LOC110530769 (LOC106569594)


Basic Information

Item Value
gene id LOC110530769
gene name LOC106569594
gene type coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048572.1
NCBI id CM023226.2
chromosome length 91622588
location 82313294 ~ 82320766 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>XM_021614033.2
ACGGAGGTTTATATACCCTCAAAGTAAACTTCCGAAACTTTTAGAAGCGTCAGTACTGAGTTGAGTTGGCTATGATTTAAATAGGCCTATTTATCTCTTTACAAACGTTTCACACATTTAGTCTCATTGAGGCTATCCAAACTTGTCAGGTCAGTTAGTCGGTCCATAATTTATTTGAAAAGTAATTTTTGGCAACTTGCAGGAGCATCATCATGTATCCAGAATCTACAGTGGGgtgcaGCTTTGAGGAGTGCAGTGCTACAGCTGAATGGCTCCTGTCCCGGACAGAGATACGCCCCCTGGTGGGGATAGTTTGTGGCTCAGGCTTGGGAGGCTTGGCAGAAATGCTAAAAGACCAGATGGCATTTAAATACAGCGACATTCCTAACTTTCCCCAGAGCACAGTGCATGGTCACGCTGGCAGGTTGGTGTTTGGCATGCTGAAAGGGAAAGCATGTGTTTGTATGCAGGGAAGATTCCATCTCTATGAGGGATACCCCATCCATAAGGTCACAATGCCCATGCGGATTTTCAAGCTGCTGGGTGTGGAAACTGTCATCCTGACCAATGCAGCTGGAGGCCTCAATCAAGACTACAAGGTTGGGGACATCATGATCATCAAAGACCACATCAACATGCCTGGGTTCGCTGGGAACAACCCACTGGCAGGACCCAATGATGAGAGGTTCGGGGTTCGGTTCCCCTCCATGTCTGATGCGTACGACAGGGAACTTCTGCAGCTGGCACAAGGTGTGGGGGCGGAGCTTGGCTTTGCAGACTTCCTGAGAGAGGGAGTTTACTGCGTCCTGGGCGGGCCCTCGTTCGAAACCATCGCTGAGTGTCGTATGATGAACAGACTGGGGGCTGACGCTGTGGGCATGAGTACGGTGCACGAGGTGATTGTAGCGCGTCACTGTGGGATGCGTGTGTTCGCCCTGTCCCTGATCACCAACCAGGCTGTGATGGACTACGACAGCCAGGAGAAGGCCAACCACGAGGAGGTCCTGGAGACAGGCCAGCTGAGGGCAAAGCAGCTAGAGCGACTGGTGTCCAACATGGTGACCCATATAGAGCACAACAATAACGACGCCTGATAACTCTGACTGAATGTGGTTACACCGTGTGTGTATGGGGGAAGGGGGGCATTCCGTAATCACCCTATTGTACGTCCCCTAGATATCTGGCCACGCTGTTCTTTTTCTGTACTTTAACATTCTTCAAGGTAGCTGTTTGTTGACAACATGACTCATTGTTTGTGTTATGGAAACATGACAATTCGGAGTAAAGTACTATTATTTATGAGCCCTGCACTAAACGTTTATAAATATAGAGCTGTATTGAGGTGAACTGACCCGGTGCACTGACAATTTAATGTGTTAactttatatttatttttgttcagttcagAAATACTTGCACGTTGTACATTTTCTAACAAGTGTGACTAATATGTAGATTTTAAAATTAGATGATATAGGTGAAGTAAATTACCAAAACGTAAGGGTGTTCCCATAATATAGTGGGCTCTAAAGTGCGACCAATTTGGTCGCAAATGCAACAAAATATTTTCCCGTGCGAACTGCAGTTTTAATTTTGGAGCACAGAGAGAATGGTAAAGGGATAGCTTCTTCAGGAGATCCGTGATTCTAGTAAAGATGGTTCAGTATGAAGATGAttagaaactgcttctccaatagaaatcccagaTCATGCATGCATGCGATGTCCTggcaaagttagctagctaaactcaTGTGCGGAAACACATCATTGGGTCGAACTGTCGTGTTGCACTGAATTGCGCATTTGCATtccgtcaaatcaaaggcactccttcgataTAAATGAAAACGTGtaagtttgtcactttcacaaggTTATGACATGTTCAGCTACTTAAAACATTGGCTCGAATCTAGATTGAAAATCGAGAAAATTAACGACCAAGGAAGATTTTTCCACTCATTGGTttcccaaaccccagtctggtctgtcgAGTCGGCTTTGCGCCACGTTCCTGGAACTATCACAATGTTGTGCCTCtcttgagtaaaaaaaaaaagccactTCCGGTAATGGCCGTACCCCTTTCTAGTCAAAACCATGAATGTCAGATCTTTTGCCTGTAGACATCACAAACTTGACGCTCTTAAAGAGACACTGTACCATTTACAATGTAATGCATCTCAATAAGAAAATAGTGCTTTTGCATAATGTAGAAACCTTATATTCCCCACATGACCAGTATTTGTATCAACATTTTAGCTTTTTATAATAAACCAATGTATTTACAGCATAACATATTCGTTTCTAGGGCACAACATGTGCTTCAGAAATATAATTAATTTAGGCTATATATGCTCTATAAAAAAACGTTGCACTTCTGATTTTTTACAGTTGGGAGCACCAGTGCTACCCATGACATGTTTGAATTTAGACTGACTGTAACGTGCTGTAAAGTAGCAGTGTGTTGGTGTATTAACAATTATGTTCTCTGTATATTTTTAATACTTATTTATAGAAGCACTTTTTTATCGTGTAATGGATGCTTTTTAGTCAACGTCTTAAAAAGGGGTTAAACTAGATTATTTTACCTTCCAAACGATGGGTAGTTTTAGCTTTGCCTTTATAAGAATGCTCATGAATGTGTATATCGATGGGGATTGAAAGGTGAATATAGGGTATTTTGTTGGTGCTACACAAGTCTTACTGTCACAATAAACGGAGTCAACTTGATA

