCTGCTGGTAGCATGTCTGTGTGCATGCTGAAGATCATCTTGGTGTCTGTGGGGCTGGTCATCATGATCTCTGCTGTCATCACTGTCCACATCAGGCACAGATTCCACTATGGATAGAATCATGTGTGTTGTATTTTTTCGACCTCAGACAAAGTGATTCATTTCTGAAAAAGTAGAGATTTTGTGATGATTTTAATCAGCATTTTATCTCTGCTGTTTTCCTATTTGGAAGAAATGTTGGTCGTACCGGTGTTGACTGCTCTTCCCACATAAAGCCTCCAGTTCCCTCGATGGATGATCGATCAGTCAACCTACTTTTGTTGACAAATTTGACACCTTTTGGAAGCAGACAATGCtctataaggaggatgggatccaccctaATCACTTCTGTGTCTGGATCCTGTCTCAACACTACAAGGCAGCGCTGATGCATTGACTGATCAAATCAAGCTCCTCAAAATGTATTTACTCCCATTAAATAGCATTGATATCATTCTGCCACAGCTTCTCATGTTGATAGGGGCATTGTAAATAGTAATTTTGTGCCTGTTAATTTAATTTCCATTGATAGCTCTGTTAGCTCCCGTTAGCTCTGTTGTTAGCTCCACCTATGCTATTAATAGTTTTACAGTATATCAAGCTATCATTTTGCTACATGTGCTCATAAGCATAGTGTTATTGTTAGTTGTTCTATTGTACTCATTTATCTGAATTCTTATATTAGCTCAGGAACCAGGAAGCCCATTGTGGCTAGCTCATCCAGTTCTATTGACTCTTGTGTCACCATGGATACTCCTGCTGTTTTCAAATCTTGCAGAAGGCTTGGACTGTTACATTTAAATGTGCCTGATGTCTAAACTGGACGTTCTGGGTGCATGACACTAGTCCAGATGTTTTGTTTatctcaacatgcaacaatttcatagattttactgagttacagttcttaTAGGGAAataagtcaatttaaataaatta

Function

NR:

description
SLAM family member 9-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_005052972.1 True 1699 mRNA 0.43 4 82105100 82108513

Neighbor

gene id symbol gene type direction distance location
kirrel1b LOC106569584 coding upstream 70580 81946192 ~ 82034520 (+)
LOC110511052 LOC106569583 coding upstream 182975 81808453 ~ 81922125 (+)
trnar-ucu-2 NA coding upstream 299479 81805548 ~ 81805621 (+)
sdhc LOC106569582 coding upstream 302815 81783282 ~ 81802285 (+)
atp1a2a LOC100136182 coding upstream 325130 81746800 ~ 81779970 (+)
LOC110530764 NA coding downstream 129203 82237716 ~ 82252379 (+)
LOC110530769 LOC106569594 coding downstream 204781 82313294 ~ 82320766 (+)
uck2b LOC106569706 coding downstream 232704 82341217 ~ 82358286 (+)
czib cssa14h1orf123 coding downstream 250690 82359203 ~ 82361901 (+)
scp2a scp2 coding downstream 253606 82362119 ~ 82384858 (+)
G753502 LOC106569695 non-coding upstream 18813 82082317 ~ 82086287 (+)
G753490 NA non-coding upstream 39706 82065032 ~ 82065394 (+)
G753474 NA non-coding upstream 78352 82026549 ~ 82026748 (+)
G753471 NA non-coding upstream 90471 82014429 ~ 82014629 (+)
G753503 NA non-coding downstream 102988 82211501 ~ 82225706 (+)
G753563 NA non-coding downstream 127498 82236011 ~ 82237251 (+)
G753584 NA non-coding downstream 177587 82286100 ~ 82286542 (+)
G753585 NA non-coding downstream 178066 82286579 ~ 82286949 (+)
G753592 NA non-coding downstream 257311 82365824 ~ 82366453 (+)
G753337 NA other upstream 178941 81922162 ~ 81931491 (+)
G753205 LOC106569572 other upstream 617490 81486820 ~ 81487610 (+)
G752398 NA other upstream 1363155 80741604 ~ 80741945 (+)
G752357 NA other upstream 1471048 80631310 ~ 80634052 (+)
G754927 NA other downstream 1147226 83255739 ~ 83257866 (+)
G755286 NA other downstream 1520859 83629372 ~ 83629738 (+)
G755277 NA other downstream 1544532 83653045 ~ 83654438 (+)
G755298 NA other downstream 1549584 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 1677447 83785960 ~ 83788580 (+)

Expression


Co-expression Network