Function

NR:

description
purine nucleoside phosphorylase-like isoform X1

GO:

id name namespace
GO:0009116 nucleoside metabolic process biological_process
GO:0004731 purine-nucleoside phosphorylase activity molecular_function

KEGG:

id description
K03783 punA, PNP; purine-nucleoside phosphorylase

RNA

RNA id representative length rna type GC content exon number start site end site
XM_021614033.2 True 2738 mRNA 0.43 6 82313294 82320766

Neighbor

gene id symbol gene type direction distance location
LOC110530764 NA coding upstream 60915 82237716 ~ 82252379 (+)
LOC110530760 NA coding upstream 204781 82105100 ~ 82108513 (+)
kirrel1b LOC106569584 coding upstream 278774 81946192 ~ 82034520 (+)
LOC110511052 LOC106569583 coding upstream 391169 81808453 ~ 81922125 (+)
trnar-ucu-2 NA coding upstream 507673 81805548 ~ 81805621 (+)
uck2b LOC106569706 coding downstream 20451 82341217 ~ 82358286 (+)
czib cssa14h1orf123 coding downstream 38437 82359203 ~ 82361901 (+)
scp2a scp2 coding downstream 41353 82362119 ~ 82384858 (+)
LOC110530773 LOC106569595 coding downstream 205184 82525950 ~ 82535140 (+)
LOC110530778 LOC106590523 coding downstream 343429 82664195 ~ 82665021 (+)
G753585 NA non-coding upstream 26345 82286579 ~ 82286949 (+)
G753584 NA non-coding upstream 26752 82286100 ~ 82286542 (+)
G753563 NA non-coding upstream 76043 82236011 ~ 82237251 (+)
G753503 NA non-coding upstream 87588 82211501 ~ 82225706 (+)
G753502 LOC106569695 non-coding upstream 227007 82082317 ~ 82086287 (+)
G753592 NA non-coding downstream 45058 82365824 ~ 82366453 (+)
G753631 NA non-coding downstream 52794 82373560 ~ 82374769 (+)
G753658 NA non-coding downstream 120709 82441475 ~ 82441819 (+)
G753662 NA non-coding downstream 147021 82467787 ~ 82468327 (+)
G753664 NA non-coding downstream 152005 82472771 ~ 82473141 (+)
G753337 NA other upstream 387135 81922162 ~ 81931491 (+)
sdhc LOC106569582 other upstream 511009 81783282 ~ 81802285 (+)
G753205 LOC106569572 other upstream 825684 81486820 ~ 81487610 (+)
G752398 NA other upstream 1571349 80741604 ~ 80741945 (+)
G752357 NA other upstream 1679242 80631310 ~ 80634052 (+)
G754927 NA other downstream 934973 83255739 ~ 83257866 (+)
G755286 NA other downstream 1308606 83629372 ~ 83629738 (+)
G755277 NA other downstream 1332279 83653045 ~ 83654438 (+)
G755298 NA other downstream 1337331 83658097 ~ 83660046 (+)
LOC110529145 LOC106569623 other downstream 1465194 83785960 ~ 83788580 (+)

Expression


Co-expression Network